RNA–Protein interactions for RNA: ENSMUST00000022369.8

Vcl-201, Transcript of Vinculin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcl, Length 5,267 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcl-201ENSMUST00000022369 Wdfy4E9Q2M9 3149 aa6.94□□□□□ -1.3
Vcl-201ENSMUST00000022369 Gm21887J3QQ04 176 aa6.93□□□□□ -1.3
Vcl-201ENSMUST00000022369 Ndufaf8A2AMZ4 74 aa6.93□□□□□ -1.3
Vcl-201ENSMUST00000022369 FlncQ8VHX6 2726 aaKnown RBP6.92□□□□□ -1.3
Vcl-201ENSMUST00000022369 Celsr3Q91ZI0 3301 aa6.91□□□□□ -1.3
Vcl-201ENSMUST00000022369 Dmxl2Q8BPN8 3032 aa6.91□□□□□ -1.3
Vcl-201ENSMUST00000022369 FryE9Q8I9 3020 aa6.89□□□□□ -1.31
Vcl-201ENSMUST00000022369 Gm5965D3Z724 196 aa6.88□□□□□ -1.31
Vcl-201ENSMUST00000022369 Celsr2Q9R0M0 2920 aa6.88□□□□□ -1.31
Vcl-201ENSMUST00000022369 Lama1P19137 3084 aa6.86□□□□□ -1.31
Vcl-201ENSMUST00000022369 Tenm4Q3UHK6 2771 aa6.85□□□□□ -1.31
Vcl-201ENSMUST00000022369 DspE9Q557 2883 aaKnown RBP6.84□□□□□ -1.31
Vcl-201ENSMUST00000022369 Pdzd2E9Q1M1 2796 aa6.83□□□□□ -1.32
Vcl-201ENSMUST00000022369 Gm40193A0A1B0GT39 78 aa6.82□□□□□ -1.32
Vcl-201ENSMUST00000022369 Gm20537G3UYK7 97 aa6.81□□□□□ -1.32
Vcl-201ENSMUST00000022369 Chd9Q8BYH8 2885 aa6.77□□□□□ -1.33
Vcl-201ENSMUST00000022369 Tenm3Q9WTS6 2715 aa6.77□□□□□ -1.33
Vcl-201ENSMUST00000022369 Tnp1P10856 55 aa6.77□□□□□ -1.33
Vcl-201ENSMUST00000022369 A930033H14RikG5E8X6 103 aa6.76□□□□□ -1.33
Vcl-201ENSMUST00000022369 Dchs2A0A0A6YW72 3346 aa6.73□□□□□ -1.33
Vcl-201ENSMUST00000022369 2310057N15RikQ9D6T8 200 aa6.73□□□□□ -1.33
Vcl-201ENSMUST00000022369 Trank1Q8BV79 2999 aa6.73□□□□□ -1.33
Vcl-201ENSMUST00000022369 Brca2P97929 3329 aa6.72□□□□□ -1.33
Vcl-201ENSMUST00000022369 2310079G19RikQ9D6L6 185 aa6.7□□□□□ -1.34
Vcl-201ENSMUST00000022369 Nf1Q04690 2841 aa6.69□□□□□ -1.34
Vcl-201ENSMUST00000022369 Gm9112A2AI92 75 aa6.69□□□□□ -1.34
Vcl-201ENSMUST00000022369 B930094E09RikQ8C4T2 136 aa6.66□□□□□ -1.34
Vcl-201ENSMUST00000022369 LrbaQ9ESE1 2856 aa6.59□□□□□ -1.35
Vcl-201ENSMUST00000022369 Gm17416Q30KP4 66 aa6.58□□□□□ -1.36
Vcl-201ENSMUST00000022369 Tenm1Q9WTS4 2731 aa6.56□□□□□ -1.36
Vcl-201ENSMUST00000022369 Col6a3E9PWQ3 3284 aa6.56□□□□□ -1.36
