RNA–Protein interactions for RNA: ENSMUST00000084838.12

Cd47-201, Transcript of Leukocyte surface antigen CD47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cd47, Length 5,277 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47-201ENSMUST00000084838 Dchs2A0A0A6YW72 3346 aa10.25□□□□□ -0.77
Cd47-201ENSMUST00000084838 Nf1Q04690 2841 aa10.24□□□□□ -0.77
Cd47-201ENSMUST00000084838 Pdzd2E9Q1M1 2796 aa10.21□□□□□ -0.77
Cd47-201ENSMUST00000084838 Tenm3Q9WTS6 2715 aa10.19□□□□□ -0.78
Cd47-201ENSMUST00000084838 Chd9Q8BYH8 2885 aa10.19□□□□□ -0.78
Cd47-201ENSMUST00000084838 Gm3646F6S692 53 aa10.19□□□□□ -0.78
Cd47-201ENSMUST00000084838 Celsr3Q91ZI0 3301 aa10.18□□□□□ -0.78
Cd47-201ENSMUST00000084838 ApcQ61315 2845 aa10.17□□□□□ -0.78
Cd47-201ENSMUST00000084838 Romo1P60603 79 aa10.13□□□□□ -0.79
Cd47-201ENSMUST00000084838 Cox6b2Q80ZN9 88 aa10.09□□□□□ -0.79
Cd47-201ENSMUST00000084838 Brca2P97929 3329 aa10.07□□□□□ -0.8
Cd47-201ENSMUST00000084838 Gm10382Q3V0T5 144 aa10.03□□□□□ -0.8
Cd47-201ENSMUST00000084838 Col6a3E9PWQ3 3284 aa9.98□□□□□ -0.81
Cd47-201ENSMUST00000084838 D6Ertd527eA0A0N4SWI3 464 aa9.97□□□□□ -0.81
Cd47-201ENSMUST00000084838 Gm5965D3Z724 196 aa9.96□□□□□ -0.82
Cd47-201ENSMUST00000084838 4933415A04RikQ9D443 101 aa9.91□□□□□ -0.82
Cd47-201ENSMUST00000084838 Tenm1Q9WTS4 2731 aa9.88□□□□□ -0.83
Cd47-201ENSMUST00000084838 VcanQ62059 3357 aa9.88□□□□□ -0.83
Cd47-201ENSMUST00000084838 LrbaQ9ESE1 2856 aa9.86□□□□□ -0.83
Cd47-201ENSMUST00000084838 2310057N15RikQ9D6T8 200 aa9.79□□□□□ -0.84
Cd47-201ENSMUST00000084838 Tenm2Q9WTS5 2764 aa9.74□□□□□ -0.85
Cd47-201ENSMUST00000084838 A930033H14RikG5E8X6 103 aa9.7□□□□□ -0.86
Cd47-201ENSMUST00000084838 1700042G07RikB1AUF7 90 aa9.7□□□□□ -0.86
Cd47-201ENSMUST00000084838 Dchs1E9PVD3 3291 aa9.69□□□□□ -0.86
Cd47-201ENSMUST00000084838 SmcpP15265 143 aa9.67□□□□□ -0.86
Cd47-201ENSMUST00000084838 Helz2E9QAM5 2947 aaKnown RBP9.65□□□□□ -0.86
Cd47-201ENSMUST00000084838 Gm21887J3QQ04 176 aa9.62□□□□□ -0.87
Cd47-201ENSMUST00000084838 SpegQ62407 3262 aa9.61□□□□□ -0.87
Cd47-201ENSMUST00000084838 RelnQ60841 3461 aa9.55□□□□□ -0.88
Cd47-201ENSMUST00000084838 Myo15aQ9QZZ4 3511 aa9.47□□□□□ -0.89
Cd47-201ENSMUST00000084838 Muc5acE9QAQ8 3455 aa9.44□□□□□ -0.9
