RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Atox1O08997 68 aaKnown RBP4.05□□□□□ -1.76
Lig4-202ENSMUST00000170033 NipblQ6KCD5 2798 aaKnown RBP4.05□□□□□ -1.76
Lig4-202ENSMUST00000170033 Col7a1Q63870 2944 aa4.04□□□□□ -1.76
Lig4-202ENSMUST00000170033 Igkv8-28A0A0G2JE47 121 aa4.04□□□□□ -1.76
Lig4-202ENSMUST00000170033 Epg5Q80TA9 2572 aa4.03□□□□□ -1.76
Lig4-202ENSMUST00000170033 P84750 121 aa4.03□□□□□ -1.76
Lig4-202ENSMUST00000170033 Igfn1Q3KNY0 2849 aa4.03□□□□□ -1.76
Lig4-202ENSMUST00000170033 Hivep3A2A884 2348 aa4.03□□□□□ -1.76
Lig4-202ENSMUST00000170033 U90926O08546 118 aa4.03□□□□□ -1.76
Lig4-202ENSMUST00000170033 Cox6a2P43023 97 aa4.03□□□□□ -1.76
Lig4-202ENSMUST00000170033 Chchd10Q7TNL9 138 aa4.03□□□□□ -1.76
Lig4-202ENSMUST00000170033 CicQ924A2 2510 aa4.02□□□□□ -1.77
Lig4-202ENSMUST00000170033 Akap13E9Q394 2776 aa4.02□□□□□ -1.77
Lig4-202ENSMUST00000170033 Coa5Q99M07 74 aa4.02□□□□□ -1.77
Lig4-202ENSMUST00000170033 Nf1Q04690 2841 aa4.01□□□□□ -1.77
Lig4-202ENSMUST00000170033 Q8K1L6 76 aa4.01□□□□□ -1.77
Lig4-202ENSMUST00000170033 Xirp2Q4U4S6 3784 aa4.01□□□□□ -1.77
Lig4-202ENSMUST00000170033 Usp9yF8VPU6 2556 aa4□□□□□ -1.77
Lig4-202ENSMUST00000170033 SptssbQ925E8 76 aa4□□□□□ -1.77
Lig4-202ENSMUST00000170033 Zfp462B1AWL2 2495 aaKnown RBP4□□□□□ -1.77
Lig4-202ENSMUST00000170033 Igkv1-88A0A140T8N1 120 aa4□□□□□ -1.77
Lig4-202ENSMUST00000170033 Prr15lQ8JZM2 100 aa4□□□□□ -1.77
Lig4-202ENSMUST00000170033 Krtap15-1Q9QZU5 150 aa4□□□□□ -1.77
Lig4-202ENSMUST00000170033 Prh1P05142 261 aa3.99□□□□□ -1.77
Lig4-202ENSMUST00000170033 A330070K13RikQ8CA53 115 aa3.99□□□□□ -1.77
Lig4-202ENSMUST00000170033 Kmt2aP55200 3966 aa3.99□□□□□ -1.77
Lig4-202ENSMUST00000170033 Zcchc13Q9D548 170 aa3.99□□□□□ -1.77
Lig4-202ENSMUST00000170033 Dnah3Q8BW94 4083 aa3.98□□□□□ -1.77
Lig4-202ENSMUST00000170033 Myo18bE9PV66 2605 aa3.98□□□□□ -1.77
Lig4-202ENSMUST00000170033 Vpreb3D3Z6J4 130 aa3.97□□□□□ -1.77
Lig4-202ENSMUST00000170033 B9d2Q3UK10 175 aa3.97□□□□□ -1.77
Lig4-202ENSMUST00000170033 Coa6Q8BGD8 79 aa3.97□□□□□ -1.77
Lig4-202ENSMUST00000170033 Bahcc1Q3UHR0 2643 aa3.97□□□□□ -1.77
Lig4-202ENSMUST00000170033 Rpl37aP61514 92 aa3.96□□□□□ -1.78