Vcl-201ENSMUST00000022369 Helz2E9QAM5 2947 aaKnown RBP6.55□□□□□ -1.36
Vcl-201ENSMUST00000022369 Zfhx3Q61329 3726 aa6.49□□□□□ -1.37
Vcl-201ENSMUST00000022369 VcanQ62059 3357 aa6.47□□□□□ -1.37
Vcl-201ENSMUST00000022369 2210017I01RikA0A0A6YVV1 95 aa6.46□□□□□ -1.38
Vcl-201ENSMUST00000022369 Tenm2Q9WTS5 2764 aa6.44□□□□□ -1.38
Vcl-201ENSMUST00000022369 Dchs1E9PVD3 3291 aa6.43□□□□□ -1.38
Vcl-201ENSMUST00000022369 Gm17402F6Z0L5 76 aa6.4□□□□□ -1.39
Vcl-201ENSMUST00000022369 SpegQ62407 3262 aa6.39□□□□□ -1.39
Vcl-201ENSMUST00000022369 Gm9736A0A1W2P7N1 277 aa6.39□□□□□ -1.39
Vcl-201ENSMUST00000022369 RelnQ60841 3461 aa6.36□□□□□ -1.39
Vcl-201ENSMUST00000022369 Megf8P60882 2789 aa6.29□□□□□ -1.4
Vcl-201ENSMUST00000022369 Myo15aQ9QZZ4 3511 aa6.27□□□□□ -1.41
Vcl-201ENSMUST00000022369 Muc5acE9QAQ8 3455 aa6.25□□□□□ -1.41
Vcl-201ENSMUST00000022369 Gm11939A2A592 99 aa6.25□□□□□ -1.41
Vcl-201ENSMUST00000022369 Akap9Q70FJ1 3797 aa6.23□□□□□ -1.41
Vcl-201ENSMUST00000022369 OtogO55225 2910 aa6.2□□□□□ -1.42
Vcl-201ENSMUST00000022369 Vps13cQ8BX70 3748 aa6.19□□□□□ -1.42
Vcl-201ENSMUST00000022369 Wdfy3Q6VNB8 3508 aa6.19□□□□□ -1.42
Vcl-201ENSMUST00000022369 Prm2P07978 107 aa6.18□□□□□ -1.42
Vcl-201ENSMUST00000022369 VwfQ8CIZ8 2813 aa6.14□□□□□ -1.43
Vcl-201ENSMUST00000022369 DmdP11531 3678 aa6.09□□□□□ -1.43
Vcl-201ENSMUST00000022369 Gm19668J3QMD1 248 aa6.09□□□□□ -1.43
Vcl-201ENSMUST00000022369 Gm9918Q8BUR5 174 aa6.09□□□□□ -1.44
Vcl-201ENSMUST00000022369 Krtap19-5O08632 62 aa6.08□□□□□ -1.44
Vcl-201ENSMUST00000022369 Krtap3-2Q9D638 99 aa6.08□□□□□ -1.44
Vcl-201ENSMUST00000022369 Krtap3-3Q9D7P0 99 aa6.08□□□□□ -1.44
Vcl-201ENSMUST00000022369 Krtap13-1Q8K198 168 aa6.08□□□□□ -1.44
Vcl-201ENSMUST00000022369 Fbn1Q61554 2873 aaKnown RBP6□□□□□ -1.45
Vcl-201ENSMUST00000022369 Krtap3-1A2A591 98 aa6□□□□□ -1.45
Vcl-201ENSMUST00000022369 Gm10318A0A1W2P728 225 aa5.99□□□□□ -1.45
Vcl-201ENSMUST00000022369 Csmd1Q923L3 3564 aa5.99□□□□□ -1.45
Vcl-201ENSMUST00000022369 4933428G20RikQ9D3X4 101 aa5.94□□□□□ -1.46
Vcl-201ENSMUST00000022369 Crct1Q6PAI5 102 aa5.89□□□□□ -1.47
Vcl-201ENSMUST00000022369 Smg1Q8BKX6 3658 aaKnown RBP5.89□□□□□ -1.47
Vcl-201ENSMUST00000022369 Lama5Q61001 3718 aa5.83□□□□□ -1.48
