RNA–Protein interactions for RNA: ENSMUST00000081339.12

Rrp1b-201, Transcript of Ribosomal RNA processing protein 1 homolog B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rrp1b, Length 4,874 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1b-201ENSMUST00000081339 Gm16253D3Z167 63 aa8.63□□□□□ -1.03
Rrp1b-201ENSMUST00000081339 Rnase13Q5GAM7 153 aa8.62□□□□□ -1.03
Rrp1b-201ENSMUST00000081339 TgO08710 2766 aa8.62□□□□□ -1.03
Rrp1b-201ENSMUST00000081339 2310061N02RikQ9D6S9 174 aa8.61□□□□□ -1.03
Rrp1b-201ENSMUST00000081339 SpenQ62504 3644 aaKnown RBP8.59□□□□□ -1.03
Rrp1b-201ENSMUST00000081339 Gm3646F6S692 53 aa8.59□□□□□ -1.03
Rrp1b-201ENSMUST00000081339 4933415A04RikQ9D443 101 aa8.53□□□□□ -1.04
Rrp1b-201ENSMUST00000081339 Tenm1Q9WTS4 2731 aa8.52□□□□□ -1.05
Rrp1b-201ENSMUST00000081339 Krtap10-10A0A1W2P7T6 217 aa8.52□□□□□ -1.05
Rrp1b-201ENSMUST00000081339 Gm4491E0CX42 125 aa8.51□□□□□ -1.05
Rrp1b-201ENSMUST00000081339 Gm3880A0A1B0GSB3 72 aa8.5□□□□□ -1.05
Rrp1b-201ENSMUST00000081339 Csmd1Q923L3 3564 aa8.49□□□□□ -1.05
Rrp1b-201ENSMUST00000081339 Krtap29-1A2A5X4 342 aa8.48□□□□□ -1.05
Rrp1b-201ENSMUST00000081339 Gm9955Q8CEJ8 102 aa8.46□□□□□ -1.06
Rrp1b-201ENSMUST00000081339 1700042G07RikB1AUF7 90 aa8.42□□□□□ -1.06
Rrp1b-201ENSMUST00000081339 Gm2310J3QNJ2 377 aa8.42□□□□□ -1.06
Rrp1b-201ENSMUST00000081339 Fbn1Q61554 2873 aaKnown RBP8.4□□□□□ -1.06
Rrp1b-201ENSMUST00000081339 Gm9821Q8K076 103 aa8.4□□□□□ -1.07
Rrp1b-201ENSMUST00000081339 Gm884A2A9H6 3643 aa8.39□□□□□ -1.07
Rrp1b-201ENSMUST00000081339 Gm2696A0A1W2P709 240 aa8.37□□□□□ -1.07
Rrp1b-201ENSMUST00000081339 CriptO70333 101 aa8.36□□□□□ -1.07
Rrp1b-201ENSMUST00000081339 Tenm2Q9WTS5 2764 aa8.35□□□□□ -1.07
Rrp1b-201ENSMUST00000081339 Col7a1Q63870 2944 aa8.34□□□□□ -1.07
Rrp1b-201ENSMUST00000081339 Krtap14O08640 167 aa8.34□□□□□ -1.08
Rrp1b-201ENSMUST00000081339 Krtap15-1Q9QZU5 150 aa8.29□□□□□ -1.08
Rrp1b-201ENSMUST00000081339 Svep1A2AVA0 3567 aa8.29□□□□□ -1.08
Rrp1b-201ENSMUST00000081339 VwfQ8CIZ8 2813 aa8.23□□□□□ -1.09
Rrp1b-201ENSMUST00000081339 Muc4Q8JZM8 3443 aa8.22□□□□□ -1.09
Rrp1b-201ENSMUST00000081339 Tnp2P11378 117 aa8.15□□□□□ -1.1
Rrp1b-201ENSMUST00000081339 Rpl37Q9D823 97 aa8.14□□□□□ -1.11
Rrp1b-201ENSMUST00000081339 Gm5767A0A0J9YTU8 78 aa8.11□□□□□ -1.11
