RNA–Protein interactions for RNA: ENSMUST00000071370.6

Pcdh17-201, Transcript of Protocadherin 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh17, Length 11,451 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17-201ENSMUST00000071370 Dmxl2Q8BPN8 3032 aa4.28□□□□□ -1.72
Pcdh17-201ENSMUST00000071370 Tnp2P11378 117 aa4.28□□□□□ -1.72
Pcdh17-201ENSMUST00000071370 Gm21887J3QQ04 176 aa4.28□□□□□ -1.72
Pcdh17-201ENSMUST00000071370 Lama1P19137 3084 aa4.27□□□□□ -1.73
Pcdh17-201ENSMUST00000071370 Frem2Q6NVD0 3160 aa4.27□□□□□ -1.73
Pcdh17-201ENSMUST00000071370 Gm9112A2AI92 75 aa4.25□□□□□ -1.73
Pcdh17-201ENSMUST00000071370 Tnp1P10856 55 aa4.24□□□□□ -1.73
Pcdh17-201ENSMUST00000071370 LrbaQ9ESE1 2856 aa4.24□□□□□ -1.73
Pcdh17-201ENSMUST00000071370 AspmQ8CJ27 3122 aa4.23□□□□□ -1.73
Pcdh17-201ENSMUST00000071370 Krtap10-4Q08EG8 221 aa4.23□□□□□ -1.73
Pcdh17-201ENSMUST00000071370 Adgrg4B7ZCC9 3073 aa4.22□□□□□ -1.73
Pcdh17-201ENSMUST00000071370 Unc80Q8BLN6 3261 aa4.21□□□□□ -1.74
Pcdh17-201ENSMUST00000071370 A930033H14RikG5E8X6 103 aa4.19□□□□□ -1.74
Pcdh17-201ENSMUST00000071370 Krtap10-10A0A1W2P7T6 217 aa4.18□□□□□ -1.74
Pcdh17-201ENSMUST00000071370 Cdh23Q99PF4 3354 aa4.18□□□□□ -1.74
Pcdh17-201ENSMUST00000071370 Tenm4Q3UHK6 2771 aa4.17□□□□□ -1.74
Pcdh17-201ENSMUST00000071370 Tenm3Q9WTS6 2715 aa4.17□□□□□ -1.74
Pcdh17-201ENSMUST00000071370 2310061N02RikQ9D6S9 174 aa4.16□□□□□ -1.74
Pcdh17-201ENSMUST00000071370 Megf8P60882 2789 aa4.16□□□□□ -1.74
Pcdh17-201ENSMUST00000071370 Gm20537G3UYK7 97 aa4.15□□□□□ -1.74
Pcdh17-201ENSMUST00000071370 Zfhx3Q61329 3726 aa4.15□□□□□ -1.75
Pcdh17-201ENSMUST00000071370 Helz2E9QAM5 2947 aaKnown RBP4.14□□□□□ -1.75
Pcdh17-201ENSMUST00000071370 2310079G19RikQ9D6L6 185 aa4.13□□□□□ -1.75
Pcdh17-201ENSMUST00000071370 2310057N15RikQ9D6T8 200 aa4.12□□□□□ -1.75
Pcdh17-201ENSMUST00000071370 Celsr3Q91ZI0 3301 aa4.11□□□□□ -1.75
Pcdh17-201ENSMUST00000071370 Gm17402F6Z0L5 76 aa4.09□□□□□ -1.75
Pcdh17-201ENSMUST00000071370 Gm2696A0A1W2P709 240 aa4.09□□□□□ -1.76
Pcdh17-201ENSMUST00000071370 Gm5965D3Z724 196 aa4.06□□□□□ -1.76
Pcdh17-201ENSMUST00000071370 Lrrc37aB1AWG4 3215 aa4.05□□□□□ -1.76
Pcdh17-201ENSMUST00000071370 VwfQ8CIZ8 2813 aa4.05□□□□□ -1.76
Pcdh17-201ENSMUST00000071370 Gm17416Q30KP4 66 aa4.01□□□□□ -1.77
