RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Defb9Q8R2I6 67 aa3.78□□□□□ -1.8
Lig4-202ENSMUST00000170033 Hspg2Q05793 3707 aaKnown RBP3.78□□□□□ -1.8
Lig4-202ENSMUST00000170033 Gm16253D3Z167 63 aa3.78□□□□□ -1.8
Lig4-202ENSMUST00000170033 TnxbO35452 4006 aa3.78□□□□□ -1.81
Lig4-202ENSMUST00000170033 CriptO70333 101 aa3.77□□□□□ -1.81
Lig4-202ENSMUST00000170033 Gpr15lA0A0B4J1N3 78 aa3.77□□□□□ -1.81
Lig4-202ENSMUST00000170033 HrnrQ8VHD8 2496 aa3.76□□□□□ -1.81
Lig4-202ENSMUST00000170033 Gm36176A0A1W2P8D5 158 aa3.76□□□□□ -1.81
Lig4-202ENSMUST00000170033 Defb39Q70KL3 74 aa3.76□□□□□ -1.81
Lig4-202ENSMUST00000170033 AtrQ9JKK8 2635 aa3.76□□□□□ -1.81
Lig4-202ENSMUST00000170033 Tnp2P11378 117 aa3.75□□□□□ -1.81
Lig4-202ENSMUST00000170033 Gm10267M0QWD8 85 aa3.75□□□□□ -1.81
Lig4-202ENSMUST00000170033 Dnah6E9Q0B6 4144 aa3.74□□□□□ -1.81
Lig4-202ENSMUST00000170033 Dnah14A0A140LIJ4 4489 aa3.73□□□□□ -1.81
Lig4-202ENSMUST00000170033 Dnah7bL7N1Y0 4068 aa3.73□□□□□ -1.81
Lig4-202ENSMUST00000170033 Srrm2Q8BTI8 2703 aaKnown RBP3.72□□□□□ -1.81
Lig4-202ENSMUST00000170033 Gm17349F7BGH6 99 aa3.72□□□□□ -1.81
Lig4-202ENSMUST00000170033 9530053A07RikE9PVG8 2581 aa3.71□□□□□ -1.82
Lig4-202ENSMUST00000170033 Ndufb1P0DN34 57 aa3.71□□□□□ -1.82
Lig4-202ENSMUST00000170033 Tenm2Q9WTS5 2764 aa3.71□□□□□ -1.82
Lig4-202ENSMUST00000170033 Gm10642Q3TWM1 71 aa3.69□□□□□ -1.82
Lig4-202ENSMUST00000170033 Stab1Q8R4Y4 2571 aa3.68□□□□□ -1.82
Lig4-202ENSMUST00000170033 Huwe1Q7TMY8 4377 aaKnown RBP3.67□□□□□ -1.82
Lig4-202ENSMUST00000170033 Nsd1O88491 2588 aaKnown RBP3.66□□□□□ -1.82
Lig4-202ENSMUST00000170033 Uqcr11Q9CPX8 56 aa3.66□□□□□ -1.82
Lig4-202ENSMUST00000170033 Fras1Q80T14 4010 aa3.66□□□□□ -1.82
Lig4-202ENSMUST00000170033 Adm2Q7TNK8 150 aa3.66□□□□□ -1.82
Lig4-202ENSMUST00000170033 RetnlbQ99P86 105 aa3.66□□□□□ -1.82
Lig4-202ENSMUST00000170033 Krtap13O88375 197 aa3.66□□□□□ -1.82
Lig4-202ENSMUST00000170033 Col6a5A6H584 2640 aa3.65□□□□□ -1.82
Lig4-202ENSMUST00000170033 Notch1Q01705 2531 aa3.65□□□□□ -1.83
Lig4-202ENSMUST00000170033 Rps29P62274 56 aa3.65□□□□□ -1.83
Lig4-202ENSMUST00000170033 Krtap3-2Q9D638 99 aa3.64□□□□□ -1.83
