RNA–Protein interactions for RNA: ENSMUST00000165860.7

Ubr4-212, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

TSL 5 BASIC

Gene Ubr4, Length 15,798 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-212ENSMUST00000165860 UtrnE9Q6R7 3430 aa3.94□□□□□ -1.78
Ubr4-212ENSMUST00000165860 Myo15bI7HPW8 3033 aa3.94□□□□□ -1.78
Ubr4-212ENSMUST00000165860 Ubr5Q80TP3 2792 aa3.93□□□□□ -1.78
Ubr4-212ENSMUST00000165860 Gm9955Q8CEJ8 102 aa3.93□□□□□ -1.78
Ubr4-212ENSMUST00000165860 Gm3880A0A1B0GSB3 72 aa3.92□□□□□ -1.78
Ubr4-212ENSMUST00000165860 Zcchc13Q9D548 170 aa3.92□□□□□ -1.78
Ubr4-212ENSMUST00000165860 Col4a4Q9QZR9 1682 aa3.91□□□□□ -1.78
Ubr4-212ENSMUST00000165860 Jbts17Q8CE72 3214 aa3.91□□□□□ -1.78
Ubr4-212ENSMUST00000165860 Ndufaf8A2AMZ4 74 aa3.91□□□□□ -1.78
Ubr4-212ENSMUST00000165860 Fbn2Q61555 2907 aa3.91□□□□□ -1.78
Ubr4-212ENSMUST00000165860 Lama2Q60675 3118 aaKnown RBP3.9□□□□□ -1.78
Ubr4-212ENSMUST00000165860 Cfap54Q8C6S9 3106 aa3.9□□□□□ -1.79
Ubr4-212ENSMUST00000165860 Cep350E9Q309 3095 aa3.9□□□□□ -1.79
Ubr4-212ENSMUST00000165860 Muc2Q80Z19 2680 aa3.9□□□□□ -1.79
Ubr4-212ENSMUST00000165860 Fam104aA2A6P4 185 aa3.89□□□□□ -1.79
Ubr4-212ENSMUST00000165860 Spink7Q6IE32 76 aa3.89□□□□□ -1.79
Ubr4-212ENSMUST00000165860 Itpr2Q9Z329 2701 aa3.88□□□□□ -1.79
Ubr4-212ENSMUST00000165860 Cox6b2Q80ZN9 88 aa3.87□□□□□ -1.79
Ubr4-212ENSMUST00000165860 Prune2Q52KR3 3084 aa3.87□□□□□ -1.79
Ubr4-212ENSMUST00000165860 Tex15F8VPN2 2785 aa3.87□□□□□ -1.79
Ubr4-212ENSMUST00000165860 Gm9112A2AI92 75 aa3.86□□□□□ -1.79
Ubr4-212ENSMUST00000165860 TrioQ0KL02 3102 aa3.86□□□□□ -1.79
Ubr4-212ENSMUST00000165860 Anapc11Q9CPX9 84 aa3.86□□□□□ -1.79
Ubr4-212ENSMUST00000165860 FlncQ8VHX6 2726 aaKnown RBP3.85□□□□□ -1.79
Ubr4-212ENSMUST00000165860 Nbeal2Q6ZQA0 2742 aa3.85□□□□□ -1.79
Ubr4-212ENSMUST00000165860 Gm40193A0A1B0GT39 78 aa3.84□□□□□ -1.79
Ubr4-212ENSMUST00000165860 OxtP35454 125 aa3.84□□□□□ -1.79
Ubr4-212ENSMUST00000165860 Frem2Q6NVD0 3160 aa3.83□□□□□ -1.8
Ubr4-212ENSMUST00000165860 6030445D17RikE9Q8F9 148 aa3.83□□□□□ -1.8
Ubr4-212ENSMUST00000165860 Gm3285A0A1W2P7U0 201 aa3.82□□□□□ -1.8
Ubr4-212ENSMUST00000165860 Dnah12Q3V0Q1 3086 aa3.82□□□□□ -1.8
