RNA–Protein interactions for RNA: ENSMUST00000176172.7

Cux1-206, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cux1, Length 4,882 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-206ENSMUST00000176172 Fam229bQ8CF36 80 aa10.62□□□□□ -0.71
Cux1-206ENSMUST00000176172 Smim29Q8R043 75 aa10.62□□□□□ -0.71
Cux1-206ENSMUST00000176172 Gm3238W4VSP7 230 aa10.62□□□□□ -0.71
Cux1-206ENSMUST00000176172 NbdyA0A0N4SUI7 68 aa10.61□□□□□ -0.71
Cux1-206ENSMUST00000176172 Tep1P97499 2629 aa10.59□□□□□ -0.71
Cux1-206ENSMUST00000176172 9530053A07RikE9PVG8 2581 aa10.59□□□□□ -0.71
Cux1-206ENSMUST00000176172 2310034C09RikQ9D746 214 aa10.58□□□□□ -0.72
Cux1-206ENSMUST00000176172 Gm7173A0A0G2JEB6 3132 aa10.57□□□□□ -0.72
Cux1-206ENSMUST00000176172 Gm21798J3QNU5 87 aa10.54□□□□□ -0.72
Cux1-206ENSMUST00000176172 Usp34Q6ZQ93 3582 aa10.52□□□□□ -0.72
Cux1-206ENSMUST00000176172 Gm10320E9PW43 113 aa10.52□□□□□ -0.73
Cux1-206ENSMUST00000176172 Pkd1l1Q8R526 2615 aa10.52□□□□□ -0.73
Cux1-206ENSMUST00000176172 Fbn2Q61555 2907 aa10.51□□□□□ -0.73
Cux1-206ENSMUST00000176172 Ash1lQ99MY8 2958 aa10.51□□□□□ -0.73
Cux1-206ENSMUST00000176172 Chd7A2AJK6 2986 aaKnown RBP10.51□□□□□ -0.73
Cux1-206ENSMUST00000176172 Gm7137J3QMW1 236 aa10.51□□□□□ -0.73
Cux1-206ENSMUST00000176172 Stab2Q8R4U0 2559 aa10.5□□□□□ -0.73
Cux1-206ENSMUST00000176172 Col6a5A6H584 2640 aa10.48□□□□□ -0.73
Cux1-206ENSMUST00000176172 Dmxl1Q6PNC0 3013 aa10.46□□□□□ -0.73
Cux1-206ENSMUST00000176172 MgaA2AWL7 3003 aaKnown RBP10.46□□□□□ -0.74
Cux1-206ENSMUST00000176172 Mki67E9PVX6 3177 aaKnown RBP10.42□□□□□ -0.74
Cux1-206ENSMUST00000176172 Gm9821Q8K076 103 aa10.4□□□□□ -0.74
Cux1-206ENSMUST00000176172 Nbeal2Q6ZQA0 2742 aa10.4□□□□□ -0.75
Cux1-206ENSMUST00000176172 6030445D17RikE9Q8F9 148 aa10.38□□□□□ -0.75
Cux1-206ENSMUST00000176172 Sprr1aQ62266 144 aa10.38□□□□□ -0.75
Cux1-206ENSMUST00000176172 Gm10139O88245 57 aa10.38□□□□□ -0.75
Cux1-206ENSMUST00000176172 Odf3bQ5M8M2 238 aa10.36□□□□□ -0.75
Cux1-206ENSMUST00000176172 Muc2Q80Z19 2680 aa10.35□□□□□ -0.75
Cux1-206ENSMUST00000176172 KalrnA2CG49 2964 aa10.34□□□□□ -0.75
Cux1-206ENSMUST00000176172 Col12a1Q60847 3120 aa10.34□□□□□ -0.75
Cux1-206ENSMUST00000176172 Gm20538F6Z9R1 75 aa10.31□□□□□ -0.76
