RNA–Protein interactions for RNA: ENSMUST00000106653.3

Usp47-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Usp47, Length 5,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-201ENSMUST00000106653 Dchs2A0A0A6YW72 3346 aa9.34□□□□□ -0.91
Usp47-201ENSMUST00000106653 Gm10382Q3V0T5 144 aa9.34□□□□□ -0.91
Usp47-201ENSMUST00000106653 Cox6b2Q80ZN9 88 aa9.32□□□□□ -0.92
Usp47-201ENSMUST00000106653 TgO08710 2766 aa9.3□□□□□ -0.92
Usp47-201ENSMUST00000106653 FlncQ8VHX6 2726 aaKnown RBP9.3□□□□□ -0.92
Usp47-201ENSMUST00000106653 Col6a3E9PWQ3 3284 aa9.28□□□□□ -0.92
Usp47-201ENSMUST00000106653 Zfhx3Q61329 3726 aa9.27□□□□□ -0.93
Usp47-201ENSMUST00000106653 1700042G07RikB1AUF7 90 aa9.26□□□□□ -0.93
Usp47-201ENSMUST00000106653 DspE9Q557 2883 aaKnown RBP9.26□□□□□ -0.93
Usp47-201ENSMUST00000106653 D6Ertd527eA0A0N4SWI3 464 aa9.24□□□□□ -0.93
Usp47-201ENSMUST00000106653 Srrm2Q8BTI8 2703 aaKnown RBP9.22□□□□□ -0.93
Usp47-201ENSMUST00000106653 VcanQ62059 3357 aa9.2□□□□□ -0.94
Usp47-201ENSMUST00000106653 Tenm3Q9WTS6 2715 aa9.18□□□□□ -0.94
Usp47-201ENSMUST00000106653 ApcQ61315 2845 aa9.17□□□□□ -0.94
Usp47-201ENSMUST00000106653 Wdfy3Q6VNB8 3508 aa9.16□□□□□ -0.94
Usp47-201ENSMUST00000106653 Celsr2Q9R0M0 2920 aa9.15□□□□□ -0.94
Usp47-201ENSMUST00000106653 Trank1Q8BV79 2999 aa9.13□□□□□ -0.95
Usp47-201ENSMUST00000106653 Gm5965D3Z724 196 aa9.12□□□□□ -0.95
Usp47-201ENSMUST00000106653 Dchs1E9PVD3 3291 aa9.07□□□□□ -0.96
Usp47-201ENSMUST00000106653 Chd9Q8BYH8 2885 aa9.05□□□□□ -0.96
Usp47-201ENSMUST00000106653 Vps13cQ8BX70 3748 aa9.05□□□□□ -0.96
Usp47-201ENSMUST00000106653 RelnQ60841 3461 aa9.03□□□□□ -0.96
Usp47-201ENSMUST00000106653 Pdzd2E9Q1M1 2796 aa9.03□□□□□ -0.96
Usp47-201ENSMUST00000106653 Myo15aQ9QZZ4 3511 aa9.02□□□□□ -0.96
Usp47-201ENSMUST00000106653 2310057N15RikQ9D6T8 200 aa8.96□□□□□ -0.97
Usp47-201ENSMUST00000106653 Nf1Q04690 2841 aa8.95□□□□□ -0.98
Usp47-201ENSMUST00000106653 Akap9Q70FJ1 3797 aa8.88□□□□□ -0.99
Usp47-201ENSMUST00000106653 Gm21887J3QQ04 176 aa8.87□□□□□ -0.99
Usp47-201ENSMUST00000106653 LrbaQ9ESE1 2856 aa8.85□□□□□ -0.99
Usp47-201ENSMUST00000106653 DmdP11531 3678 aa8.83□□□□□ -1
Usp47-201ENSMUST00000106653 SpegQ62407 3262 aa8.83□□□□□ -1
Usp47-201ENSMUST00000106653 A930033H14RikG5E8X6 103 aa8.74□□□□□ -1.01
