RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Uqcr11Q9CPX8 56 aa5□□□□□ -1.61
Cdc40-201ENSMUST00000044166 Gm27235Q3UW50 83 aa5□□□□□ -1.61
Cdc40-201ENSMUST00000044166 Fn1P11276 2477 aaKnown RBP5□□□□□ -1.61
Cdc40-201ENSMUST00000044166 Dnah1E9Q8T7 4250 aa4.99□□□□□ -1.61
Cdc40-201ENSMUST00000044166 Tenm2Q9WTS5 2764 aa4.98□□□□□ -1.61
Cdc40-201ENSMUST00000044166 Dnah17Q69Z23 4481 aa4.98□□□□□ -1.61
Cdc40-201ENSMUST00000044166 Csmd3Q80T79 3707 aa4.97□□□□□ -1.61
Cdc40-201ENSMUST00000044166 2310061N02RikQ9D6S9 174 aa4.97□□□□□ -1.61
Cdc40-201ENSMUST00000044166 Pkd1l1Q8R526 2615 aa4.97□□□□□ -1.61
Cdc40-201ENSMUST00000044166 Defb1P56386 69 aa4.97□□□□□ -1.61
Cdc40-201ENSMUST00000044166 AW011738F6S7Q2 159 aa4.96□□□□□ -1.62
Cdc40-201ENSMUST00000044166 Gm10642Q3TWM1 71 aa4.96□□□□□ -1.62
Cdc40-201ENSMUST00000044166 Dnah10D3YYQ8 4591 aa4.95□□□□□ -1.62
Cdc40-201ENSMUST00000044166 Gm3880A0A1B0GSB3 72 aa4.94□□□□□ -1.62
Cdc40-201ENSMUST00000044166 Defb10Q8R2I8 73 aa4.94□□□□□ -1.62
Cdc40-201ENSMUST00000044166 Gm36176A0A1W2P8D5 158 aa4.94□□□□□ -1.62
Cdc40-201ENSMUST00000044166 Dnah14A0A140LIJ4 4489 aa4.94□□□□□ -1.62
Cdc40-201ENSMUST00000044166 Gm21798J3QNU5 87 aa4.94□□□□□ -1.62
Cdc40-201ENSMUST00000044166 Dnah11E9Q7N9 4488 aa4.94□□□□□ -1.62
Cdc40-201ENSMUST00000044166 Nupr2Q497P3 102 aa4.93□□□□□ -1.62
Cdc40-201ENSMUST00000044166 TnxbO35452 4006 aa4.9□□□□□ -1.62
Cdc40-201ENSMUST00000044166 Gm16253D3Z167 63 aa4.9□□□□□ -1.62
Cdc40-201ENSMUST00000044166 Stab2Q8R4U0 2559 aa4.89□□□□□ -1.63
Cdc40-201ENSMUST00000044166 Gm10065F6TJM2 114 aa4.89□□□□□ -1.63
Cdc40-201ENSMUST00000044166 Defb13Q8R2I4 64 aa4.89□□□□□ -1.63
Cdc40-201ENSMUST00000044166 Gm9508A0A1W2P7W0 230 aa4.86□□□□□ -1.63
Cdc40-201ENSMUST00000044166 Wfdc17Q5SSJ1 76 aa4.86□□□□□ -1.63
Cdc40-201ENSMUST00000044166 Anapc11Q9CPX9 84 aa4.86□□□□□ -1.63
Cdc40-201ENSMUST00000044166 Adm2Q7TNK8 150 aa4.85□□□□□ -1.63
Cdc40-201ENSMUST00000044166 Krtap29-1A2A5X4 342 aa4.84□□□□□ -1.63
Cdc40-201ENSMUST00000044166 Dnah6E9Q0B6 4144 aa4.84□□□□□ -1.63
Cdc40-201ENSMUST00000044166 Muc6Q80T03 2850 aa4.84□□□□□ -1.63
Cdc40-201ENSMUST00000044166 Dnah9B1AR51 4484 aa4.84□□□□□ -1.64
Cdc40-201ENSMUST00000044166 NbdyA0A0N4SUI7 68 aa4.83□□□□□ -1.64