Lig4-202ENSMUST00000170033 Phxr4P15974 95 aa3.96□□□□□ -1.78
Lig4-202ENSMUST00000170033 TrrapQ80YV3 2565 aaKnown RBP3.96□□□□□ -1.78
Lig4-202ENSMUST00000170033 6030445D17RikE9Q8F9 148 aa3.95□□□□□ -1.78
Lig4-202ENSMUST00000170033 Romo1P60603 79 aa3.95□□□□□ -1.78
Lig4-202ENSMUST00000170033 Mrpl34Q99N91 92 aa3.95□□□□□ -1.78
Lig4-202ENSMUST00000170033 TgO08710 2766 aa3.95□□□□□ -1.78
Lig4-202ENSMUST00000170033 CubnQ9JLB4 3623 aa3.95□□□□□ -1.78
Lig4-202ENSMUST00000170033 Igkv1-122A0A140T8M9 119 aa3.95□□□□□ -1.78
Lig4-202ENSMUST00000170033 Cypt15B1AXS0 87 aa3.95□□□□□ -1.78
Lig4-202ENSMUST00000170033 Gm10139O88245 57 aa3.95□□□□□ -1.78
Lig4-202ENSMUST00000170033 Defb37Q7TMD2 62 aa3.95□□□□□ -1.78
Lig4-202ENSMUST00000170033 MtorQ9JLN9 2549 aa3.95□□□□□ -1.78
Lig4-202ENSMUST00000170033 Gm44790A0A0N4SV91 103 aa3.94□□□□□ -1.78
Lig4-202ENSMUST00000170033 Ndufaf8A2AMZ4 74 aa3.94□□□□□ -1.78
Lig4-202ENSMUST00000170033 Igkv8-19A0A0G2JFN8 121 aa3.93□□□□□ -1.78
Lig4-202ENSMUST00000170033 Wfdc13Q5DQQ6 81 aa3.93□□□□□ -1.78
Lig4-202ENSMUST00000170033 Smim29Q8R043 75 aa3.93□□□□□ -1.78
Lig4-202ENSMUST00000170033 Igkv3-2A0A075B5P0 119 aa3.92□□□□□ -1.78
Lig4-202ENSMUST00000170033 Wfdc10Q3V2J9 124 aa3.92□□□□□ -1.78
Lig4-202ENSMUST00000170033 C130032M10RikQ8C888 123 aa3.92□□□□□ -1.78
Lig4-202ENSMUST00000170033 Setd2E9Q5F9 2537 aa3.92□□□□□ -1.78
Lig4-202ENSMUST00000170033 PscaP57096 123 aa3.92□□□□□ -1.78
Lig4-202ENSMUST00000170033 Notch2O35516 2470 aa3.92□□□□□ -1.78
Lig4-202ENSMUST00000170033 Dnah17Q69Z23 4481 aa3.92□□□□□ -1.78
Lig4-202ENSMUST00000170033 SycnQ8VCK7 134 aa3.91□□□□□ -1.78
Lig4-202ENSMUST00000170033 Nbeal2Q6ZQA0 2742 aa3.91□□□□□ -1.78
Lig4-202ENSMUST00000170033 Wfdc17Q5SSJ1 76 aa3.9□□□□□ -1.78
Lig4-202ENSMUST00000170033 Brwd1Q921C3 2304 aa3.9□□□□□ -1.78
Lig4-202ENSMUST00000170033 PolqQ8CGS6 2544 aa3.9□□□□□ -1.78
Lig4-202ENSMUST00000170033 Gm3250E9Q1M3 230 aa3.9□□□□□ -1.79
Lig4-202ENSMUST00000170033 Gm10065F6TJM2 114 aa3.9□□□□□ -1.79
Lig4-202ENSMUST00000170033 2310061N02RikQ9D6S9 174 aa3.9□□□□□ -1.79
Lig4-202ENSMUST00000170033 Gm4707V9GXN5 68 aa3.9□□□□□ -1.79
