RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 Ep400Q8CHI8 3072 aaKnown RBP10.21□□□□□ -0.78
Ubr3-202ENSMUST00000112251 Cep350E9Q309 3095 aa10.19□□□□□ -0.78
Ubr3-202ENSMUST00000112251 Unc79Q0KK59 2596 aa10.19□□□□□ -0.78
Ubr3-202ENSMUST00000112251 Bahcc1Q3UHR0 2643 aa10.18□□□□□ -0.78
Ubr3-202ENSMUST00000112251 BC029722A0A0N4SW31 51 aa10.17□□□□□ -0.78
Ubr3-202ENSMUST00000112251 Gm10065F6TJM2 114 aa10.13□□□□□ -0.79
Ubr3-202ENSMUST00000112251 Gm9508A0A1W2P7W0 230 aa10.12□□□□□ -0.79
Ubr3-202ENSMUST00000112251 Gm7138L7N2C3 230 aa10.11□□□□□ -0.79
Ubr3-202ENSMUST00000112251 Gm3238W4VSP7 230 aa10.11□□□□□ -0.79
Ubr3-202ENSMUST00000112251 Prune2Q52KR3 3084 aa10.11□□□□□ -0.79
Ubr3-202ENSMUST00000112251 Stab1Q8R4Y4 2571 aa10.1□□□□□ -0.79
Ubr3-202ENSMUST00000112251 Gm9195A0A140LHT4 2805 aa10.09□□□□□ -0.79
Ubr3-202ENSMUST00000112251 2310050C09RikG5E8Z3 280 aa10.08□□□□□ -0.8
Ubr3-202ENSMUST00000112251 NipblQ6KCD5 2798 aaKnown RBP10.05□□□□□ -0.8
Ubr3-202ENSMUST00000112251 Ndufaf8A2AMZ4 74 aa10.02□□□□□ -0.8
Ubr3-202ENSMUST00000112251 Lama3Q61789 3330 aa10.02□□□□□ -0.81
Ubr3-202ENSMUST00000112251 Unc80Q8BLN6 3261 aa10.01□□□□□ -0.81
Ubr3-202ENSMUST00000112251 Gm7137J3QMW1 236 aa9.98□□□□□ -0.81
Ubr3-202ENSMUST00000112251 Gm5767A0A0J9YTU8 78 aa9.98□□□□□ -0.81
Ubr3-202ENSMUST00000112251 Ash1lQ99MY8 2958 aa9.97□□□□□ -0.81
Ubr3-202ENSMUST00000112251 Gm10139O88245 57 aa9.97□□□□□ -0.81
Ubr3-202ENSMUST00000112251 Celsr3Q91ZI0 3301 aa9.97□□□□□ -0.81
Ubr3-202ENSMUST00000112251 Myo18bE9PV66 2605 aa9.96□□□□□ -0.81
Ubr3-202ENSMUST00000112251 Cystm1Q8K353 104 aa9.96□□□□□ -0.82
Ubr3-202ENSMUST00000112251 DspE9Q557 2883 aaKnown RBP9.93□□□□□ -0.82
Ubr3-202ENSMUST00000112251 9530053A07RikE9PVG8 2581 aa9.92□□□□□ -0.82
Ubr3-202ENSMUST00000112251 1700042G07RikB1AUF7 90 aa9.92□□□□□ -0.82
Ubr3-202ENSMUST00000112251 CenpfE9Q3P4 2997 aaKnown RBP9.92□□□□□ -0.82
Ubr3-202ENSMUST00000112251 Gm9112A2AI92 75 aa9.89□□□□□ -0.83
Ubr3-202ENSMUST00000112251 Lama1P19137 3084 aa9.87□□□□□ -0.83
Ubr3-202ENSMUST00000112251 Usp34Q6ZQ93 3582 aa9.87□□□□□ -0.83
Ubr3-202ENSMUST00000112251 Map1aQ9QYR6 2776 aa9.84□□□□□ -0.83
Ubr3-202ENSMUST00000112251 Gm16253D3Z167 63 aa9.82□□□□□ -0.84