Cdc40-201ENSMUST00000044166 Krtap14O08640 167 aa4.82□□□□□ -1.64
Cdc40-201ENSMUST00000044166 Defb39Q70KL3 74 aa4.82□□□□□ -1.64
Cdc40-201ENSMUST00000044166 Defb11Q8R2I7 77 aa4.81□□□□□ -1.64
Cdc40-201ENSMUST00000044166 Gm9112A2AI92 75 aa4.8□□□□□ -1.64
Cdc40-201ENSMUST00000044166 Gm10999F6Q4M4 69 aa4.79□□□□□ -1.64
Cdc40-201ENSMUST00000044166 Rnase13Q5GAM7 153 aa4.79□□□□□ -1.64
Cdc40-201ENSMUST00000044166 RetnlbQ99P86 105 aa4.77□□□□□ -1.65
Cdc40-201ENSMUST00000044166 Dync2h1Q45VK7 4306 aa4.77□□□□□ -1.65
Cdc40-201ENSMUST00000044166 1600014C23RikQ9DAX4 101 aa4.76□□□□□ -1.65
Cdc40-201ENSMUST00000044166 Sec61bQ9CQS8 96 aaKnown RBP4.75□□□□□ -1.65
Cdc40-201ENSMUST00000044166 Tnp2P11378 117 aa4.75□□□□□ -1.65
Cdc40-201ENSMUST00000044166 Huwe1Q7TMY8 4377 aaKnown RBP4.74□□□□□ -1.65
Cdc40-201ENSMUST00000044166 Gpr15lA0A0B4J1N3 78 aa4.73□□□□□ -1.65
Cdc40-201ENSMUST00000044166 Spaca4Q80ZQ0 127 aa4.73□□□□□ -1.65
Cdc40-201ENSMUST00000044166 Wfdc3Q14AE4 130 aa4.73□□□□□ -1.65
Cdc40-201ENSMUST00000044166 Gm17349F7BGH6 99 aa4.72□□□□□ -1.65
Cdc40-201ENSMUST00000044166 A0A1Y7VJH8 109 aa4.72□□□□□ -1.65
Cdc40-201ENSMUST00000044166 2310050C09RikG5E8Z3 280 aa4.69□□□□□ -1.66
Cdc40-201ENSMUST00000044166 2310079G19RikQ9D6L6 185 aa4.68□□□□□ -1.66
Cdc40-201ENSMUST00000044166 Fras1Q80T14 4010 aa4.68□□□□□ -1.66
Cdc40-201ENSMUST00000044166 PlecQ9QXS1 4691 aaKnown RBP4.67□□□□□ -1.66
Cdc40-201ENSMUST00000044166 Gm4491E0CX42 125 aa4.67□□□□□ -1.66
Cdc40-201ENSMUST00000044166 4930507D05RikQ8C9C9 103 aa4.66□□□□□ -1.66
Cdc40-201ENSMUST00000044166 Gm9507D3Z5T3 223 aa4.64□□□□□ -1.67
Cdc40-201ENSMUST00000044166 Gm20537G3UYK7 97 aa4.64□□□□□ -1.67
Cdc40-201ENSMUST00000044166 Krtap13O88375 197 aa4.63□□□□□ -1.67
Cdc40-201ENSMUST00000044166 PrkdcP97313 4128 aa4.63□□□□□ -1.67
Cdc40-201ENSMUST00000044166 Hectd4E9Q2E4 4418 aa4.63□□□□□ -1.67
Cdc40-201ENSMUST00000044166 Dnah7cA0A087WR13 4024 aa4.62□□□□□ -1.67
Cdc40-201ENSMUST00000044166 Dnah5Q8VHE6 4621 aa4.62□□□□□ -1.67
Cdc40-201ENSMUST00000044166 2310057N15RikQ9D6T8 200 aa4.62□□□□□ -1.67
Cdc40-201ENSMUST00000044166 A930033H14RikG5E8X6 103 aa4.6□□□□□ -1.67
Cdc40-201ENSMUST00000044166 Krtap3-2Q9D638 99 aa4.59□□□□□ -1.67