Usp47-201ENSMUST00000106653 Muc5acE9QAQ8 3455 aa8.71□□□□□ -1.01
Usp47-201ENSMUST00000106653 Gm20537G3UYK7 97 aa8.67□□□□□ -1.02
Usp47-201ENSMUST00000106653 2310079G19RikQ9D6L6 185 aa8.65□□□□□ -1.02
Usp47-201ENSMUST00000106653 Helz2E9QAM5 2947 aaKnown RBP8.64□□□□□ -1.03
Usp47-201ENSMUST00000106653 Tenm2Q9WTS5 2764 aa8.62□□□□□ -1.03
Usp47-201ENSMUST00000106653 Gm9736A0A1W2P7N1 277 aa8.61□□□□□ -1.03
Usp47-201ENSMUST00000106653 Tenm1Q9WTS4 2731 aa8.59□□□□□ -1.03
Usp47-201ENSMUST00000106653 Tnp1P10856 55 aa8.55□□□□□ -1.04
Usp47-201ENSMUST00000106653 Gm17416Q30KP4 66 aa8.54□□□□□ -1.04
Usp47-201ENSMUST00000106653 OtogO55225 2910 aa8.53□□□□□ -1.04
Usp47-201ENSMUST00000106653 B930094E09RikQ8C4T2 136 aa8.53□□□□□ -1.04
Usp47-201ENSMUST00000106653 Ndufaf8A2AMZ4 74 aa8.52□□□□□ -1.05
Usp47-201ENSMUST00000106653 Gm40193A0A1B0GT39 78 aa8.51□□□□□ -1.05
Usp47-201ENSMUST00000106653 Lama5Q61001 3718 aa8.49□□□□□ -1.05
Usp47-201ENSMUST00000106653 Csmd1Q923L3 3564 aa8.49□□□□□ -1.05
Usp47-201ENSMUST00000106653 Smg1Q8BKX6 3658 aaKnown RBP8.45□□□□□ -1.06
Usp47-201ENSMUST00000106653 Zfhx4Q9JJN2 3550 aa8.43□□□□□ -1.06
Usp47-201ENSMUST00000106653 2210017I01RikA0A0A6YVV1 95 aa8.37□□□□□ -1.07
Usp47-201ENSMUST00000106653 Gm9918Q8BUR5 174 aa8.37□□□□□ -1.07
Usp47-201ENSMUST00000106653 Fbn1Q61554 2873 aaKnown RBP8.36□□□□□ -1.07
Usp47-201ENSMUST00000106653 Ank2Q8C8R3 3898 aa8.28□□□□□ -1.08
Usp47-201ENSMUST00000106653 Gm884A2A9H6 3643 aa8.28□□□□□ -1.08
Usp47-201ENSMUST00000106653 SpenQ62504 3644 aaKnown RBP8.26□□□□□ -1.09
Usp47-201ENSMUST00000106653 VwfQ8CIZ8 2813 aa8.24□□□□□ -1.09
Usp47-201ENSMUST00000106653 Gm11939A2A592 99 aa8.24□□□□□ -1.09
Usp47-201ENSMUST00000106653 Krtap19-5O08632 62 aa8.24□□□□□ -1.09
Usp47-201ENSMUST00000106653 Gm17402F6Z0L5 76 aa8.17□□□□□ -1.1
Usp47-201ENSMUST00000106653 Gm9112A2AI92 75 aa8.1□□□□□ -1.11
Usp47-201ENSMUST00000106653 Gm10318A0A1W2P728 225 aa8.08□□□□□ -1.12
Usp47-201ENSMUST00000106653 Megf8P60882 2789 aa8.04□□□□□ -1.12
Usp47-201ENSMUST00000106653 Svep1A2AVA0 3567 aa8□□□□□ -1.13
Usp47-201ENSMUST00000106653 Krtap13-1Q8K198 168 aa8□□□□□ -1.13
Usp47-201ENSMUST00000106653 Prm2P07978 107 aa7.99□□□□□ -1.13
Usp47-201ENSMUST00000106653 Cmya5Q70KF4 3739 aa7.98□□□□□ -1.13
