RNA–Protein interactions for RNA: ENSMUST00000042824.12

Herc1-201, Transcript of HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Herc1, Length 15,153 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1-201ENSMUST00000042824 Romo1P60603 79 aa3.41□□□□□ -1.86
Herc1-201ENSMUST00000042824 Dchs2A0A0A6YW72 3346 aa3.4□□□□□ -1.87
Herc1-201ENSMUST00000042824 4933415A04RikQ9D443 101 aa3.39□□□□□ -1.87
Herc1-201ENSMUST00000042824 Camk2n1Q6QWF9 78 aa3.38□□□□□ -1.87
Herc1-201ENSMUST00000042824 Gm9508A0A1W2P7W0 230 aa3.38□□□□□ -1.87
Herc1-201ENSMUST00000042824 BC029722A0A0N4SW31 51 aa3.37□□□□□ -1.87
Herc1-201ENSMUST00000042824 Rpl37Q9D823 97 aa3.35□□□□□ -1.87
Herc1-201ENSMUST00000042824 Gm2310J3QNJ2 377 aa3.35□□□□□ -1.87
Herc1-201ENSMUST00000042824 Gm9507D3Z5T3 223 aa3.35□□□□□ -1.87
Herc1-201ENSMUST00000042824 Gm10382Q3V0T5 144 aa3.34□□□□□ -1.87
Herc1-201ENSMUST00000042824 Col6a3E9PWQ3 3284 aa3.34□□□□□ -1.87
Herc1-201ENSMUST00000042824 Brca2P97929 3329 aa3.33□□□□□ -1.88
Herc1-201ENSMUST00000042824 SmcpP15265 143 aa3.33□□□□□ -1.88
Herc1-201ENSMUST00000042824 Gm19426M0QWC7 77 aa3.32□□□□□ -1.88
Herc1-201ENSMUST00000042824 OtogO55225 2910 aa3.32□□□□□ -1.88
Herc1-201ENSMUST00000042824 Helz2E9QAM5 2947 aaKnown RBP3.31□□□□□ -1.88
Herc1-201ENSMUST00000042824 D6Ertd527eA0A0N4SWI3 464 aa3.3□□□□□ -1.88
Herc1-201ENSMUST00000042824 VcanQ62059 3357 aa3.29□□□□□ -1.88
Herc1-201ENSMUST00000042824 SpegQ62407 3262 aa3.29□□□□□ -1.88
Herc1-201ENSMUST00000042824 Ndufaf8A2AMZ4 74 aa3.28□□□□□ -1.89
Herc1-201ENSMUST00000042824 Cox6b2Q80ZN9 88 aa3.27□□□□□ -1.89
Herc1-201ENSMUST00000042824 Tenm2Q9WTS5 2764 aa3.26□□□□□ -1.89
Herc1-201ENSMUST00000042824 Gm9112A2AI92 75 aa3.26□□□□□ -1.89
Herc1-201ENSMUST00000042824 Dchs1E9PVD3 3291 aa3.24□□□□□ -1.89
Herc1-201ENSMUST00000042824 Krtap10-4Q08EG8 221 aa3.24□□□□□ -1.89
Herc1-201ENSMUST00000042824 Ank2Q8C8R3 3898 aa3.24□□□□□ -1.89
Herc1-201ENSMUST00000042824 Megf8P60882 2789 aa3.24□□□□□ -1.89
Herc1-201ENSMUST00000042824 VwfQ8CIZ8 2813 aa3.22□□□□□ -1.89
Herc1-201ENSMUST00000042824 Vps13cQ8BX70 3748 aa3.22□□□□□ -1.89
Herc1-201ENSMUST00000042824 Akap9Q70FJ1 3797 aa3.21□□□□□ -1.89
Herc1-201ENSMUST00000042824 RelnQ60841 3461 aa3.21□□□□□ -1.9
Herc1-201ENSMUST00000042824 Krtap10-10A0A1W2P7T6 217 aa3.19□□□□□ -1.9