Ubr4-212ENSMUST00000165860 KalrnA2CG49 2964 aa3.81□□□□□ -1.8
Ubr4-212ENSMUST00000165860 Ash1lQ99MY8 2958 aa3.81□□□□□ -1.8
Ubr4-212ENSMUST00000165860 Fam229aB2KGE5 128 aa3.8□□□□□ -1.8
Ubr4-212ENSMUST00000165860 Chd7A2AJK6 2986 aaKnown RBP3.8□□□□□ -1.8
Ubr4-212ENSMUST00000165860 Plac8Q9JI48 112 aa3.8□□□□□ -1.8
Ubr4-212ENSMUST00000165860 Gm3250E9Q1M3 230 aa3.8□□□□□ -1.8
Ubr4-212ENSMUST00000165860 Krtap24-1G3X9A2 248 aa3.8□□□□□ -1.8
Ubr4-212ENSMUST00000165860 Dmxl1Q6PNC0 3013 aa3.79□□□□□ -1.8
Ubr4-212ENSMUST00000165860 Krtap15-1Q9QZU5 150 aa3.79□□□□□ -1.8
Ubr4-212ENSMUST00000165860 FcgbpE9Q0B5 2583 aa3.79□□□□□ -1.8
Ubr4-212ENSMUST00000165860 Defb9Q8R2I6 67 aa3.79□□□□□ -1.8
Ubr4-212ENSMUST00000165860 Unc80Q8BLN6 3261 aa3.78□□□□□ -1.8
Ubr4-212ENSMUST00000165860 MgaA2AWL7 3003 aaKnown RBP3.78□□□□□ -1.8
Ubr4-212ENSMUST00000165860 Prm2P07978 107 aa3.77□□□□□ -1.81
Ubr4-212ENSMUST00000165860 Bod1lE9Q6J5 3032 aa3.77□□□□□ -1.81
Ubr4-212ENSMUST00000165860 Hivep1Q03172 2688 aa3.77□□□□□ -1.81
Ubr4-212ENSMUST00000165860 Usp34Q6ZQ93 3582 aa3.77□□□□□ -1.81
Ubr4-212ENSMUST00000165860 Rpl37Q9D823 97 aa3.77□□□□□ -1.81
Ubr4-212ENSMUST00000165860 Gm7173A0A0G2JEB6 3132 aa3.76□□□□□ -1.81
Ubr4-212ENSMUST00000165860 AW011738F6S7Q2 159 aa3.76□□□□□ -1.81
Ubr4-212ENSMUST00000165860 Lama3Q61789 3330 aa3.76□□□□□ -1.81
Ubr4-212ENSMUST00000165860 Igfn1Q3KNY0 2849 aa3.75□□□□□ -1.81
Ubr4-212ENSMUST00000165860 Mki67E9PVX6 3177 aaKnown RBP3.75□□□□□ -1.81
Ubr4-212ENSMUST00000165860 FrylF8VQ05 3007 aa3.74□□□□□ -1.81
Ubr4-212ENSMUST00000165860 Gm4491E0CX42 125 aa3.74□□□□□ -1.81
Ubr4-212ENSMUST00000165860 Gm9195A0A140LHT4 2805 aa3.72□□□□□ -1.81
Ubr4-212ENSMUST00000165860 Gm10065F6TJM2 114 aa3.71□□□□□ -1.81
Ubr4-212ENSMUST00000165860 Gm10382Q3V0T5 144 aa3.71□□□□□ -1.81
Ubr4-212ENSMUST00000165860 DspE9Q557 2883 aaKnown RBP3.7□□□□□ -1.82
Ubr4-212ENSMUST00000165860 Gm10139O88245 57 aa3.7□□□□□ -1.82
Ubr4-212ENSMUST00000165860 Ranbp2Q9ERU9 3053 aaKnown RBP3.7□□□□□ -1.82
Ubr4-212ENSMUST00000165860 Gm2310J3QNJ2 377 aa3.69□□□□□ -1.82
Ubr4-212ENSMUST00000165860 Krtap14O08640 167 aa3.68□□□□□ -1.82
Ubr4-212ENSMUST00000165860 Nf1Q04690 2841 aa3.67□□□□□ -1.82
Ubr4-212ENSMUST00000165860 Chd9Q8BYH8 2885 aa3.67□□□□□ -1.82