Ubr3-202ENSMUST00000112251 Zfp292Q9Z2U2 2698 aa9.79□□□□□ -0.84
Ubr3-202ENSMUST00000112251 Vps13aQ5H8C4 3166 aa9.78□□□□□ -0.84
Ubr3-202ENSMUST00000112251 Zfhx3Q61329 3726 aa9.78□□□□□ -0.84
Ubr3-202ENSMUST00000112251 Cfap54Q8C6S9 3106 aa9.76□□□□□ -0.85
Ubr3-202ENSMUST00000112251 4933415A04RikQ9D443 101 aa9.75□□□□□ -0.85
Ubr3-202ENSMUST00000112251 Gm21887J3QQ04 176 aa9.75□□□□□ -0.85
Ubr3-202ENSMUST00000112251 TrioQ0KL02 3102 aa9.74□□□□□ -0.85
Ubr3-202ENSMUST00000112251 Gcn1E9PVA8 2671 aaKnown RBP9.73□□□□□ -0.85
Ubr3-202ENSMUST00000112251 Sprr1aQ62266 144 aa9.73□□□□□ -0.85
Ubr3-202ENSMUST00000112251 Cdh23Q99PF4 3354 aa9.73□□□□□ -0.85
Ubr3-202ENSMUST00000112251 Cox6b2Q80ZN9 88 aa9.72□□□□□ -0.85
Ubr3-202ENSMUST00000112251 Gm17349F7BGH6 99 aa9.71□□□□□ -0.85
Ubr3-202ENSMUST00000112251 Tnp1P10856 55 aa9.71□□□□□ -0.85
Ubr3-202ENSMUST00000112251 ApcQ61315 2845 aa9.71□□□□□ -0.86
Ubr3-202ENSMUST00000112251 AtmQ62388 3066 aa9.7□□□□□ -0.86
Ubr3-202ENSMUST00000112251 Frem2Q6NVD0 3160 aa9.69□□□□□ -0.86
Ubr3-202ENSMUST00000112251 KalrnA2CG49 2964 aa9.68□□□□□ -0.86
Ubr3-202ENSMUST00000112251 Krtap29-1A2A5X4 342 aa9.67□□□□□ -0.86
Ubr3-202ENSMUST00000112251 A730071L15RikQ8C4X0 137 aa9.66□□□□□ -0.86
Ubr3-202ENSMUST00000112251 Dmxl2Q8BPN8 3032 aa9.65□□□□□ -0.86
Ubr3-202ENSMUST00000112251 Chd6A3KFM7 2711 aa9.65□□□□□ -0.87
Ubr3-202ENSMUST00000112251 FryE9Q8I9 3020 aa9.64□□□□□ -0.87
Ubr3-202ENSMUST00000112251 Krtap13O88375 197 aa9.63□□□□□ -0.87
Ubr3-202ENSMUST00000112251 FlnaQ8BTM8 2647 aaKnown RBP9.61□□□□□ -0.87
Ubr3-202ENSMUST00000112251 Igsf10Q3V1M1 2594 aa9.61□□□□□ -0.87
Ubr3-202ENSMUST00000112251 AtrQ9JKK8 2635 aa9.61□□□□□ -0.87
Ubr3-202ENSMUST00000112251 HttP42859 3119 aa9.59□□□□□ -0.87
Ubr3-202ENSMUST00000112251 Dmxl1Q6PNC0 3013 aa9.57□□□□□ -0.88
Ubr3-202ENSMUST00000112251 Krtap14O08640 167 aa9.52□□□□□ -0.89
Ubr3-202ENSMUST00000112251 Brca2P97929 3329 aa9.52□□□□□ -0.89
Ubr3-202ENSMUST00000112251 Myo15bI7HPW8 3033 aa9.49□□□□□ -0.89
Ubr3-202ENSMUST00000112251 Gm7173A0A0G2JEB6 3132 aa9.49□□□□□ -0.89
Ubr3-202ENSMUST00000112251 Gm36176A0A1W2P8D5 158 aa9.47□□□□□ -0.89
Ubr3-202ENSMUST00000112251 Wdfy4E9Q2M9 3149 aa9.45□□□□□ -0.9
