RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 FlncQ8VHX6 2726 aaKnown RBP8.26□□□□□ -1.09
Pcdha9-201ENSMUST00000115659 Lrrc37aB1AWG4 3215 aa8.25□□□□□ -1.09
Pcdha9-201ENSMUST00000115659 A930033H14RikG5E8X6 103 aa8.25□□□□□ -1.09
Pcdha9-201ENSMUST00000115659 BptfA2A654 3036 aaKnown RBP8.24□□□□□ -1.09
Pcdha9-201ENSMUST00000115659 Gm20537G3UYK7 97 aa8.24□□□□□ -1.09
Pcdha9-201ENSMUST00000115659 Tnp1P10856 55 aa8.23□□□□□ -1.09
Pcdha9-201ENSMUST00000115659 Gm5965D3Z724 196 aa8.23□□□□□ -1.09
Pcdha9-201ENSMUST00000115659 Wdfy4E9Q2M9 3149 aa8.21□□□□□ -1.1
Pcdha9-201ENSMUST00000115659 Dmxl2Q8BPN8 3032 aa8.19□□□□□ -1.1
Pcdha9-201ENSMUST00000115659 Tenm4Q3UHK6 2771 aa8.18□□□□□ -1.1
Pcdha9-201ENSMUST00000115659 Pdzd2E9Q1M1 2796 aa8.17□□□□□ -1.1
Pcdha9-201ENSMUST00000115659 Celsr2Q9R0M0 2920 aa8.17□□□□□ -1.1
Pcdha9-201ENSMUST00000115659 DspE9Q557 2883 aaKnown RBP8.16□□□□□ -1.1
Pcdha9-201ENSMUST00000115659 FryE9Q8I9 3020 aa8.14□□□□□ -1.11
Pcdha9-201ENSMUST00000115659 Szt2A2A9C3 3431 aa8.14□□□□□ -1.11
Pcdha9-201ENSMUST00000115659 2310079G19RikQ9D6L6 185 aa8.14□□□□□ -1.11
Pcdha9-201ENSMUST00000115659 Gm9112A2AI92 75 aa8.11□□□□□ -1.11
Pcdha9-201ENSMUST00000115659 Celsr3Q91ZI0 3301 aa8.09□□□□□ -1.11
Pcdha9-201ENSMUST00000115659 B930094E09RikQ8C4T2 136 aa8.08□□□□□ -1.12
Pcdha9-201ENSMUST00000115659 Tenm3Q9WTS6 2715 aa8.08□□□□□ -1.12
Pcdha9-201ENSMUST00000115659 Lama1P19137 3084 aa8.06□□□□□ -1.12
Pcdha9-201ENSMUST00000115659 Chd9Q8BYH8 2885 aa8.05□□□□□ -1.12
Pcdha9-201ENSMUST00000115659 Gm17416Q30KP4 66 aa8.03□□□□□ -1.12
Pcdha9-201ENSMUST00000115659 Trank1Q8BV79 2999 aa8.01□□□□□ -1.13
Pcdha9-201ENSMUST00000115659 2310057N15RikQ9D6T8 200 aa8.01□□□□□ -1.13
Pcdha9-201ENSMUST00000115659 Nf1Q04690 2841 aa7.98□□□□□ -1.13
Pcdha9-201ENSMUST00000115659 Dchs2A0A0A6YW72 3346 aa7.9□□□□□ -1.14
Pcdha9-201ENSMUST00000115659 Gm17402F6Z0L5 76 aa7.86□□□□□ -1.15
Pcdha9-201ENSMUST00000115659 2210017I01RikA0A0A6YVV1 95 aa7.85□□□□□ -1.15
Pcdha9-201ENSMUST00000115659 Brca2P97929 3329 aa7.85□□□□□ -1.15
Pcdha9-201ENSMUST00000115659 Tenm1Q9WTS4 2731 aa7.83□□□□□ -1.16
Pcdha9-201ENSMUST00000115659 LrbaQ9ESE1 2856 aa7.82□□□□□ -1.16
Pcdha9-201ENSMUST00000115659 Helz2E9QAM5 2947 aaKnown RBP7.78□□□□□ -1.16