Pcdh17-201ENSMUST00000071370 Szt2A2A9C3 3431 aa4.01□□□□□ -1.77
Pcdh17-201ENSMUST00000071370 Vps13cQ8BX70 3748 aa4.01□□□□□ -1.77
Pcdh17-201ENSMUST00000071370 B930094E09RikQ8C4T2 136 aa4.01□□□□□ -1.77
Pcdh17-201ENSMUST00000071370 OtogO55225 2910 aa4□□□□□ -1.77
Pcdh17-201ENSMUST00000071370 Akap9Q70FJ1 3797 aa3.97□□□□□ -1.77
Pcdh17-201ENSMUST00000071370 Ank2Q8C8R3 3898 aa3.95□□□□□ -1.78
Pcdh17-201ENSMUST00000071370 Prm2P07978 107 aa3.94□□□□□ -1.78
Pcdh17-201ENSMUST00000071370 Brca2P97929 3329 aa3.93□□□□□ -1.78
Pcdh17-201ENSMUST00000071370 Myo15aQ9QZZ4 3511 aa3.92□□□□□ -1.78
Pcdh17-201ENSMUST00000071370 Tenm2Q9WTS5 2764 aa3.92□□□□□ -1.78
Pcdh17-201ENSMUST00000071370 Fbn1Q61554 2873 aaKnown RBP3.9□□□□□ -1.78
Pcdh17-201ENSMUST00000071370 Dchs2A0A0A6YW72 3346 aa3.89□□□□□ -1.79
Pcdh17-201ENSMUST00000071370 2210017I01RikA0A0A6YVV1 95 aa3.86□□□□□ -1.79
Pcdh17-201ENSMUST00000071370 VcanQ62059 3357 aa3.86□□□□□ -1.79
Pcdh17-201ENSMUST00000071370 DmdP11531 3678 aa3.86□□□□□ -1.79
Pcdh17-201ENSMUST00000071370 Gm9918Q8BUR5 174 aa3.85□□□□□ -1.79
Pcdh17-201ENSMUST00000071370 SpegQ62407 3262 aa3.83□□□□□ -1.8
Pcdh17-201ENSMUST00000071370 4933428G20RikQ9D3X4 101 aa3.82□□□□□ -1.8
Pcdh17-201ENSMUST00000071370 Col6a3E9PWQ3 3284 aa3.82□□□□□ -1.8
Pcdh17-201ENSMUST00000071370 Col7a1Q63870 2944 aa3.78□□□□□ -1.8
Pcdh17-201ENSMUST00000071370 SpenQ62504 3644 aaKnown RBP3.73□□□□□ -1.81
Pcdh17-201ENSMUST00000071370 Muc6Q80T03 2850 aa3.72□□□□□ -1.81
Pcdh17-201ENSMUST00000071370 RelnQ60841 3461 aa3.72□□□□□ -1.81
Pcdh17-201ENSMUST00000071370 Wdfy3Q6VNB8 3508 aa3.72□□□□□ -1.81
Pcdh17-201ENSMUST00000071370 Gm9736A0A1W2P7N1 277 aa3.72□□□□□ -1.81
Pcdh17-201ENSMUST00000071370 Cmya5Q70KF4 3739 aa3.7□□□□□ -1.82
Pcdh17-201ENSMUST00000071370 Dchs1E9PVD3 3291 aa3.7□□□□□ -1.82
Pcdh17-201ENSMUST00000071370 Krtap3-2Q9D638 99 aa3.69□□□□□ -1.82
Pcdh17-201ENSMUST00000071370 Krtap3-3Q9D7P0 99 aa3.69□□□□□ -1.82
Pcdh17-201ENSMUST00000071370 Smg1Q8BKX6 3658 aaKnown RBP3.69□□□□□ -1.82
Pcdh17-201ENSMUST00000071370 Csmd1Q923L3 3564 aa3.69□□□□□ -1.82
Pcdh17-201ENSMUST00000071370 Gm19668J3QMD1 248 aa3.66□□□□□ -1.82
Pcdh17-201ENSMUST00000071370 Lama5Q61001 3718 aa3.65□□□□□ -1.82
Pcdh17-201ENSMUST00000071370 Zfhx4Q9JJN2 3550 aa3.65□□□□□ -1.82
Pcdh17-201ENSMUST00000071370 Gm884A2A9H6 3643 aa3.63□□□□□ -1.83