Ubr3-202ENSMUST00000112251 Lelp1Q9DAE3 120 aa9.44□□□□□ -0.9
Ubr3-202ENSMUST00000112251 FlnbQ80X90 2602 aaKnown RBP9.43□□□□□ -0.9
Ubr3-202ENSMUST00000112251 Ubr5Q80TP3 2792 aa9.43□□□□□ -0.9
Ubr3-202ENSMUST00000112251 Szt2A2A9C3 3431 aa9.4□□□□□ -0.9
Ubr3-202ENSMUST00000112251 Utp20Q5XG71 2788 aaKnown RBP9.4□□□□□ -0.9
Ubr3-202ENSMUST00000112251 Col6a3E9PWQ3 3284 aa9.35□□□□□ -0.91
Ubr3-202ENSMUST00000112251 Gm9507D3Z5T3 223 aa9.34□□□□□ -0.91
Ubr3-202ENSMUST00000112251 Stab2Q8R4U0 2559 aa9.34□□□□□ -0.91
Ubr3-202ENSMUST00000112251 Mast4Q811L6 2618 aa9.33□□□□□ -0.92
Ubr3-202ENSMUST00000112251 Gm2310J3QNJ2 377 aa9.32□□□□□ -0.92
Ubr3-202ENSMUST00000112251 Dchs2A0A0A6YW72 3346 aa9.32□□□□□ -0.92
Ubr3-202ENSMUST00000112251 Tep1P97499 2629 aa9.32□□□□□ -0.92
Ubr3-202ENSMUST00000112251 Chd7A2AJK6 2986 aaKnown RBP9.31□□□□□ -0.92
Ubr3-202ENSMUST00000112251 Akap9Q70FJ1 3797 aa9.31□□□□□ -0.92
Ubr3-202ENSMUST00000112251 Gm40193A0A1B0GT39 78 aa9.31□□□□□ -0.92
Ubr3-202ENSMUST00000112251 Col12a1Q60847 3120 aa9.29□□□□□ -0.92
Ubr3-202ENSMUST00000112251 FrylF8VQ05 3007 aa9.29□□□□□ -0.92
Ubr3-202ENSMUST00000112251 Rev3lQ61493 3122 aa9.27□□□□□ -0.93
Ubr3-202ENSMUST00000112251 Itpr2Q9Z329 2701 aa9.27□□□□□ -0.93
Ubr3-202ENSMUST00000112251 Krtap10-4Q08EG8 221 aa9.26□□□□□ -0.93
Ubr3-202ENSMUST00000112251 SpegQ62407 3262 aa9.26□□□□□ -0.93
Ubr3-202ENSMUST00000112251 Myo15aQ9QZZ4 3511 aa9.25□□□□□ -0.93
Ubr3-202ENSMUST00000112251 Pkd1l1Q8R526 2615 aa9.25□□□□□ -0.93
Ubr3-202ENSMUST00000112251 2310057N15RikQ9D6T8 200 aa9.23□□□□□ -0.93
Ubr3-202ENSMUST00000112251 Rps29P62274 56 aa9.18□□□□□ -0.94
Ubr3-202ENSMUST00000112251 MgaA2AWL7 3003 aaKnown RBP9.18□□□□□ -0.94
Ubr3-202ENSMUST00000112251 AspmQ8CJ27 3122 aa9.18□□□□□ -0.94
Ubr3-202ENSMUST00000112251 D6Ertd527eA0A0N4SWI3 464 aa9.17□□□□□ -0.94
Ubr3-202ENSMUST00000112251 Chd9Q8BYH8 2885 aa9.17□□□□□ -0.94
Ubr3-202ENSMUST00000112251 SmcpP15265 143 aa9.17□□□□□ -0.94
Ubr3-202ENSMUST00000112251 Gm5965D3Z724 196 aa9.16□□□□□ -0.94
Ubr3-202ENSMUST00000112251 Lrrc37aB1AWG4 3215 aa9.15□□□□□ -0.94
Ubr3-202ENSMUST00000112251 VcanQ62059 3357 aa9.15□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 61.2 ms