Cdc40-201ENSMUST00000044166 Krtap3-3Q9D7P0 99 aa4.59□□□□□ -1.67
Cdc40-201ENSMUST00000044166 Dnah2P0C6F1 4456 aa4.59□□□□□ -1.67
Cdc40-201ENSMUST00000044166 D6Ertd527eA0A0N4SWI3 464 aa4.59□□□□□ -1.68
Cdc40-201ENSMUST00000044166 Gm9918Q8BUR5 174 aa4.58□□□□□ -1.68
Cdc40-201ENSMUST00000044166 Ly6g6cQ9Z1Q4 126 aa4.56□□□□□ -1.68
Cdc40-201ENSMUST00000044166 Gm5965D3Z724 196 aa4.56□□□□□ -1.68
Cdc40-201ENSMUST00000044166 Vps13dB1ART2 4390 aa4.55□□□□□ -1.68
Cdc40-201ENSMUST00000044166 Krtap10-4Q08EG8 221 aa4.54□□□□□ -1.68
Cdc40-201ENSMUST00000044166 Dnah7aE9Q0T8 4024 aa4.53□□□□□ -1.68
Cdc40-201ENSMUST00000044166 Gm10382Q3V0T5 144 aa4.53□□□□□ -1.68
Cdc40-201ENSMUST00000044166 Krtap15-1Q9QZU5 150 aa4.52□□□□□ -1.69
Cdc40-201ENSMUST00000044166 Stard9Q80TF6 4561 aa4.5□□□□□ -1.69
Cdc40-201ENSMUST00000044166 Lrp1bQ9JI18 4599 aa4.5□□□□□ -1.69
Cdc40-201ENSMUST00000044166 Pkd1O08852 4293 aa4.49□□□□□ -1.69
Cdc40-201ENSMUST00000044166 ApobE9Q414 4505 aa4.48□□□□□ -1.69
Cdc40-201ENSMUST00000044166 Krtap28-10A0A1Y7VP58 119 aa4.47□□□□□ -1.69
Cdc40-201ENSMUST00000044166 Cox6b2Q80ZN9 88 aa4.46□□□□□ -1.69
Cdc40-201ENSMUST00000044166 Rps29P62274 56 aa4.43□□□□□ -1.7
Cdc40-201ENSMUST00000044166 Gm17606F6ZL36 78 aa4.43□□□□□ -1.7
Cdc40-201ENSMUST00000044166 Gm11939A2A592 99 aa4.41□□□□□ -1.7
Cdc40-201ENSMUST00000044166 Ryr1E9PZQ0 5035 aa4.4□□□□□ -1.71
Cdc40-201ENSMUST00000044166 Gm9955Q8CEJ8 102 aa4.39□□□□□ -1.71
Cdc40-201ENSMUST00000044166 Pkhd1E9PZ36 4059 aa4.37□□□□□ -1.71
Cdc40-201ENSMUST00000044166 SacsQ9JLC8 4582 aa4.37□□□□□ -1.71
Cdc40-201ENSMUST00000044166 Rpl37Q9D823 97 aa4.35□□□□□ -1.71
Cdc40-201ENSMUST00000044166 Gm19668J3QMD1 248 aa4.35□□□□□ -1.71
Cdc40-201ENSMUST00000044166 Gm2696A0A1W2P709 240 aa4.34□□□□□ -1.71
Cdc40-201ENSMUST00000044166 Fat2Q5F226 4351 aa4.32□□□□□ -1.72
Cdc40-201ENSMUST00000044166 Gm5767A0A0J9YTU8 78 aa4.29□□□□□ -1.72
Cdc40-201ENSMUST00000044166 A0A1Y7VLE6 161 aa4.28□□□□□ -1.72
Cdc40-201ENSMUST00000044166 Vps13bQ80TY5 3993 aa4.26□□□□□ -1.73
Cdc40-201ENSMUST00000044166 B930094E09RikQ8C4T2 136 aa4.24□□□□□ -1.73
Cdc40-201ENSMUST00000044166 Fat1A0A1L1SQU7 4645 aa4.23□□□□□ -1.73
Retrieved 100 of 22,080 RNA–protein pairs in 51.9 ms