Cd47-201ENSMUST00000084838 OtogO55225 2910 aa9.43□□□□□ -0.9
Cd47-201ENSMUST00000084838 Zfhx3Q61329 3726 aa9.41□□□□□ -0.9
Cd47-201ENSMUST00000084838 Megf8P60882 2789 aa9.4□□□□□ -0.9
Cd47-201ENSMUST00000084838 Gm17416Q30KP4 66 aa9.35□□□□□ -0.91
Cd47-201ENSMUST00000084838 Wdfy3Q6VNB8 3508 aa9.33□□□□□ -0.92
Cd47-201ENSMUST00000084838 Gm9736A0A1W2P7N1 277 aa9.32□□□□□ -0.92
Cd47-201ENSMUST00000084838 Tnp1P10856 55 aa9.3□□□□□ -0.92
Cd47-201ENSMUST00000084838 Akap9Q70FJ1 3797 aa9.29□□□□□ -0.92
Cd47-201ENSMUST00000084838 VwfQ8CIZ8 2813 aa9.27□□□□□ -0.93
Cd47-201ENSMUST00000084838 2310079G19RikQ9D6L6 185 aa9.22□□□□□ -0.93
Cd47-201ENSMUST00000084838 Vps13cQ8BX70 3748 aa9.21□□□□□ -0.94
Cd47-201ENSMUST00000084838 Gm20537G3UYK7 97 aa9.19□□□□□ -0.94
Cd47-201ENSMUST00000084838 Gm40193A0A1B0GT39 78 aa9.18□□□□□ -0.94
Cd47-201ENSMUST00000084838 B930094E09RikQ8C4T2 136 aa9.17□□□□□ -0.94
Cd47-201ENSMUST00000084838 Fbn1Q61554 2873 aaKnown RBP9.16□□□□□ -0.94
Cd47-201ENSMUST00000084838 2210017I01RikA0A0A6YVV1 95 aa9.14□□□□□ -0.95
Cd47-201ENSMUST00000084838 DmdP11531 3678 aa9.08□□□□□ -0.96
Cd47-201ENSMUST00000084838 Col7a1Q63870 2944 aa9.03□□□□□ -0.96
Cd47-201ENSMUST00000084838 Gm9918Q8BUR5 174 aa9.03□□□□□ -0.96
Cd47-201ENSMUST00000084838 Krtap19-5O08632 62 aa9.01□□□□□ -0.97
Cd47-201ENSMUST00000084838 Ndufaf8A2AMZ4 74 aa8.97□□□□□ -0.97
Cd47-201ENSMUST00000084838 Gm11939A2A592 99 aa8.9□□□□□ -0.98
Cd47-201ENSMUST00000084838 Gm17402F6Z0L5 76 aa8.89□□□□□ -0.99
Cd47-201ENSMUST00000084838 Lama5Q61001 3718 aa8.83□□□□□ -1
Cd47-201ENSMUST00000084838 Muc6Q80T03 2850 aa8.81□□□□□ -1
Cd47-201ENSMUST00000084838 Zfhx4Q9JJN2 3550 aa8.79□□□□□ -1
Cd47-201ENSMUST00000084838 Smg1Q8BKX6 3658 aaKnown RBP8.73□□□□□ -1.01
Cd47-201ENSMUST00000084838 Prm2P07978 107 aa8.71□□□□□ -1.01
Cd47-201ENSMUST00000084838 Gm10318A0A1W2P728 225 aa8.71□□□□□ -1.02
Cd47-201ENSMUST00000084838 Krtap13-1Q8K198 168 aa8.67□□□□□ -1.02
Cd47-201ENSMUST00000084838 Crct1Q6PAI5 102 aa8.65□□□□□ -1.02
Cd47-201ENSMUST00000084838 Csmd1Q923L3 3564 aa8.64□□□□□ -1.03
Cd47-201ENSMUST00000084838 Ank2Q8C8R3 3898 aa8.64□□□□□ -1.03
Cd47-201ENSMUST00000084838 Gm9112A2AI92 75 aa8.57□□□□□ -1.04
Cd47-201ENSMUST00000084838 Gm19668J3QMD1 248 aa8.56□□□□□ -1.04
