RNA–Protein interactions for RNA: ENSMUST00000155195.2

Synpo-211, Transcript of Synaptopodin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Synpo, Length 4,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Synpo-211ENSMUST00000155195 Odf3bQ5M8M2 238 aa7.45□□□□□ -1.22
Synpo-211ENSMUST00000155195 Rnase13Q5GAM7 153 aa7.42□□□□□ -1.22
Synpo-211ENSMUST00000155195 2310050C09RikG5E8Z3 280 aa7.4□□□□□ -1.22
Synpo-211ENSMUST00000155195 Krtap10-4Q08EG8 221 aa7.4□□□□□ -1.23
Synpo-211ENSMUST00000155195 Fbn1Q61554 2873 aaKnown RBP7.39□□□□□ -1.23
Synpo-211ENSMUST00000155195 2310034C09RikQ9D746 214 aa7.39□□□□□ -1.23
Synpo-211ENSMUST00000155195 Gm21798J3QNU5 87 aa7.38□□□□□ -1.23
Synpo-211ENSMUST00000155195 Krtap13O88375 197 aa7.37□□□□□ -1.23
Synpo-211ENSMUST00000155195 Cmya5Q70KF4 3739 aa7.36□□□□□ -1.23
Synpo-211ENSMUST00000155195 Krtap29-1A2A5X4 342 aa7.35□□□□□ -1.23
Synpo-211ENSMUST00000155195 Gm20538F6Z9R1 75 aa7.32□□□□□ -1.24
Synpo-211ENSMUST00000155195 Gm16253D3Z167 63 aa7.3□□□□□ -1.24
Synpo-211ENSMUST00000155195 Gm9821Q8K076 103 aa7.3□□□□□ -1.24
Synpo-211ENSMUST00000155195 Krtap10-10A0A1W2P7T6 217 aa7.25□□□□□ -1.25
Synpo-211ENSMUST00000155195 Col7a1Q63870 2944 aa7.24□□□□□ -1.25
Synpo-211ENSMUST00000155195 Krtap14O08640 167 aa7.24□□□□□ -1.25
Synpo-211ENSMUST00000155195 Gm37013Q8K491 104 aa7.24□□□□□ -1.25
Synpo-211ENSMUST00000155195 CriptO70333 101 aa7.23□□□□□ -1.25
Synpo-211ENSMUST00000155195 Gm9955Q8CEJ8 102 aa7.23□□□□□ -1.25
Synpo-211ENSMUST00000155195 VwfQ8CIZ8 2813 aa7.22□□□□□ -1.25
Synpo-211ENSMUST00000155195 Tenm2Q9WTS5 2764 aa7.19□□□□□ -1.26
Synpo-211ENSMUST00000155195 Gm4491E0CX42 125 aa7.16□□□□□ -1.26
Synpo-211ENSMUST00000155195 Csmd2V9GX34 3611 aa7.15□□□□□ -1.26
Synpo-211ENSMUST00000155195 Gm2696A0A1W2P709 240 aa7.12□□□□□ -1.27
Synpo-211ENSMUST00000155195 Tnp2P11378 117 aa7.11□□□□□ -1.27
Synpo-211ENSMUST00000155195 Pla2g10Q9QXX3 151 aa7.09□□□□□ -1.27
Synpo-211ENSMUST00000155195 Ank2Q8C8R3 3898 aa7.06□□□□□ -1.28
Synpo-211ENSMUST00000155195 Gm3880A0A1B0GSB3 72 aa7.05□□□□□ -1.28
Synpo-211ENSMUST00000155195 Spink7Q6IE32 76 aa7.05□□□□□ -1.28
Synpo-211ENSMUST00000155195 Gm2310J3QNJ2 377 aa7.05□□□□□ -1.28
Synpo-211ENSMUST00000155195 Krtap15-1Q9QZU5 150 aa7.05□□□□□ -1.28
