RNA–Protein interactions for RNA: ENSMUST00000025989.8

Tm9sf3-201, Transcript of Transmembrane 9 superfamily member 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tm9sf3, Length 6,144 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tm9sf3-201ENSMUST00000025989 Rps29P62274 56 aa11.39□□□□□ -0.59
Tm9sf3-201ENSMUST00000025989 Trank1Q8BV79 2999 aa11.39□□□□□ -0.59
Tm9sf3-201ENSMUST00000025989 TgO08710 2766 aa11.38□□□□□ -0.59
Tm9sf3-201ENSMUST00000025989 Nf1Q04690 2841 aa11.36□□□□□ -0.59
Tm9sf3-201ENSMUST00000025989 VcanQ62059 3357 aa11.35□□□□□ -0.59
Tm9sf3-201ENSMUST00000025989 Chd9Q8BYH8 2885 aa11.34□□□□□ -0.59
Tm9sf3-201ENSMUST00000025989 ApcQ61315 2845 aa11.31□□□□□ -0.6
Tm9sf3-201ENSMUST00000025989 Gm2310J3QNJ2 377 aa11.28□□□□□ -0.6
Tm9sf3-201ENSMUST00000025989 Pdzd2E9Q1M1 2796 aa11.27□□□□□ -0.61
Tm9sf3-201ENSMUST00000025989 Gm3646F6S692 53 aa11.25□□□□□ -0.61
Tm9sf3-201ENSMUST00000025989 Romo1P60603 79 aa11.24□□□□□ -0.61
Tm9sf3-201ENSMUST00000025989 Tenm3Q9WTS6 2715 aa11.2□□□□□ -0.62
Tm9sf3-201ENSMUST00000025989 Gm5965D3Z724 196 aa11.2□□□□□ -0.62
Tm9sf3-201ENSMUST00000025989 Dchs1E9PVD3 3291 aa11.2□□□□□ -0.62
Tm9sf3-201ENSMUST00000025989 Gm10382Q3V0T5 144 aa11.17□□□□□ -0.62
Tm9sf3-201ENSMUST00000025989 2310057N15RikQ9D6T8 200 aa11.15□□□□□ -0.63
Tm9sf3-201ENSMUST00000025989 SpegQ62407 3262 aa11.1□□□□□ -0.63
Tm9sf3-201ENSMUST00000025989 Cox6b2Q80ZN9 88 aa11.09□□□□□ -0.63
Tm9sf3-201ENSMUST00000025989 LrbaQ9ESE1 2856 aa11.04□□□□□ -0.64
Tm9sf3-201ENSMUST00000025989 Myo15aQ9QZZ4 3511 aa11□□□□□ -0.65
Tm9sf3-201ENSMUST00000025989 Tenm1Q9WTS4 2731 aa10.99□□□□□ -0.65
Tm9sf3-201ENSMUST00000025989 D6Ertd527eA0A0N4SWI3 464 aa10.98□□□□□ -0.65
Tm9sf3-201ENSMUST00000025989 Zfhx3Q61329 3726 aa10.98□□□□□ -0.65
Tm9sf3-201ENSMUST00000025989 RelnQ60841 3461 aa10.9□□□□□ -0.66
Tm9sf3-201ENSMUST00000025989 Tenm2Q9WTS5 2764 aa10.88□□□□□ -0.67
Tm9sf3-201ENSMUST00000025989 4933415A04RikQ9D443 101 aa10.84□□□□□ -0.67
Tm9sf3-201ENSMUST00000025989 A930033H14RikG5E8X6 103 aa10.81□□□□□ -0.68
Tm9sf3-201ENSMUST00000025989 Muc5acE9QAQ8 3455 aa10.79□□□□□ -0.68
Tm9sf3-201ENSMUST00000025989 Helz2E9QAM5 2947 aaKnown RBP10.75□□□□□ -0.69
Tm9sf3-201ENSMUST00000025989 Gm21887J3QQ04 176 aa10.75□□□□□ -0.69
Tm9sf3-201ENSMUST00000025989 Wdfy3Q6VNB8 3508 aa10.74□□□□□ -0.69