Vcl-201ENSMUST00000022369 Col7a1Q63870 2944 aa5.81□□□□□ -1.48
Vcl-201ENSMUST00000022369 SpenQ62504 3644 aaKnown RBP5.77□□□□□ -1.49
Vcl-201ENSMUST00000022369 Zfhx4Q9JJN2 3550 aa5.74□□□□□ -1.49
Vcl-201ENSMUST00000022369 Ank2Q8C8R3 3898 aa5.71□□□□□ -1.5
Vcl-201ENSMUST00000022369 Muc6Q80T03 2850 aa5.69□□□□□ -1.5
Vcl-201ENSMUST00000022369 Krtap1-5A2A590 122 aa5.6□□□□□ -1.51
Vcl-201ENSMUST00000022369 Gm884A2A9H6 3643 aa5.59□□□□□ -1.51
Vcl-201ENSMUST00000022369 Sprr2a3Q4KL71 83 aa5.59□□□□□ -1.51
Vcl-201ENSMUST00000022369 Sprr2a1Q9CQK8 83 aa5.59□□□□□ -1.51
Vcl-201ENSMUST00000022369 Cmya5Q70KF4 3739 aa5.54□□□□□ -1.52
Vcl-201ENSMUST00000022369 Muc4Q8JZM8 3443 aa5.5□□□□□ -1.53
Vcl-201ENSMUST00000022369 Svep1A2AVA0 3567 aa5.5□□□□□ -1.53
Vcl-201ENSMUST00000022369 Dnah14A0A140LIJ4 4489 aa5.5□□□□□ -1.53
Vcl-201ENSMUST00000022369 Krtap7-1Q9D3I6 87 aa5.49□□□□□ -1.53
Vcl-201ENSMUST00000022369 Krtap19-9aF8WH65 55 aa5.47□□□□□ -1.53
Vcl-201ENSMUST00000022369 Huwe1Q7TMY8 4377 aaKnown RBP5.42□□□□□ -1.54
Vcl-201ENSMUST00000022369 Dnah5Q8VHE6 4621 aa5.42□□□□□ -1.54
Vcl-201ENSMUST00000022369 Gm6358A0A087WPH4 74 aa5.42□□□□□ -1.54
Vcl-201ENSMUST00000022369 Krtap1-4Q3V2D6 188 aa5.42□□□□□ -1.54
Vcl-201ENSMUST00000022369 Dnah10D3YYQ8 4591 aa5.41□□□□□ -1.54
Vcl-201ENSMUST00000022369 Stard9Q80TF6 4561 aa5.37□□□□□ -1.55
Vcl-201ENSMUST00000022369 Csmd2V9GX34 3611 aa5.35□□□□□ -1.55
Vcl-201ENSMUST00000022369 Krtap19-9bQ99NG9 58 aa5.33□□□□□ -1.56
Vcl-201ENSMUST00000022369 Krtap8-1O08633 61 aa5.31□□□□□ -1.56
Vcl-201ENSMUST00000022369 Vps13dB1ART2 4390 aa5.3□□□□□ -1.56
Vcl-201ENSMUST00000022369 LystP97412 3788 aa5.3□□□□□ -1.56
Vcl-201ENSMUST00000022369 Gm19402J3QJV4 266 aa5.27□□□□□ -1.57
Vcl-201ENSMUST00000022369 LorP18165 486 aa5.27□□□□□ -1.57
Vcl-201ENSMUST00000022369 PlecQ9QXS1 4691 aaKnown RBP5.27□□□□□ -1.57
Vcl-201ENSMUST00000022369 Krtap12-1Q9Z287 130 aa5.24□□□□□ -1.57
Vcl-201ENSMUST00000022369 Dnah17Q69Z23 4481 aa5.21□□□□□ -1.58
Vcl-201ENSMUST00000022369 Gm18596A0A1W2P860 280 aa5.18□□□□□ -1.58
Vcl-201ENSMUST00000022369 CubnQ9JLB4 3623 aa5.05□□□□□ -1.6
Vcl-201ENSMUST00000022369 Sprr2kO70562 68 aa5.04□□□□□ -1.6
Retrieved 100 of 22,080 RNA–protein pairs in 36.9 ms