Herc1-201ENSMUST00000042824 DmdP11531 3678 aa3.18□□□□□ -1.9
Herc1-201ENSMUST00000042824 Myo15aQ9QZZ4 3511 aa3.17□□□□□ -1.9
Herc1-201ENSMUST00000042824 Gm2696A0A1W2P709 240 aa3.17□□□□□ -1.9
Herc1-201ENSMUST00000042824 A930033H14RikG5E8X6 103 aa3.16□□□□□ -1.9
Herc1-201ENSMUST00000042824 Muc5acE9QAQ8 3455 aa3.15□□□□□ -1.9
Herc1-201ENSMUST00000042824 Col7a1Q63870 2944 aa3.15□□□□□ -1.9
Herc1-201ENSMUST00000042824 Gm17416Q30KP4 66 aa3.14□□□□□ -1.91
Herc1-201ENSMUST00000042824 Wdfy3Q6VNB8 3508 aa3.14□□□□□ -1.91
Herc1-201ENSMUST00000042824 Muc6Q80T03 2850 aa3.14□□□□□ -1.91
Herc1-201ENSMUST00000042824 Fbn1Q61554 2873 aaKnown RBP3.13□□□□□ -1.91
Herc1-201ENSMUST00000042824 Gm40193A0A1B0GT39 78 aa3.12□□□□□ -1.91
Herc1-201ENSMUST00000042824 Gm5965D3Z724 196 aa3.12□□□□□ -1.91
Herc1-201ENSMUST00000042824 Zfhx4Q9JJN2 3550 aa3.1□□□□□ -1.91
Herc1-201ENSMUST00000042824 Gm21887J3QQ04 176 aa3.08□□□□□ -1.92
Herc1-201ENSMUST00000042824 Zfhx3Q61329 3726 aa3.07□□□□□ -1.92
Herc1-201ENSMUST00000042824 Lama5Q61001 3718 aa3.06□□□□□ -1.92
Herc1-201ENSMUST00000042824 Tnp1P10856 55 aa3.06□□□□□ -1.92
Herc1-201ENSMUST00000042824 Prm2P07978 107 aa3.05□□□□□ -1.92
Herc1-201ENSMUST00000042824 2210017I01RikA0A0A6YVV1 95 aa3.03□□□□□ -1.92
Herc1-201ENSMUST00000042824 Gm17402F6Z0L5 76 aa3.02□□□□□ -1.93
Herc1-201ENSMUST00000042824 Smg1Q8BKX6 3658 aaKnown RBP3.01□□□□□ -1.93
Herc1-201ENSMUST00000042824 Muc4Q8JZM8 3443 aa3□□□□□ -1.93
Herc1-201ENSMUST00000042824 2310079G19RikQ9D6L6 185 aa3□□□□□ -1.93
Herc1-201ENSMUST00000042824 2310057N15RikQ9D6T8 200 aa2.99□□□□□ -1.93
Herc1-201ENSMUST00000042824 Gm20537G3UYK7 97 aa2.98□□□□□ -1.93
Herc1-201ENSMUST00000042824 B930094E09RikQ8C4T2 136 aa2.95□□□□□ -1.94
Herc1-201ENSMUST00000042824 Krtap19-5O08632 62 aa2.93□□□□□ -1.94
Herc1-201ENSMUST00000042824 Gm9918Q8BUR5 174 aa2.92□□□□□ -1.94
Herc1-201ENSMUST00000042824 Gm11939A2A592 99 aa2.92□□□□□ -1.94
Herc1-201ENSMUST00000042824 SpenQ62504 3644 aaKnown RBP2.87□□□□□ -1.95
Herc1-201ENSMUST00000042824 Csmd1Q923L3 3564 aa2.87□□□□□ -1.95
Herc1-201ENSMUST00000042824 Gm9736A0A1W2P7N1 277 aa2.85□□□□□ -1.95
Herc1-201ENSMUST00000042824 Gm884A2A9H6 3643 aa2.85□□□□□ -1.95
Herc1-201ENSMUST00000042824 Cmya5Q70KF4 3739 aa2.84□□□□□ -1.95