Lig4-202ENSMUST00000170033 Itpr2Q9Z329 2701 aa3.9□□□□□ -1.79
Lig4-202ENSMUST00000170033 Igkv3-5A0A140T8M6 119 aa3.9□□□□□ -1.79
Lig4-202ENSMUST00000170033 Gm3233E9Q2H5 230 aa3.89□□□□□ -1.79
Lig4-202ENSMUST00000170033 Q8BGJ3 129 aa3.89□□□□□ -1.79
Lig4-202ENSMUST00000170033 Defb40Q70KL2 73 aa3.88□□□□□ -1.79
Lig4-202ENSMUST00000170033 Fam168bQ80XQ8 194 aa3.88□□□□□ -1.79
Lig4-202ENSMUST00000170033 Dnah1E9Q8T7 4250 aa3.88□□□□□ -1.79
Lig4-202ENSMUST00000170033 Gm27235Q3UW50 83 aa3.87□□□□□ -1.79
Lig4-202ENSMUST00000170033 A0A286YE49 62 aa3.87□□□□□ -1.79
Lig4-202ENSMUST00000170033 Gm9112A2AI92 75 aa3.87□□□□□ -1.79
Lig4-202ENSMUST00000170033 Gm21886J3QJU9 214 aa3.86□□□□□ -1.79
Lig4-202ENSMUST00000170033 Odf3bQ5M8M2 238 aa3.86□□□□□ -1.79
Lig4-202ENSMUST00000170033 Gm28230A0A0A0MQ91 144 aa3.86□□□□□ -1.79
Lig4-202ENSMUST00000170033 Gm2310J3QNJ2 377 aa3.86□□□□□ -1.79
Lig4-202ENSMUST00000170033 Tenm4Q3UHK6 2771 aa3.85□□□□□ -1.79
Lig4-202ENSMUST00000170033 Fbn1Q61554 2873 aaKnown RBP3.85□□□□□ -1.79
Lig4-202ENSMUST00000170033 Defb38Q7TNV7 63 aa3.85□□□□□ -1.79
Lig4-202ENSMUST00000170033 1700018G05RikA0A1B0GSI2 66 aa3.84□□□□□ -1.79
Lig4-202ENSMUST00000170033 Dync2h1Q45VK7 4306 aa3.83□□□□□ -1.8
Lig4-202ENSMUST00000170033 Krtap29-1A2A5X4 342 aa3.83□□□□□ -1.8
Lig4-202ENSMUST00000170033 Tex15F8VPN2 2785 aa3.82□□□□□ -1.8
Lig4-202ENSMUST00000170033 FlnbQ80X90 2602 aaKnown RBP3.82□□□□□ -1.8
Lig4-202ENSMUST00000170033 Tenm1Q9WTS4 2731 aa3.82□□□□□ -1.8
Lig4-202ENSMUST00000170033 2310057N15RikQ9D6T8 200 aa3.81□□□□□ -1.8
Lig4-202ENSMUST00000170033 Plac8Q9JI48 112 aa3.81□□□□□ -1.8
Lig4-202ENSMUST00000170033 2210017I01RikA0A0A6YVV1 95 aa3.81□□□□□ -1.8
Lig4-202ENSMUST00000170033 PtprqP0C5E4 2300 aa3.8□□□□□ -1.8
Lig4-202ENSMUST00000170033 Gm20661K7N787 53 aa3.8□□□□□ -1.8
Lig4-202ENSMUST00000170033 Fn1P11276 2477 aaKnown RBP3.79□□□□□ -1.8
Lig4-202ENSMUST00000170033 NbdyA0A0N4SUI7 68 aa3.79□□□□□ -1.8
Lig4-202ENSMUST00000170033 Gm7138L7N2C3 230 aa3.79□□□□□ -1.8
Lig4-202ENSMUST00000170033 Gm3238W4VSP7 230 aa3.79□□□□□ -1.8
Lig4-202ENSMUST00000170033 ApcQ61315 2845 aa3.78□□□□□ -1.8
Retrieved 100 of 22,080 RNA–protein pairs in 68 ms