Cd47-201ENSMUST00000084838 Muc4Q8JZM8 3443 aa8.54□□□□□ -1.04
Cd47-201ENSMUST00000084838 Krtap3-2Q9D638 99 aa8.48□□□□□ -1.05
Cd47-201ENSMUST00000084838 Krtap3-3Q9D7P0 99 aa8.48□□□□□ -1.05
Cd47-201ENSMUST00000084838 SpenQ62504 3644 aaKnown RBP8.46□□□□□ -1.06
Cd47-201ENSMUST00000084838 Krtap3-1A2A591 98 aa8.4□□□□□ -1.06
Cd47-201ENSMUST00000084838 Dnah14A0A140LIJ4 4489 aa8.22□□□□□ -1.09
Cd47-201ENSMUST00000084838 Gm884A2A9H6 3643 aa8.22□□□□□ -1.09
Cd47-201ENSMUST00000084838 Svep1A2AVA0 3567 aa8.21□□□□□ -1.1
Cd47-201ENSMUST00000084838 Cmya5Q70KF4 3739 aa8.11□□□□□ -1.11
Cd47-201ENSMUST00000084838 Huwe1Q7TMY8 4377 aaKnown RBP8.11□□□□□ -1.11
Cd47-201ENSMUST00000084838 4933428G20RikQ9D3X4 101 aa8.1□□□□□ -1.11
Cd47-201ENSMUST00000084838 Gm18596A0A1W2P860 280 aa8.09□□□□□ -1.11
Cd47-201ENSMUST00000084838 Csmd2V9GX34 3611 aa8.07□□□□□ -1.12
Cd47-201ENSMUST00000084838 Dnah5Q8VHE6 4621 aa8.02□□□□□ -1.12
Cd47-201ENSMUST00000084838 Krtap1-5A2A590 122 aa8.01□□□□□ -1.13
Cd47-201ENSMUST00000084838 Stard9Q80TF6 4561 aa8□□□□□ -1.13
Cd47-201ENSMUST00000084838 Dnah10D3YYQ8 4591 aa7.95□□□□□ -1.14
Cd47-201ENSMUST00000084838 Vps13dB1ART2 4390 aa7.93□□□□□ -1.14
Cd47-201ENSMUST00000084838 PlecQ9QXS1 4691 aaKnown RBP7.91□□□□□ -1.14
Cd47-201ENSMUST00000084838 Krtap19-9aF8WH65 55 aa7.88□□□□□ -1.15
Cd47-201ENSMUST00000084838 LorP18165 486 aa7.88□□□□□ -1.15
Cd47-201ENSMUST00000084838 LystP97412 3788 aa7.81□□□□□ -1.16
Cd47-201ENSMUST00000084838 Sprr2a3Q4KL71 83 aa7.8□□□□□ -1.16
Cd47-201ENSMUST00000084838 Sprr2a1Q9CQK8 83 aa7.8□□□□□ -1.16
Cd47-201ENSMUST00000084838 Krtap8-1O08633 61 aa7.79□□□□□ -1.16
Cd47-201ENSMUST00000084838 Krtap1-4Q3V2D6 188 aa7.79□□□□□ -1.16
Cd47-201ENSMUST00000084838 Gm6358A0A087WPH4 74 aa7.75□□□□□ -1.17
Cd47-201ENSMUST00000084838 Dnah17Q69Z23 4481 aa7.69□□□□□ -1.18
Cd47-201ENSMUST00000084838 Gm19402J3QJV4 266 aa7.68□□□□□ -1.18
Cd47-201ENSMUST00000084838 Sprr2kO70562 68 aa7.6□□□□□ -1.19
Cd47-201ENSMUST00000084838 Ryr1E9PZQ0 5035 aa7.6□□□□□ -1.19
Cd47-201ENSMUST00000084838 Krtap12-1Q9Z287 130 aa7.6□□□□□ -1.19
Cd47-201ENSMUST00000084838 Lce1mQ9CR91 182 aa7.58□□□□□ -1.2
Cd47-201ENSMUST00000084838 Krtap7-1Q9D3I6 87 aa7.56□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 58.4 ms