Cux1-206ENSMUST00000176172 CriptO70333 101 aa10.29□□□□□ -0.76
Cux1-206ENSMUST00000176172 Bod1lE9Q6J5 3032 aa10.28□□□□□ -0.76
Cux1-206ENSMUST00000176172 Gm9955Q8CEJ8 102 aa10.28□□□□□ -0.76
Cux1-206ENSMUST00000176172 Hivep1Q03172 2688 aa10.27□□□□□ -0.77
Cux1-206ENSMUST00000176172 Gm4491E0CX42 125 aa10.26□□□□□ -0.77
Cux1-206ENSMUST00000176172 Gm17349F7BGH6 99 aa10.26□□□□□ -0.77
Cux1-206ENSMUST00000176172 HttP42859 3119 aa10.25□□□□□ -0.77
Cux1-206ENSMUST00000176172 Cystm1Q8K353 104 aa10.25□□□□□ -0.77
Cux1-206ENSMUST00000176172 Tex15F8VPN2 2785 aa10.24□□□□□ -0.77
Cux1-206ENSMUST00000176172 A730071L15RikQ8C4X0 137 aa10.23□□□□□ -0.77
Cux1-206ENSMUST00000176172 Gm16253D3Z167 63 aa10.23□□□□□ -0.77
Cux1-206ENSMUST00000176172 Cfap54Q8C6S9 3106 aa10.2□□□□□ -0.78
Cux1-206ENSMUST00000176172 Gm36176A0A1W2P8D5 158 aa10.17□□□□□ -0.78
Cux1-206ENSMUST00000176172 Gm3880A0A1B0GSB3 72 aa10.17□□□□□ -0.78
Cux1-206ENSMUST00000176172 Gm9508A0A1W2P7W0 230 aa10.16□□□□□ -0.78
Cux1-206ENSMUST00000176172 Pla2g10Q9QXX3 151 aa10.16□□□□□ -0.78
Cux1-206ENSMUST00000176172 Rev3lQ61493 3122 aa10.15□□□□□ -0.78
Cux1-206ENSMUST00000176172 Spink7Q6IE32 76 aa10.13□□□□□ -0.79
Cux1-206ENSMUST00000176172 Cdh23Q99PF4 3354 aa10.11□□□□□ -0.79
Cux1-206ENSMUST00000176172 Gm37013Q8K491 104 aa10.08□□□□□ -0.8
Cux1-206ENSMUST00000176172 Krtap15-1Q9QZU5 150 aa10.07□□□□□ -0.8
Cux1-206ENSMUST00000176172 FcgbpE9Q0B5 2583 aa10.04□□□□□ -0.8
Cux1-206ENSMUST00000176172 Krtap29-1A2A5X4 342 aa10.03□□□□□ -0.8
Cux1-206ENSMUST00000176172 Ranbp2Q9ERU9 3053 aaKnown RBP10.02□□□□□ -0.81
Cux1-206ENSMUST00000176172 AspmQ8CJ27 3122 aa10.01□□□□□ -0.81
Cux1-206ENSMUST00000176172 Unc80Q8BLN6 3261 aa9.98□□□□□ -0.81
Cux1-206ENSMUST00000176172 Itpr2Q9Z329 2701 aa9.96□□□□□ -0.81
Cux1-206ENSMUST00000176172 Fam229aB2KGE5 128 aa9.96□□□□□ -0.82
Cux1-206ENSMUST00000176172 Vps13aQ5H8C4 3166 aa9.94□□□□□ -0.82
Cux1-206ENSMUST00000176172 Celsr1O35161 3034 aa9.93□□□□□ -0.82
Cux1-206ENSMUST00000176172 Sec61bQ9CQS8 96 aaKnown RBP9.91□□□□□ -0.82
Cux1-206ENSMUST00000176172 AtmQ62388 3066 aa9.91□□□□□ -0.82
Cux1-206ENSMUST00000176172 Szt2A2A9C3 3431 aa9.9□□□□□ -0.82
Cux1-206ENSMUST00000176172 Gm5767A0A0J9YTU8 78 aa9.9□□□□□ -0.82
Cux1-206ENSMUST00000176172 Gm3646F6S692 53 aa9.88□□□□□ -0.83