Tm9sf3-201ENSMUST00000025989 Akap9Q70FJ1 3797 aa10.7□□□□□ -0.7
Tm9sf3-201ENSMUST00000025989 1700042G07RikB1AUF7 90 aa10.62□□□□□ -0.71
Tm9sf3-201ENSMUST00000025989 OtogO55225 2910 aa10.57□□□□□ -0.72
Tm9sf3-201ENSMUST00000025989 Gm9736A0A1W2P7N1 277 aa10.56□□□□□ -0.72
Tm9sf3-201ENSMUST00000025989 Vps13cQ8BX70 3748 aa10.56□□□□□ -0.72
Tm9sf3-201ENSMUST00000025989 SmcpP15265 143 aa10.44□□□□□ -0.74
Tm9sf3-201ENSMUST00000025989 Megf8P60882 2789 aa10.41□□□□□ -0.74
Tm9sf3-201ENSMUST00000025989 DmdP11531 3678 aa10.37□□□□□ -0.75
Tm9sf3-201ENSMUST00000025989 Tnp1P10856 55 aa10.33□□□□□ -0.76
Tm9sf3-201ENSMUST00000025989 VwfQ8CIZ8 2813 aa10.32□□□□□ -0.76
Tm9sf3-201ENSMUST00000025989 Col7a1Q63870 2944 aa10.2□□□□□ -0.78
Tm9sf3-201ENSMUST00000025989 Gm20537G3UYK7 97 aa10.17□□□□□ -0.78
Tm9sf3-201ENSMUST00000025989 Fbn1Q61554 2873 aaKnown RBP10.15□□□□□ -0.78
Tm9sf3-201ENSMUST00000025989 Gm17416Q30KP4 66 aa10.15□□□□□ -0.78
Tm9sf3-201ENSMUST00000025989 Lama5Q61001 3718 aa10.15□□□□□ -0.79
Tm9sf3-201ENSMUST00000025989 B930094E09RikQ8C4T2 136 aa10.14□□□□□ -0.79
Tm9sf3-201ENSMUST00000025989 Gm9918Q8BUR5 174 aa10.1□□□□□ -0.79
Tm9sf3-201ENSMUST00000025989 Gm10318A0A1W2P728 225 aa10.08□□□□□ -0.8
Tm9sf3-201ENSMUST00000025989 Smg1Q8BKX6 3658 aaKnown RBP10.08□□□□□ -0.8
Tm9sf3-201ENSMUST00000025989 2310079G19RikQ9D6L6 185 aa10.07□□□□□ -0.8
Tm9sf3-201ENSMUST00000025989 Ndufaf8A2AMZ4 74 aa10.06□□□□□ -0.8
Tm9sf3-201ENSMUST00000025989 Gm40193A0A1B0GT39 78 aa10.02□□□□□ -0.81
Tm9sf3-201ENSMUST00000025989 Csmd1Q923L3 3564 aa10.02□□□□□ -0.81
Tm9sf3-201ENSMUST00000025989 Krtap19-5O08632 62 aa9.98□□□□□ -0.81
Tm9sf3-201ENSMUST00000025989 2210017I01RikA0A0A6YVV1 95 aa9.98□□□□□ -0.81
Tm9sf3-201ENSMUST00000025989 Zfhx4Q9JJN2 3550 aa9.96□□□□□ -0.82
Tm9sf3-201ENSMUST00000025989 Crct1Q6PAI5 102 aa9.92□□□□□ -0.82
Tm9sf3-201ENSMUST00000025989 Prm2P07978 107 aa9.84□□□□□ -0.83
Tm9sf3-201ENSMUST00000025989 SpenQ62504 3644 aaKnown RBP9.78□□□□□ -0.84
Tm9sf3-201ENSMUST00000025989 Muc6Q80T03 2850 aa9.77□□□□□ -0.85
Tm9sf3-201ENSMUST00000025989 Gm11939A2A592 99 aa9.74□□□□□ -0.85
Tm9sf3-201ENSMUST00000025989 Muc4Q8JZM8 3443 aa9.62□□□□□ -0.87
Tm9sf3-201ENSMUST00000025989 Krtap13-1Q8K198 168 aa9.61□□□□□ -0.87
Tm9sf3-201ENSMUST00000025989 Gm17402F6Z0L5 76 aa9.6□□□□□ -0.87
Tm9sf3-201ENSMUST00000025989 Gm9112A2AI92 75 aa9.59□□□□□ -0.87