Herc1-201ENSMUST00000042824 Vps13dB1ART2 4390 aa2.83□□□□□ -1.96
Herc1-201ENSMUST00000042824 Huwe1Q7TMY8 4377 aaKnown RBP2.82□□□□□ -1.96
Herc1-201ENSMUST00000042824 TnxbO35452 4006 aa2.82□□□□□ -1.96
Herc1-201ENSMUST00000042824 Krtap3-2Q9D638 99 aa2.8□□□□□ -1.96
Herc1-201ENSMUST00000042824 Krtap3-3Q9D7P0 99 aa2.8□□□□□ -1.96
Herc1-201ENSMUST00000042824 Dnah14A0A140LIJ4 4489 aa2.8□□□□□ -1.96
Herc1-201ENSMUST00000042824 Krtap13-1Q8K198 168 aa2.79□□□□□ -1.96
Herc1-201ENSMUST00000042824 Csmd2V9GX34 3611 aa2.78□□□□□ -1.96
Herc1-201ENSMUST00000042824 Svep1A2AVA0 3567 aa2.76□□□□□ -1.97
Herc1-201ENSMUST00000042824 PrkdcP97313 4128 aa2.76□□□□□ -1.97
Herc1-201ENSMUST00000042824 Gm19668J3QMD1 248 aa2.75□□□□□ -1.97
Herc1-201ENSMUST00000042824 Dnah17Q69Z23 4481 aa2.74□□□□□ -1.97
Herc1-201ENSMUST00000042824 Krtap3-1A2A591 98 aa2.73□□□□□ -1.97
Herc1-201ENSMUST00000042824 LystP97412 3788 aa2.71□□□□□ -1.97
Herc1-201ENSMUST00000042824 4933428G20RikQ9D3X4 101 aa2.71□□□□□ -1.97
Herc1-201ENSMUST00000042824 Dync2h1Q45VK7 4306 aa2.71□□□□□ -1.98
Herc1-201ENSMUST00000042824 PlecQ9QXS1 4691 aaKnown RBP2.7□□□□□ -1.98
Herc1-201ENSMUST00000042824 Dnah3Q8BW94 4083 aa2.7□□□□□ -1.98
Herc1-201ENSMUST00000042824 Dnah5Q8VHE6 4621 aa2.69□□□□□ -1.98
Herc1-201ENSMUST00000042824 BsnO88737 3942 aa2.68□□□□□ -1.98
Herc1-201ENSMUST00000042824 Dnah10D3YYQ8 4591 aa2.67□□□□□ -1.98
Herc1-201ENSMUST00000042824 Stard9Q80TF6 4561 aa2.67□□□□□ -1.98
Herc1-201ENSMUST00000042824 Krtap1-5A2A590 122 aa2.66□□□□□ -1.98
Herc1-201ENSMUST00000042824 Xirp2Q4U4S6 3784 aa2.65□□□□□ -1.98
Herc1-201ENSMUST00000042824 Dnah1E9Q8T7 4250 aa2.63□□□□□ -1.99
Herc1-201ENSMUST00000042824 Dnah7bL7N1Y0 4068 aa2.62□□□□□ -1.99
Herc1-201ENSMUST00000042824 Ryr1E9PZQ0 5035 aa2.62□□□□□ -1.99
Herc1-201ENSMUST00000042824 Fras1Q80T14 4010 aa2.61□□□□□ -1.99
Herc1-201ENSMUST00000042824 Pkd1O08852 4293 aa2.6□□□□□ -1.99
Herc1-201ENSMUST00000042824 Crct1Q6PAI5 102 aa2.59□□□□□ -2
Herc1-201ENSMUST00000042824 CubnQ9JLB4 3623 aa2.59□□□□□ -2
Herc1-201ENSMUST00000042824 Krtap19-9aF8WH65 55 aa2.58□□□□□ -2
Herc1-201ENSMUST00000042824 Dnah6E9Q0B6 4144 aa2.57□□□□□ -2
Herc1-201ENSMUST00000042824 ApobE9Q414 4505 aa2.57□□□□□ -2
Retrieved 100 of 22,080 RNA–protein pairs in 142.7 ms