Cux1-206ENSMUST00000176172 Krtap13O88375 197 aa9.88□□□□□ -0.83
Cux1-206ENSMUST00000176172 2310050C09RikG5E8Z3 280 aa9.88□□□□□ -0.83
Cux1-206ENSMUST00000176172 Frem2Q6NVD0 3160 aa9.81□□□□□ -0.84
Cux1-206ENSMUST00000176172 Rpl37Q9D823 97 aa9.81□□□□□ -0.84
Cux1-206ENSMUST00000176172 2310061N02RikQ9D6S9 174 aa9.8□□□□□ -0.84
Cux1-206ENSMUST00000176172 Camk2n1Q6QWF9 78 aa9.79□□□□□ -0.84
Cux1-206ENSMUST00000176172 Igfn1Q3KNY0 2849 aa9.79□□□□□ -0.84
Cux1-206ENSMUST00000176172 Utp20Q5XG71 2788 aaKnown RBP9.78□□□□□ -0.84
Cux1-206ENSMUST00000176172 FrylF8VQ05 3007 aa9.74□□□□□ -0.85
Cux1-206ENSMUST00000176172 Krtap14O08640 167 aa9.74□□□□□ -0.85
Cux1-206ENSMUST00000176172 TgO08710 2766 aa9.74□□□□□ -0.85
Cux1-206ENSMUST00000176172 BC029722A0A0N4SW31 51 aa9.73□□□□□ -0.85
Cux1-206ENSMUST00000176172 Gm9507D3Z5T3 223 aa9.72□□□□□ -0.85
Cux1-206ENSMUST00000176172 FlncQ8VHX6 2726 aaKnown RBP9.72□□□□□ -0.85
Cux1-206ENSMUST00000176172 Gm2310J3QNJ2 377 aa9.7□□□□□ -0.86
Cux1-206ENSMUST00000176172 Srrm2Q8BTI8 2703 aaKnown RBP9.7□□□□□ -0.86
Cux1-206ENSMUST00000176172 NbeaQ9EPN1 2936 aa9.69□□□□□ -0.86
Cux1-206ENSMUST00000176172 Lrrc37aB1AWG4 3215 aa9.69□□□□□ -0.86
Cux1-206ENSMUST00000176172 Romo1P60603 79 aa9.66□□□□□ -0.86
Cux1-206ENSMUST00000176172 Rps29P62274 56 aa9.66□□□□□ -0.86
Cux1-206ENSMUST00000176172 DspE9Q557 2883 aaKnown RBP9.65□□□□□ -0.86
Cux1-206ENSMUST00000176172 4933415A04RikQ9D443 101 aa9.65□□□□□ -0.86
Cux1-206ENSMUST00000176172 BptfA2A654 3036 aaKnown RBP9.63□□□□□ -0.87
Cux1-206ENSMUST00000176172 Zzef1Q5SSH7 2924 aa9.63□□□□□ -0.87
Cux1-206ENSMUST00000176172 FryE9Q8I9 3020 aa9.62□□□□□ -0.87
Cux1-206ENSMUST00000176172 Gm19426M0QWC7 77 aa9.62□□□□□ -0.87
Cux1-206ENSMUST00000176172 Tnp2P11378 117 aa9.62□□□□□ -0.87
Cux1-206ENSMUST00000176172 Celsr2Q9R0M0 2920 aa9.6□□□□□ -0.87
Cux1-206ENSMUST00000176172 Adgrg4B7ZCC9 3073 aa9.6□□□□□ -0.87
Cux1-206ENSMUST00000176172 Dmxl2Q8BPN8 3032 aa9.59□□□□□ -0.87
Cux1-206ENSMUST00000176172 ApcQ61315 2845 aa9.58□□□□□ -0.88
Cux1-206ENSMUST00000176172 Krtap10-4Q08EG8 221 aa9.58□□□□□ -0.88
Cux1-206ENSMUST00000176172 Wdfy4E9Q2M9 3149 aa9.58□□□□□ -0.88
Cux1-206ENSMUST00000176172 Tenm4Q3UHK6 2771 aa9.57□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 8.8 ms