Tm9sf3-201ENSMUST00000025989 Ank2Q8C8R3 3898 aa9.58□□□□□ -0.88
Tm9sf3-201ENSMUST00000025989 Svep1A2AVA0 3567 aa9.55□□□□□ -0.88
Tm9sf3-201ENSMUST00000025989 Gm19668J3QMD1 248 aa9.5□□□□□ -0.89
Tm9sf3-201ENSMUST00000025989 Gm884A2A9H6 3643 aa9.48□□□□□ -0.89
Tm9sf3-201ENSMUST00000025989 Cmya5Q70KF4 3739 aa9.43□□□□□ -0.9
Tm9sf3-201ENSMUST00000025989 Csmd2V9GX34 3611 aa9.42□□□□□ -0.9
Tm9sf3-201ENSMUST00000025989 Krtap3-1A2A591 98 aa9.21□□□□□ -0.93
Tm9sf3-201ENSMUST00000025989 Krtap3-2Q9D638 99 aa9.2□□□□□ -0.94
Tm9sf3-201ENSMUST00000025989 Krtap3-3Q9D7P0 99 aa9.2□□□□□ -0.94
Tm9sf3-201ENSMUST00000025989 Gm18596A0A1W2P860 280 aa9.19□□□□□ -0.94
Tm9sf3-201ENSMUST00000025989 Dnah14A0A140LIJ4 4489 aa9.19□□□□□ -0.94
Tm9sf3-201ENSMUST00000025989 4933428G20RikQ9D3X4 101 aa9.18□□□□□ -0.94
Tm9sf3-201ENSMUST00000025989 Huwe1Q7TMY8 4377 aaKnown RBP9.08□□□□□ -0.96
Tm9sf3-201ENSMUST00000025989 LystP97412 3788 aa9.06□□□□□ -0.96
Tm9sf3-201ENSMUST00000025989 LorP18165 486 aa8.92□□□□□ -0.98
Tm9sf3-201ENSMUST00000025989 Dnah10D3YYQ8 4591 aa8.92□□□□□ -0.98
Tm9sf3-201ENSMUST00000025989 Dnah5Q8VHE6 4621 aa8.9□□□□□ -0.98
Tm9sf3-201ENSMUST00000025989 Gm6358A0A087WPH4 74 aa8.89□□□□□ -0.99
Tm9sf3-201ENSMUST00000025989 Stard9Q80TF6 4561 aa8.76□□□□□ -1.01
Tm9sf3-201ENSMUST00000025989 Krtap8-1O08633 61 aa8.75□□□□□ -1.01
Tm9sf3-201ENSMUST00000025989 PlecQ9QXS1 4691 aaKnown RBP8.74□□□□□ -1.01
Tm9sf3-201ENSMUST00000025989 CubnQ9JLB4 3623 aa8.74□□□□□ -1.01
Tm9sf3-201ENSMUST00000025989 Krtap1-5A2A590 122 aa8.74□□□□□ -1.01
Tm9sf3-201ENSMUST00000025989 Gm19402J3QJV4 266 aa8.74□□□□□ -1.01
Tm9sf3-201ENSMUST00000025989 Sprr2kO70562 68 aa8.72□□□□□ -1.01
Tm9sf3-201ENSMUST00000025989 Krtap19-9aF8WH65 55 aa8.71□□□□□ -1.02
Tm9sf3-201ENSMUST00000025989 Vps13dB1ART2 4390 aa8.68□□□□□ -1.02
Tm9sf3-201ENSMUST00000025989 Krtap1-4Q3V2D6 188 aa8.58□□□□□ -1.04
Tm9sf3-201ENSMUST00000025989 Csmd3Q80T79 3707 aa8.52□□□□□ -1.05
Tm9sf3-201ENSMUST00000025989 Sprr2a3Q4KL71 83 aa8.51□□□□□ -1.05
Tm9sf3-201ENSMUST00000025989 Sprr2a1Q9CQK8 83 aa8.51□□□□□ -1.05
Tm9sf3-201ENSMUST00000025989 Krtap7-1Q9D3I6 87 aa8.48□□□□□ -1.05
Tm9sf3-201ENSMUST00000025989 Lce1mQ9CR91 182 aa8.43□□□□□ -1.06
Tm9sf3-201ENSMUST00000025989 Dnah17Q69Z23 4481 aa8.4□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 95.1 ms