Usp47-201ENSMUST00000106653 Crct1Q6PAI5 102 aa7.95□□□□□ -1.14
Usp47-201ENSMUST00000106653 Krtap3-2Q9D638 99 aa7.95□□□□□ -1.14
Usp47-201ENSMUST00000106653 Krtap3-3Q9D7P0 99 aa7.95□□□□□ -1.14
Usp47-201ENSMUST00000106653 Col7a1Q63870 2944 aa7.89□□□□□ -1.15
Usp47-201ENSMUST00000106653 Gm19668J3QMD1 248 aa7.89□□□□□ -1.15
Usp47-201ENSMUST00000106653 Krtap3-1A2A591 98 aa7.84□□□□□ -1.15
Usp47-201ENSMUST00000106653 Dnah14A0A140LIJ4 4489 aa7.83□□□□□ -1.16
Usp47-201ENSMUST00000106653 Huwe1Q7TMY8 4377 aaKnown RBP7.78□□□□□ -1.16
Usp47-201ENSMUST00000106653 Muc6Q80T03 2850 aa7.76□□□□□ -1.17
Usp47-201ENSMUST00000106653 Csmd2V9GX34 3611 aa7.74□□□□□ -1.17
Usp47-201ENSMUST00000106653 Muc4Q8JZM8 3443 aa7.67□□□□□ -1.18
Usp47-201ENSMUST00000106653 LystP97412 3788 aa7.59□□□□□ -1.19
Usp47-201ENSMUST00000106653 Dnah10D3YYQ8 4591 aa7.53□□□□□ -1.2
Usp47-201ENSMUST00000106653 Dnah5Q8VHE6 4621 aa7.5□□□□□ -1.21
Usp47-201ENSMUST00000106653 Dnah17Q69Z23 4481 aa7.43□□□□□ -1.22
Usp47-201ENSMUST00000106653 Vps13dB1ART2 4390 aa7.42□□□□□ -1.22
Usp47-201ENSMUST00000106653 4933428G20RikQ9D3X4 101 aa7.41□□□□□ -1.22
Usp47-201ENSMUST00000106653 Krtap1-5A2A590 122 aa7.41□□□□□ -1.22
Usp47-201ENSMUST00000106653 Stard9Q80TF6 4561 aa7.38□□□□□ -1.23
Usp47-201ENSMUST00000106653 PlecQ9QXS1 4691 aaKnown RBP7.36□□□□□ -1.23
Usp47-201ENSMUST00000106653 BsnO88737 3942 aa7.26□□□□□ -1.25
Usp47-201ENSMUST00000106653 Sprr2a3Q4KL71 83 aa7.25□□□□□ -1.25
Usp47-201ENSMUST00000106653 Sprr2a1Q9CQK8 83 aa7.25□□□□□ -1.25
Usp47-201ENSMUST00000106653 Gm18596A0A1W2P860 280 aa7.25□□□□□ -1.25
Usp47-201ENSMUST00000106653 Krtap19-9aF8WH65 55 aa7.22□□□□□ -1.25
Usp47-201ENSMUST00000106653 Krtap1-4Q3V2D6 188 aa7.17□□□□□ -1.26
Usp47-201ENSMUST00000106653 CubnQ9JLB4 3623 aa7.17□□□□□ -1.26
Usp47-201ENSMUST00000106653 LorP18165 486 aa7.17□□□□□ -1.26
Usp47-201ENSMUST00000106653 Dnah11E9Q7N9 4488 aa7.15□□□□□ -1.26
Usp47-201ENSMUST00000106653 Dync2h1Q45VK7 4306 aa7.15□□□□□ -1.26
Usp47-201ENSMUST00000106653 Xirp2Q4U4S6 3784 aa7.14□□□□□ -1.27
Usp47-201ENSMUST00000106653 TnxbO35452 4006 aa7.1□□□□□ -1.27
Usp47-201ENSMUST00000106653 Hspg2Q05793 3707 aaKnown RBP7.09□□□□□ -1.27
Usp47-201ENSMUST00000106653 Gm6358A0A087WPH4 74 aa7.06□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 90 ms