Pcdha9-201ENSMUST00000115659 Wdfy3Q6VNB8 3508 aa7.71□□□□□ -1.18
Pcdha9-201ENSMUST00000115659 Tenm2Q9WTS5 2764 aa7.65□□□□□ -1.18
Pcdha9-201ENSMUST00000115659 Zfhx3Q61329 3726 aa7.65□□□□□ -1.19
Pcdha9-201ENSMUST00000115659 Col6a3E9PWQ3 3284 aa7.63□□□□□ -1.19
Pcdha9-201ENSMUST00000115659 Gm9736A0A1W2P7N1 277 aa7.57□□□□□ -1.2
Pcdha9-201ENSMUST00000115659 Megf8P60882 2789 aa7.56□□□□□ -1.2
Pcdha9-201ENSMUST00000115659 Gm11939A2A592 99 aa7.56□□□□□ -1.2
Pcdha9-201ENSMUST00000115659 VcanQ62059 3357 aa7.54□□□□□ -1.2
Pcdha9-201ENSMUST00000115659 DmdP11531 3678 aa7.53□□□□□ -1.2
Pcdha9-201ENSMUST00000115659 Dchs1E9PVD3 3291 aa7.5□□□□□ -1.21
Pcdha9-201ENSMUST00000115659 SpegQ62407 3262 aa7.5□□□□□ -1.21
Pcdha9-201ENSMUST00000115659 RelnQ60841 3461 aa7.47□□□□□ -1.21
Pcdha9-201ENSMUST00000115659 Prm2P07978 107 aa7.42□□□□□ -1.22
Pcdha9-201ENSMUST00000115659 Vps13cQ8BX70 3748 aa7.42□□□□□ -1.22
Pcdha9-201ENSMUST00000115659 Myo15aQ9QZZ4 3511 aa7.39□□□□□ -1.23
Pcdha9-201ENSMUST00000115659 Gm19668J3QMD1 248 aa7.39□□□□□ -1.23
Pcdha9-201ENSMUST00000115659 Krtap3-2Q9D638 99 aa7.38□□□□□ -1.23
Pcdha9-201ENSMUST00000115659 Krtap3-3Q9D7P0 99 aa7.38□□□□□ -1.23
Pcdha9-201ENSMUST00000115659 Akap9Q70FJ1 3797 aa7.37□□□□□ -1.23
Pcdha9-201ENSMUST00000115659 Muc5acE9QAQ8 3455 aa7.35□□□□□ -1.23
Pcdha9-201ENSMUST00000115659 OtogO55225 2910 aa7.34□□□□□ -1.23
Pcdha9-201ENSMUST00000115659 Krtap13-1Q8K198 168 aa7.32□□□□□ -1.24
Pcdha9-201ENSMUST00000115659 VwfQ8CIZ8 2813 aa7.32□□□□□ -1.24
Pcdha9-201ENSMUST00000115659 Krtap19-5O08632 62 aa7.31□□□□□ -1.24
Pcdha9-201ENSMUST00000115659 Krtap3-1A2A591 98 aa7.27□□□□□ -1.25
Pcdha9-201ENSMUST00000115659 4933428G20RikQ9D3X4 101 aa7.27□□□□□ -1.25
Pcdha9-201ENSMUST00000115659 Gm9918Q8BUR5 174 aa7.25□□□□□ -1.25
Pcdha9-201ENSMUST00000115659 Gm884A2A9H6 3643 aa7.19□□□□□ -1.26
Pcdha9-201ENSMUST00000115659 Csmd1Q923L3 3564 aa7.14□□□□□ -1.27
Pcdha9-201ENSMUST00000115659 Fbn1Q61554 2873 aaKnown RBP7.13□□□□□ -1.27
Pcdha9-201ENSMUST00000115659 SpenQ62504 3644 aaKnown RBP7.09□□□□□ -1.27
Pcdha9-201ENSMUST00000115659 Gm10318A0A1W2P728 225 aa7.03□□□□□ -1.28
Pcdha9-201ENSMUST00000115659 Zfhx4Q9JJN2 3550 aa7□□□□□ -1.29
Pcdha9-201ENSMUST00000115659 Smg1Q8BKX6 3658 aaKnown RBP6.98□□□□□ -1.29