Lig4-202ENSMUST00000170033 Krtap3-3Q9D7P0 99 aa3.64□□□□□ -1.83
Lig4-202ENSMUST00000170033 Wfdc3Q14AE4 130 aa3.64□□□□□ -1.83
Lig4-202ENSMUST00000170033 Igsf10Q3V1M1 2594 aa3.64□□□□□ -1.83
Lig4-202ENSMUST00000170033 Hivep1Q03172 2688 aa3.64□□□□□ -1.83
Lig4-202ENSMUST00000170033 Krtap10-10A0A1W2P7T6 217 aa3.64□□□□□ -1.83
Lig4-202ENSMUST00000170033 Gm7137J3QMW1 236 aa3.63□□□□□ -1.83
Lig4-202ENSMUST00000170033 Dnah10D3YYQ8 4591 aa3.63□□□□□ -1.83
Lig4-202ENSMUST00000170033 Krtap14O08640 167 aa3.61□□□□□ -1.83
Lig4-202ENSMUST00000170033 PlecQ9QXS1 4691 aaKnown RBP3.61□□□□□ -1.83
Lig4-202ENSMUST00000170033 Dnah11E9Q7N9 4488 aa3.6□□□□□ -1.83
Lig4-202ENSMUST00000170033 Dnah9B1AR51 4484 aa3.6□□□□□ -1.83
Lig4-202ENSMUST00000170033 Gm21798J3QNU5 87 aa3.59□□□□□ -1.83
Lig4-202ENSMUST00000170033 Gm9918Q8BUR5 174 aa3.59□□□□□ -1.83
Lig4-202ENSMUST00000170033 Defb13Q8R2I4 64 aa3.59□□□□□ -1.84
Lig4-202ENSMUST00000170033 2310050C09RikG5E8Z3 280 aa3.57□□□□□ -1.84
Lig4-202ENSMUST00000170033 Dnah2P0C6F1 4456 aa3.57□□□□□ -1.84
Lig4-202ENSMUST00000170033 Dnah7cA0A087WR13 4024 aa3.56□□□□□ -1.84
Lig4-202ENSMUST00000170033 Megf8P60882 2789 aa3.56□□□□□ -1.84
Lig4-202ENSMUST00000170033 A930033H14RikG5E8X6 103 aa3.56□□□□□ -1.84
Lig4-202ENSMUST00000170033 Gm9508A0A1W2P7W0 230 aa3.56□□□□□ -1.84
Lig4-202ENSMUST00000170033 Fam229aB2KGE5 128 aa3.56□□□□□ -1.84
Lig4-202ENSMUST00000170033 Ly6g6cQ9Z1Q4 126 aa3.56□□□□□ -1.84
Lig4-202ENSMUST00000170033 VwfQ8CIZ8 2813 aa3.55□□□□□ -1.84
Lig4-202ENSMUST00000170033 Krtap31-1Q9D644 177 aa3.55□□□□□ -1.84
Lig4-202ENSMUST00000170033 1600014C23RikQ9DAX4 101 aa3.55□□□□□ -1.84
Lig4-202ENSMUST00000170033 Vps13dB1ART2 4390 aa3.55□□□□□ -1.84
Lig4-202ENSMUST00000170033 ApobE9Q414 4505 aa3.54□□□□□ -1.84
Lig4-202ENSMUST00000170033 PrkdcP97313 4128 aa3.53□□□□□ -1.84
Lig4-202ENSMUST00000170033 4930507D05RikQ8C9C9 103 aa3.53□□□□□ -1.84
Lig4-202ENSMUST00000170033 Defb1P56386 69 aa3.52□□□□□ -1.85
Lig4-202ENSMUST00000170033 Hectd4E9Q2E4 4418 aa3.52□□□□□ -1.85
Lig4-202ENSMUST00000170033 Stab2Q8R4U0 2559 aa3.52□□□□□ -1.85
Lig4-202ENSMUST00000170033 Anapc11Q9CPX9 84 aa3.52□□□□□ -1.85
Lig4-202ENSMUST00000170033 2310079G19RikQ9D6L6 185 aa3.52□□□□□ -1.85