Rrp1b-201ENSMUST00000081339 Megf8P60882 2789 aa8.11□□□□□ -1.11
Rrp1b-201ENSMUST00000081339 Romo1P60603 79 aa8.07□□□□□ -1.12
Rrp1b-201ENSMUST00000081339 Pla2g10Q9QXX3 151 aa8.07□□□□□ -1.12
Rrp1b-201ENSMUST00000081339 Spink7Q6IE32 76 aa8.07□□□□□ -1.12
Rrp1b-201ENSMUST00000081339 Muc6Q80T03 2850 aa8.07□□□□□ -1.12
Rrp1b-201ENSMUST00000081339 Cmya5Q70KF4 3739 aa8.05□□□□□ -1.12
Rrp1b-201ENSMUST00000081339 Sec61bQ9CQS8 96 aaKnown RBP8.01□□□□□ -1.13
Rrp1b-201ENSMUST00000081339 Cox6b2Q80ZN9 88 aa8□□□□□ -1.13
Rrp1b-201ENSMUST00000081339 Rps29P62274 56 aa7.99□□□□□ -1.13
Rrp1b-201ENSMUST00000081339 Gm10382Q3V0T5 144 aa7.99□□□□□ -1.13
Rrp1b-201ENSMUST00000081339 Csmd2V9GX34 3611 aa7.98□□□□□ -1.13
Rrp1b-201ENSMUST00000081339 Gm20538F6Z9R1 75 aa7.97□□□□□ -1.13
Rrp1b-201ENSMUST00000081339 D6Ertd527eA0A0N4SWI3 464 aa7.96□□□□□ -1.14
Rrp1b-201ENSMUST00000081339 Fam229aB2KGE5 128 aa7.96□□□□□ -1.14
Rrp1b-201ENSMUST00000081339 Ank2Q8C8R3 3898 aa7.91□□□□□ -1.14
Rrp1b-201ENSMUST00000081339 BC029722A0A0N4SW31 51 aa7.91□□□□□ -1.14
Rrp1b-201ENSMUST00000081339 Camk2n1Q6QWF9 78 aa7.82□□□□□ -1.16
Rrp1b-201ENSMUST00000081339 Gm5965D3Z724 196 aa7.79□□□□□ -1.16
Rrp1b-201ENSMUST00000081339 Gm19426M0QWC7 77 aa7.79□□□□□ -1.16
Rrp1b-201ENSMUST00000081339 Gm9918Q8BUR5 174 aa7.69□□□□□ -1.18
Rrp1b-201ENSMUST00000081339 2310057N15RikQ9D6T8 200 aa7.61□□□□□ -1.19
Rrp1b-201ENSMUST00000081339 Gm20537G3UYK7 97 aa7.6□□□□□ -1.19
Rrp1b-201ENSMUST00000081339 A930033H14RikG5E8X6 103 aa7.6□□□□□ -1.19
Rrp1b-201ENSMUST00000081339 2310079G19RikQ9D6L6 185 aa7.6□□□□□ -1.19
Rrp1b-201ENSMUST00000081339 CubnQ9JLB4 3623 aa7.55□□□□□ -1.2
Rrp1b-201ENSMUST00000081339 Gm9736A0A1W2P7N1 277 aa7.54□□□□□ -1.2
Rrp1b-201ENSMUST00000081339 LystP97412 3788 aa7.5□□□□□ -1.21
Rrp1b-201ENSMUST00000081339 Ndufaf8A2AMZ4 74 aa7.49□□□□□ -1.21
Rrp1b-201ENSMUST00000081339 Dnah14A0A140LIJ4 4489 aa7.41□□□□□ -1.22
Rrp1b-201ENSMUST00000081339 Gm21887J3QQ04 176 aa7.34□□□□□ -1.23
Rrp1b-201ENSMUST00000081339 Gm40193A0A1B0GT39 78 aa7.34□□□□□ -1.24
Rrp1b-201ENSMUST00000081339 Krtap19-5O08632 62 aa7.33□□□□□ -1.24
Rrp1b-201ENSMUST00000081339 B930094E09RikQ8C4T2 136 aa7.27□□□□□ -1.25
Rrp1b-201ENSMUST00000081339 Gm17416Q30KP4 66 aa7.26□□□□□ -1.25
Rrp1b-201ENSMUST00000081339 BsnO88737 3942 aa7.26□□□□□ -1.25