Pcdh17-201ENSMUST00000071370 Gm11939A2A592 99 aa3.62□□□□□ -1.83
Pcdh17-201ENSMUST00000071370 Muc5acE9QAQ8 3455 aa3.61□□□□□ -1.83
Pcdh17-201ENSMUST00000071370 Gm10318A0A1W2P728 225 aa3.57□□□□□ -1.84
Pcdh17-201ENSMUST00000071370 Krtap3-1A2A591 98 aa3.54□□□□□ -1.84
Pcdh17-201ENSMUST00000071370 Crct1Q6PAI5 102 aa3.51□□□□□ -1.85
Pcdh17-201ENSMUST00000071370 Krtap13-1Q8K198 168 aa3.51□□□□□ -1.85
Pcdh17-201ENSMUST00000071370 Gm6358A0A087WPH4 74 aa3.5□□□□□ -1.85
Pcdh17-201ENSMUST00000071370 Krtap7-1Q9D3I6 87 aa3.5□□□□□ -1.85
Pcdh17-201ENSMUST00000071370 Dnah3Q8BW94 4083 aa3.49□□□□□ -1.85
Pcdh17-201ENSMUST00000071370 Xirp2Q4U4S6 3784 aa3.49□□□□□ -1.85
Pcdh17-201ENSMUST00000071370 LystP97412 3788 aa3.48□□□□□ -1.85
Pcdh17-201ENSMUST00000071370 BsnO88737 3942 aa3.48□□□□□ -1.85
Pcdh17-201ENSMUST00000071370 Sprr2kO70562 68 aa3.43□□□□□ -1.86
Pcdh17-201ENSMUST00000071370 Krtap19-5O08632 62 aa3.43□□□□□ -1.86
Pcdh17-201ENSMUST00000071370 Dnah7bL7N1Y0 4068 aa3.4□□□□□ -1.87
Pcdh17-201ENSMUST00000071370 Sprr2a3Q4KL71 83 aa3.39□□□□□ -1.87
Pcdh17-201ENSMUST00000071370 Sprr2a1Q9CQK8 83 aa3.39□□□□□ -1.87
Pcdh17-201ENSMUST00000071370 Svep1A2AVA0 3567 aa3.36□□□□□ -1.87
Pcdh17-201ENSMUST00000071370 Krtap8-1O08633 61 aa3.33□□□□□ -1.88
Pcdh17-201ENSMUST00000071370 Muc4Q8JZM8 3443 aa3.33□□□□□ -1.88
Pcdh17-201ENSMUST00000071370 Sprr2gO70558 76 aa3.32□□□□□ -1.88
Pcdh17-201ENSMUST00000071370 Csmd2V9GX34 3611 aa3.31□□□□□ -1.88
Pcdh17-201ENSMUST00000071370 Hspg2Q05793 3707 aaKnown RBP3.3□□□□□ -1.88
Pcdh17-201ENSMUST00000071370 Krtap1-5A2A590 122 aa3.3□□□□□ -1.88
Pcdh17-201ENSMUST00000071370 Kmt2aP55200 3966 aa3.24□□□□□ -1.89
Pcdh17-201ENSMUST00000071370 Krtap19-9aF8WH65 55 aa3.24□□□□□ -1.89
Pcdh17-201ENSMUST00000071370 Gm18596A0A1W2P860 280 aa3.22□□□□□ -1.89
Pcdh17-201ENSMUST00000071370 Dnah6E9Q0B6 4144 aa3.21□□□□□ -1.9
Pcdh17-201ENSMUST00000071370 Dnah10D3YYQ8 4591 aa3.2□□□□□ -1.9
Pcdh17-201ENSMUST00000071370 Dnah7aE9Q0T8 4024 aa3.19□□□□□ -1.9
Pcdh17-201ENSMUST00000071370 TnxbO35452 4006 aa3.18□□□□□ -1.9
Pcdh17-201ENSMUST00000071370 Csmd3Q80T79 3707 aa3.18□□□□□ -1.9
Pcdh17-201ENSMUST00000071370 Huwe1Q7TMY8 4377 aaKnown RBP3.17□□□□□ -1.9
Pcdh17-201ENSMUST00000071370 Dnah7cA0A087WR13 4024 aa3.17□□□□□ -1.9
Retrieved 100 of 22,080 RNA–protein pairs in 128.7 ms