Lig4-202ENSMUST00000170033 Dnah7aE9Q0T8 4024 aa3.52□□□□□ -1.85
Lig4-202ENSMUST00000170033 Gm3880A0A1B0GSB3 72 aa3.51□□□□□ -1.85
Lig4-202ENSMUST00000170033 FasnP19096 2504 aaKnown RBP3.51□□□□□ -1.85
Lig4-202ENSMUST00000170033 Gm5965D3Z724 196 aa3.5□□□□□ -1.85
Lig4-202ENSMUST00000170033 Muc6Q80T03 2850 aa3.5□□□□□ -1.85
Lig4-202ENSMUST00000170033 A0A1Y7VJH8 109 aa3.5□□□□□ -1.85
Lig4-202ENSMUST00000170033 Spaca4Q80ZQ0 127 aa3.5□□□□□ -1.85
Lig4-202ENSMUST00000170033 Pkd1O08852 4293 aa3.49□□□□□ -1.85
Lig4-202ENSMUST00000170033 Gm9507D3Z5T3 223 aa3.48□□□□□ -1.85
Lig4-202ENSMUST00000170033 Gm10999F6Q4M4 69 aa3.46□□□□□ -1.86
Lig4-202ENSMUST00000170033 FcgbpE9Q0B5 2583 aa3.44□□□□□ -1.86
Lig4-202ENSMUST00000170033 Krtap31-2Q8CAY5 177 aa3.44□□□□□ -1.86
Lig4-202ENSMUST00000170033 Pkhd1l1Q80ZA4 4249 aa3.44□□□□□ -1.86
Lig4-202ENSMUST00000170033 D6Ertd527eA0A0N4SWI3 464 aa3.42□□□□□ -1.86
Lig4-202ENSMUST00000170033 Gm20537G3UYK7 97 aa3.42□□□□□ -1.86
Lig4-202ENSMUST00000170033 Gm4491E0CX42 125 aa3.4□□□□□ -1.86
Lig4-202ENSMUST00000170033 Pkd1l1Q8R526 2615 aa3.4□□□□□ -1.87
Lig4-202ENSMUST00000170033 SacsQ9JLC8 4582 aa3.39□□□□□ -1.87
Lig4-202ENSMUST00000170033 Krtap3-1A2A591 98 aa3.38□□□□□ -1.87
Lig4-202ENSMUST00000170033 Dnah5Q8VHE6 4621 aa3.37□□□□□ -1.87
Lig4-202ENSMUST00000170033 Cox6b2Q80ZN9 88 aa3.37□□□□□ -1.87
Lig4-202ENSMUST00000170033 Gm5767A0A0J9YTU8 78 aa3.35□□□□□ -1.87
Lig4-202ENSMUST00000170033 Krtap28-10A0A1Y7VP58 119 aa3.35□□□□□ -1.87
Lig4-202ENSMUST00000170033 Fat2Q5F226 4351 aa3.34□□□□□ -1.87
Lig4-202ENSMUST00000170033 Lrp1bQ9JI18 4599 aa3.32□□□□□ -1.88
Lig4-202ENSMUST00000170033 Pkhd1E9PZ36 4059 aa3.32□□□□□ -1.88
Lig4-202ENSMUST00000170033 Dync1h1Q9JHU4 4644 aaKnown RBP3.32□□□□□ -1.88
Lig4-202ENSMUST00000170033 Gm19668J3QMD1 248 aa3.31□□□□□ -1.88
Lig4-202ENSMUST00000170033 Camk2n1Q6QWF9 78 aa3.31□□□□□ -1.88
Lig4-202ENSMUST00000170033 Krtap10-4Q08EG8 221 aa3.31□□□□□ -1.88
Lig4-202ENSMUST00000170033 Gm17416Q30KP4 66 aa3.3□□□□□ -1.88
Lig4-202ENSMUST00000170033 Stard9Q80TF6 4561 aa3.3□□□□□ -1.88
Lig4-202ENSMUST00000170033 Gm9955Q8CEJ8 102 aa3.29□□□□□ -1.88
Retrieved 100 of 22,080 RNA–protein pairs in 73.2 ms