Pcdha9-201ENSMUST00000115659 Crct1Q6PAI5 102 aa6.94□□□□□ -1.3
Pcdha9-201ENSMUST00000115659 Ank2Q8C8R3 3898 aa6.91□□□□□ -1.3
Pcdha9-201ENSMUST00000115659 Lama5Q61001 3718 aa6.87□□□□□ -1.31
Pcdha9-201ENSMUST00000115659 Col7a1Q63870 2944 aa6.83□□□□□ -1.32
Pcdha9-201ENSMUST00000115659 Krtap1-5A2A590 122 aa6.8□□□□□ -1.32
Pcdha9-201ENSMUST00000115659 Sprr2a3Q4KL71 83 aa6.8□□□□□ -1.32
Pcdha9-201ENSMUST00000115659 Sprr2a1Q9CQK8 83 aa6.8□□□□□ -1.32
Pcdha9-201ENSMUST00000115659 Muc6Q80T03 2850 aa6.76□□□□□ -1.33
Pcdha9-201ENSMUST00000115659 Krtap7-1Q9D3I6 87 aa6.68□□□□□ -1.34
Pcdha9-201ENSMUST00000115659 Svep1A2AVA0 3567 aa6.66□□□□□ -1.34
Pcdha9-201ENSMUST00000115659 Cmya5Q70KF4 3739 aa6.64□□□□□ -1.35
Pcdha9-201ENSMUST00000115659 Krtap19-9aF8WH65 55 aa6.62□□□□□ -1.35
Pcdha9-201ENSMUST00000115659 Dnah14A0A140LIJ4 4489 aa6.62□□□□□ -1.35
Pcdha9-201ENSMUST00000115659 Huwe1Q7TMY8 4377 aaKnown RBP6.55□□□□□ -1.36
Pcdha9-201ENSMUST00000115659 Dnah5Q8VHE6 4621 aa6.55□□□□□ -1.36
Pcdha9-201ENSMUST00000115659 Krtap1-4Q3V2D6 188 aa6.55□□□□□ -1.36
Pcdha9-201ENSMUST00000115659 Gm18596A0A1W2P860 280 aa6.53□□□□□ -1.36
Pcdha9-201ENSMUST00000115659 Stard9Q80TF6 4561 aa6.5□□□□□ -1.37
Pcdha9-201ENSMUST00000115659 Dnah10D3YYQ8 4591 aa6.5□□□□□ -1.37
Pcdha9-201ENSMUST00000115659 Muc4Q8JZM8 3443 aa6.49□□□□□ -1.37
Pcdha9-201ENSMUST00000115659 Krtap19-9bQ99NG9 58 aa6.48□□□□□ -1.37
Pcdha9-201ENSMUST00000115659 Vps13dB1ART2 4390 aa6.47□□□□□ -1.37
Pcdha9-201ENSMUST00000115659 Gm6358A0A087WPH4 74 aa6.45□□□□□ -1.38
Pcdha9-201ENSMUST00000115659 Krtap8-1O08633 61 aa6.39□□□□□ -1.39
Pcdha9-201ENSMUST00000115659 PlecQ9QXS1 4691 aaKnown RBP6.39□□□□□ -1.39
Pcdha9-201ENSMUST00000115659 Dnah17Q69Z23 4481 aa6.36□□□□□ -1.39
Pcdha9-201ENSMUST00000115659 Krtap12-1Q9Z287 130 aa6.32□□□□□ -1.4
Pcdha9-201ENSMUST00000115659 Gm19402J3QJV4 266 aa6.31□□□□□ -1.4
Pcdha9-201ENSMUST00000115659 LystP97412 3788 aa6.27□□□□□ -1.41
Pcdha9-201ENSMUST00000115659 LorP18165 486 aa6.25□□□□□ -1.41
Pcdha9-201ENSMUST00000115659 Csmd2V9GX34 3611 aa6.25□□□□□ -1.41
Pcdha9-201ENSMUST00000115659 Sprr2kO70562 68 aa6.15□□□□□ -1.43
Pcdha9-201ENSMUST00000115659 Lce1mQ9CR91 182 aa6.11□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 154.7 ms