Ubr4-212ENSMUST00000165860 Sprr1aQ62266 144 aa3.66□□□□□ -1.82
Ubr4-212ENSMUST00000165860 ApcQ61315 2845 aa3.66□□□□□ -1.82
Ubr4-212ENSMUST00000165860 Lelp1Q9DAE3 120 aa3.65□□□□□ -1.83
Ubr4-212ENSMUST00000165860 Krtap13O88375 197 aa3.64□□□□□ -1.83
Ubr4-212ENSMUST00000165860 Vps13aQ5H8C4 3166 aa3.62□□□□□ -1.83
Ubr4-212ENSMUST00000165860 2310057N15RikQ9D6T8 200 aa3.62□□□□□ -1.83
Ubr4-212ENSMUST00000165860 HttP42859 3119 aa3.62□□□□□ -1.83
Ubr4-212ENSMUST00000165860 Zzef1Q5SSH7 2924 aa3.62□□□□□ -1.83
Ubr4-212ENSMUST00000165860 Rev3lQ61493 3122 aa3.62□□□□□ -1.83
Ubr4-212ENSMUST00000165860 Gm16253D3Z167 63 aa3.61□□□□□ -1.83
Ubr4-212ENSMUST00000165860 Gm11565A2A4M7 156 aa3.61□□□□□ -1.83
Ubr4-212ENSMUST00000165860 Cdh23Q99PF4 3354 aa3.61□□□□□ -1.83
Ubr4-212ENSMUST00000165860 Celsr2Q9R0M0 2920 aa3.6□□□□□ -1.83
Ubr4-212ENSMUST00000165860 Gm3233E9Q2H5 230 aa3.6□□□□□ -1.83
Ubr4-212ENSMUST00000165860 NbdyA0A0N4SUI7 68 aa3.59□□□□□ -1.83
Ubr4-212ENSMUST00000165860 BptfA2A654 3036 aaKnown RBP3.58□□□□□ -1.84
Ubr4-212ENSMUST00000165860 AtmQ62388 3066 aa3.57□□□□□ -1.84
Ubr4-212ENSMUST00000165860 Celsr3Q91ZI0 3301 aa3.56□□□□□ -1.84
Ubr4-212ENSMUST00000165860 NbeaQ9EPN1 2936 aa3.55□□□□□ -1.84
Ubr4-212ENSMUST00000165860 Gm17416Q30KP4 66 aa3.55□□□□□ -1.84
Ubr4-212ENSMUST00000165860 Trank1Q8BV79 2999 aa3.55□□□□□ -1.84
Ubr4-212ENSMUST00000165860 Col12a1Q60847 3120 aa3.55□□□□□ -1.84
Ubr4-212ENSMUST00000165860 Gm7138L7N2C3 230 aa3.54□□□□□ -1.84
Ubr4-212ENSMUST00000165860 Gm3238W4VSP7 230 aa3.54□□□□□ -1.84
Ubr4-212ENSMUST00000165860 Gm19426M0QWC7 77 aa3.54□□□□□ -1.84
Ubr4-212ENSMUST00000165860 AspmQ8CJ27 3122 aa3.54□□□□□ -1.84
Ubr4-212ENSMUST00000165860 Gm5965D3Z724 196 aa3.54□□□□□ -1.84
Ubr4-212ENSMUST00000165860 Gm9508A0A1W2P7W0 230 aa3.54□□□□□ -1.84
Ubr4-212ENSMUST00000165860 Gm7137J3QMW1 236 aa3.52□□□□□ -1.85
Ubr4-212ENSMUST00000165860 Tenm1Q9WTS4 2731 aa3.52□□□□□ -1.85
Ubr4-212ENSMUST00000165860 FryE9Q8I9 3020 aa3.51□□□□□ -1.85
Ubr4-212ENSMUST00000165860 Pdzd2E9Q1M1 2796 aa3.51□□□□□ -1.85
Ubr4-212ENSMUST00000165860 Srrm2Q8BTI8 2703 aaKnown RBP3.5□□□□□ -1.85
Ubr4-212ENSMUST00000165860 TgO08710 2766 aa3.49□□□□□ -1.85
Retrieved 100 of 22,080 RNA–protein pairs in 70.3 ms