Rrp1b-201ENSMUST00000081339 Xirp2Q4U4S6 3784 aa7.25□□□□□ -1.25
Rrp1b-201ENSMUST00000081339 Huwe1Q7TMY8 4377 aaKnown RBP7.17□□□□□ -1.26
Rrp1b-201ENSMUST00000081339 Gm9112A2AI92 75 aa7.16□□□□□ -1.26
Rrp1b-201ENSMUST00000081339 Hspg2Q05793 3707 aaKnown RBP7.14□□□□□ -1.27
Rrp1b-201ENSMUST00000081339 2210017I01RikA0A0A6YVV1 95 aa7.13□□□□□ -1.27
Rrp1b-201ENSMUST00000081339 Gm11939A2A592 99 aa7.13□□□□□ -1.27
Rrp1b-201ENSMUST00000081339 Tnp1P10856 55 aa7.13□□□□□ -1.27
Rrp1b-201ENSMUST00000081339 Krtap3-2Q9D638 99 aa7.06□□□□□ -1.28
Rrp1b-201ENSMUST00000081339 Krtap3-3Q9D7P0 99 aa7.06□□□□□ -1.28
Rrp1b-201ENSMUST00000081339 Dnah10D3YYQ8 4591 aa7.04□□□□□ -1.28
Rrp1b-201ENSMUST00000081339 Gm10318A0A1W2P728 225 aa7.03□□□□□ -1.28
Rrp1b-201ENSMUST00000081339 Gm17402F6Z0L5 76 aa7□□□□□ -1.29
Rrp1b-201ENSMUST00000081339 Crct1Q6PAI5 102 aa6.98□□□□□ -1.29
Rrp1b-201ENSMUST00000081339 TnxbO35452 4006 aa6.96□□□□□ -1.3
Rrp1b-201ENSMUST00000081339 Dnah5Q8VHE6 4621 aa6.95□□□□□ -1.3
Rrp1b-201ENSMUST00000081339 Csmd3Q80T79 3707 aa6.93□□□□□ -1.3
Rrp1b-201ENSMUST00000081339 PlecQ9QXS1 4691 aaKnown RBP6.92□□□□□ -1.3
Rrp1b-201ENSMUST00000081339 Ryr1E9PZQ0 5035 aa6.9□□□□□ -1.31
Rrp1b-201ENSMUST00000081339 Vps13dB1ART2 4390 aa6.87□□□□□ -1.31
Rrp1b-201ENSMUST00000081339 Stard9Q80TF6 4561 aa6.84□□□□□ -1.31
Rrp1b-201ENSMUST00000081339 Dnah17Q69Z23 4481 aa6.84□□□□□ -1.31
Rrp1b-201ENSMUST00000081339 Prm2P07978 107 aa6.78□□□□□ -1.32
Rrp1b-201ENSMUST00000081339 Krtap3-1A2A591 98 aa6.77□□□□□ -1.33
Rrp1b-201ENSMUST00000081339 Krtap13-1Q8K198 168 aa6.77□□□□□ -1.33
Rrp1b-201ENSMUST00000081339 Dnah7bL7N1Y0 4068 aa6.71□□□□□ -1.34
Rrp1b-201ENSMUST00000081339 PrkdcP97313 4128 aa6.7□□□□□ -1.34
Rrp1b-201ENSMUST00000081339 Dnah11E9Q7N9 4488 aa6.68□□□□□ -1.34
Rrp1b-201ENSMUST00000081339 Dnah9B1AR51 4484 aa6.67□□□□□ -1.34
Rrp1b-201ENSMUST00000081339 Gm18596A0A1W2P860 280 aa6.67□□□□□ -1.34
Rrp1b-201ENSMUST00000081339 Dync2h1Q45VK7 4306 aa6.63□□□□□ -1.35
Rrp1b-201ENSMUST00000081339 Ryr3A2AGL3 4863 aa6.61□□□□□ -1.35
Rrp1b-201ENSMUST00000081339 Dync1h1Q9JHU4 4644 aaKnown RBP6.58□□□□□ -1.36
Rrp1b-201ENSMUST00000081339 Gm19668J3QMD1 248 aa6.58□□□□□ -1.36
Rrp1b-201ENSMUST00000081339 Kmt2aP55200 3966 aa6.55□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 46.9 ms