Synpo-211ENSMUST00000155195 Muc6Q80T03 2850 aa7.04□□□□□ -1.28
Synpo-211ENSMUST00000155195 SmcpP15265 143 aa7.02□□□□□ -1.29
Synpo-211ENSMUST00000155195 Fam229aB2KGE5 128 aa7□□□□□ -1.29
Synpo-211ENSMUST00000155195 Sec61bQ9CQS8 96 aaKnown RBP6.99□□□□□ -1.29
Synpo-211ENSMUST00000155195 Gm5767A0A0J9YTU8 78 aa6.94□□□□□ -1.3
Synpo-211ENSMUST00000155195 Megf8P60882 2789 aa6.92□□□□□ -1.3
Synpo-211ENSMUST00000155195 Gm3646F6S692 53 aa6.9□□□□□ -1.31
Synpo-211ENSMUST00000155195 CubnQ9JLB4 3623 aa6.89□□□□□ -1.31
Synpo-211ENSMUST00000155195 Rpl37Q9D823 97 aa6.88□□□□□ -1.31
Synpo-211ENSMUST00000155195 Camk2n1Q6QWF9 78 aa6.86□□□□□ -1.31
Synpo-211ENSMUST00000155195 Rps29P62274 56 aa6.85□□□□□ -1.31
Synpo-211ENSMUST00000155195 BC029722A0A0N4SW31 51 aa6.84□□□□□ -1.31
Synpo-211ENSMUST00000155195 Romo1P60603 79 aa6.78□□□□□ -1.32
Synpo-211ENSMUST00000155195 LystP97412 3788 aa6.78□□□□□ -1.32
Synpo-211ENSMUST00000155195 4933415A04RikQ9D443 101 aa6.76□□□□□ -1.33
Synpo-211ENSMUST00000155195 Gm19426M0QWC7 77 aa6.73□□□□□ -1.33
Synpo-211ENSMUST00000155195 1700042G07RikB1AUF7 90 aa6.7□□□□□ -1.34
Synpo-211ENSMUST00000155195 Cox6b2Q80ZN9 88 aa6.68□□□□□ -1.34
Synpo-211ENSMUST00000155195 Gm10382Q3V0T5 144 aa6.68□□□□□ -1.34
Synpo-211ENSMUST00000155195 Gm9918Q8BUR5 174 aa6.68□□□□□ -1.34
Synpo-211ENSMUST00000155195 Gm5965D3Z724 196 aa6.66□□□□□ -1.34
Synpo-211ENSMUST00000155195 D6Ertd527eA0A0N4SWI3 464 aa6.64□□□□□ -1.35
Synpo-211ENSMUST00000155195 Xirp2Q4U4S6 3784 aa6.64□□□□□ -1.35
Synpo-211ENSMUST00000155195 Dnah14A0A140LIJ4 4489 aa6.63□□□□□ -1.35
Synpo-211ENSMUST00000155195 BsnO88737 3942 aa6.6□□□□□ -1.35
Synpo-211ENSMUST00000155195 Gm9736A0A1W2P7N1 277 aa6.47□□□□□ -1.37
Synpo-211ENSMUST00000155195 Hspg2Q05793 3707 aaKnown RBP6.45□□□□□ -1.38
Synpo-211ENSMUST00000155195 2310057N15RikQ9D6T8 200 aa6.43□□□□□ -1.38
Synpo-211ENSMUST00000155195 Dnah10D3YYQ8 4591 aa6.4□□□□□ -1.38
Synpo-211ENSMUST00000155195 A930033H14RikG5E8X6 103 aa6.4□□□□□ -1.39
Synpo-211ENSMUST00000155195 2310079G19RikQ9D6L6 185 aa6.39□□□□□ -1.39
Synpo-211ENSMUST00000155195 Huwe1Q7TMY8 4377 aaKnown RBP6.37□□□□□ -1.39
Synpo-211ENSMUST00000155195 Gm21887J3QQ04 176 aa6.29□□□□□ -1.4
Synpo-211ENSMUST00000155195 Csmd3Q80T79 3707 aa6.29□□□□□ -1.4
Synpo-211ENSMUST00000155195 Krtap19-5O08632 62 aa6.29□□□□□ -1.4
Synpo-211ENSMUST00000155195 Gm11939A2A592 99 aa6.28□□□□□ -1.4
Synpo-211ENSMUST00000155195 Gm40193A0A1B0GT39 78 aa6.27□□□□□ -1.41
Synpo-211ENSMUST00000155195 PlecQ9QXS1 4691 aaKnown RBP6.23□□□□□ -1.41
Synpo-211ENSMUST00000155195 Dnah17Q69Z23 4481 aa6.23□□□□□ -1.41
Synpo-211ENSMUST00000155195 Gm20537G3UYK7 97 aa6.22□□□□□ -1.41
Synpo-211ENSMUST00000155195 Tnp1P10856 55 aa6.19□□□□□ -1.42
Synpo-211ENSMUST00000155195 Dnah5Q8VHE6 4621 aa6.18□□□□□ -1.42
Synpo-211ENSMUST00000155195 Gm17416Q30KP4 66 aa6.18□□□□□ -1.42
Synpo-211ENSMUST00000155195 Dnah7bL7N1Y0 4068 aa6.15□□□□□ -1.42
Synpo-211ENSMUST00000155195 Krtap3-2Q9D638 99 aa6.13□□□□□ -1.43
Synpo-211ENSMUST00000155195 Krtap3-3Q9D7P0 99 aa6.13□□□□□ -1.43
Synpo-211ENSMUST00000155195 Vps13dB1ART2 4390 aa6.13□□□□□ -1.43
Synpo-211ENSMUST00000155195 Ndufaf8A2AMZ4 74 aa6.12□□□□□ -1.43
Synpo-211ENSMUST00000155195 Dnah11E9Q7N9 4488 aa6.09□□□□□ -1.44
Synpo-211ENSMUST00000155195 2210017I01RikA0A0A6YVV1 95 aa6.08□□□□□ -1.44
Synpo-211ENSMUST00000155195 TnxbO35452 4006 aa6.06□□□□□ -1.44
Synpo-211ENSMUST00000155195 Dnah9B1AR51 4484 aa6.06□□□□□ -1.44
Synpo-211ENSMUST00000155195 Stard9Q80TF6 4561 aa6.06□□□□□ -1.44
Synpo-211ENSMUST00000155195 B930094E09RikQ8C4T2 136 aa6.05□□□□□ -1.44
Synpo-211ENSMUST00000155195 Ryr1E9PZQ0 5035 aa6□□□□□ -1.45
Synpo-211ENSMUST00000155195 Gm10318A0A1W2P728 225 aa5.98□□□□□ -1.45
Synpo-211ENSMUST00000155195 Gm17402F6Z0L5 76 aa5.95□□□□□ -1.46
Synpo-211ENSMUST00000155195 PrkdcP97313 4128 aa5.94□□□□□ -1.46
Synpo-211ENSMUST00000155195 Gm9112A2AI92 75 aa5.94□□□□□ -1.46
Synpo-211ENSMUST00000155195 Dync2h1Q45VK7 4306 aa5.93□□□□□ -1.46
Synpo-211ENSMUST00000155195 Crct1Q6PAI5 102 aa5.92□□□□□ -1.46
Synpo-211ENSMUST00000155195 Dnah6E9Q0B6 4144 aa5.91□□□□□ -1.46
Synpo-211ENSMUST00000155195 Kmt2aP55200 3966 aa5.9□□□□□ -1.47
Synpo-211ENSMUST00000155195 Krtap13-1Q8K198 168 aa5.9□□□□□ -1.47
Synpo-211ENSMUST00000155195 ApobE9Q414 4505 aa5.86□□□□□ -1.47
Synpo-211ENSMUST00000155195 Lrp1bQ9JI18 4599 aa5.86□□□□□ -1.47
Synpo-211ENSMUST00000155195 Dnah3Q8BW94 4083 aa5.85□□□□□ -1.47
Synpo-211ENSMUST00000155195 Dync1h1Q9JHU4 4644 aaKnown RBP5.84□□□□□ -1.47
Synpo-211ENSMUST00000155195 Ryr3A2AGL3 4863 aa5.83□□□□□ -1.48
Retrieved 100 of 22,080 RNA–protein pairs in 137.5 ms