RNA–Protein interactions for RNA: ENSMUST00000106653.3

Usp47-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Usp47, Length 5,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-201ENSMUST00000106653 Bod1lE9Q6J5 3032 aa10.42□□□□□ -0.74
Usp47-201ENSMUST00000106653 Sprr1aQ62266 144 aa10.41□□□□□ -0.74
Usp47-201ENSMUST00000106653 2310034C09RikQ9D746 214 aa10.41□□□□□ -0.74
Usp47-201ENSMUST00000106653 Gm10139O88245 57 aa10.38□□□□□ -0.75
Usp47-201ENSMUST00000106653 Odf3bQ5M8M2 238 aa10.35□□□□□ -0.75
Usp47-201ENSMUST00000106653 Mp68P56379 58 aa10.33□□□□□ -0.76
Usp47-201ENSMUST00000106653 Gm9508A0A1W2P7W0 230 aa10.33□□□□□ -0.76
Usp47-201ENSMUST00000106653 6030445D17RikE9Q8F9 148 aa10.33□□□□□ -0.76
Usp47-201ENSMUST00000106653 Map1aQ9QYR6 2776 aa10.33□□□□□ -0.76
Usp47-201ENSMUST00000106653 Stab1Q8R4Y4 2571 aa10.32□□□□□ -0.76
Usp47-201ENSMUST00000106653 Gm21798J3QNU5 87 aa10.32□□□□□ -0.76
Usp47-201ENSMUST00000106653 Gm10643Q3URG9 111 aa10.31□□□□□ -0.76
Usp47-201ENSMUST00000106653 Notch1Q01705 2531 aa10.3□□□□□ -0.76
Usp47-201ENSMUST00000106653 Gm9821Q8K076 103 aa10.3□□□□□ -0.76
Usp47-201ENSMUST00000106653 MgaA2AWL7 3003 aaKnown RBP10.27□□□□□ -0.77
Usp47-201ENSMUST00000106653 Dmxl1Q6PNC0 3013 aa10.25□□□□□ -0.77
Usp47-201ENSMUST00000106653 Fn1P11276 2477 aaKnown RBP10.25□□□□□ -0.77
Usp47-201ENSMUST00000106653 Fbn2Q61555 2907 aa10.24□□□□□ -0.77
Usp47-201ENSMUST00000106653 Gm4491E0CX42 125 aa10.23□□□□□ -0.77
Usp47-201ENSMUST00000106653 Cdh23Q99PF4 3354 aa10.23□□□□□ -0.77
Usp47-201ENSMUST00000106653 NipblQ6KCD5 2798 aaKnown RBP10.21□□□□□ -0.77
Usp47-201ENSMUST00000106653 Cystm1Q8K353 104 aa10.19□□□□□ -0.78
Usp47-201ENSMUST00000106653 KalrnA2CG49 2964 aa10.16□□□□□ -0.78
Usp47-201ENSMUST00000106653 A730071L15RikQ8C4X0 137 aa10.15□□□□□ -0.78
Usp47-201ENSMUST00000106653 Ash1lQ99MY8 2958 aa10.14□□□□□ -0.79
Usp47-201ENSMUST00000106653 Mast4Q811L6 2618 aa10.14□□□□□ -0.79
Usp47-201ENSMUST00000106653 Itpr3P70227 2670 aa10.13□□□□□ -0.79
Usp47-201ENSMUST00000106653 Gm16253D3Z167 63 aa10.13□□□□□ -0.79
Usp47-201ENSMUST00000106653 Krtap29-1A2A5X4 342 aa10.13□□□□□ -0.79
Usp47-201ENSMUST00000106653 HrnrQ8VHD8 2496 aa10.12□□□□□ -0.79
Usp47-201ENSMUST00000106653 Gm9955Q8CEJ8 102 aa10.09□□□□□ -0.79
Usp47-201ENSMUST00000106653 Ranbp2Q9ERU9 3053 aaKnown RBP10.07□□□□□ -0.8
Usp47-201ENSMUST00000106653 Krtap15-1Q9QZU5 150 aa10.07□□□□□ -0.8
Usp47-201ENSMUST00000106653 Akap13E9Q394 2776 aa10.06□□□□□ -0.8
Usp47-201ENSMUST00000106653 Gm37013Q8K491 104 aa10.03□□□□□ -0.8
Usp47-201ENSMUST00000106653 Gm3880A0A1B0GSB3 72 aa10.03□□□□□ -0.8
Usp47-201ENSMUST00000106653 Cfap54Q8C6S9 3106 aa10.03□□□□□ -0.8
Usp47-201ENSMUST00000106653 Gm9507D3Z5T3 223 aa10□□□□□ -0.81
Usp47-201ENSMUST00000106653 Szt2A2A9C3 3431 aa10□□□□□ -0.81
Usp47-201ENSMUST00000106653 Igsf10Q3V1M1 2594 aa9.98□□□□□ -0.81
Usp47-201ENSMUST00000106653 Chd6A3KFM7 2711 aa9.98□□□□□ -0.81
Usp47-201ENSMUST00000106653 Pla2g10Q9QXX3 151 aa9.97□□□□□ -0.81
Usp47-201ENSMUST00000106653 Spink7Q6IE32 76 aa9.97□□□□□ -0.81
Usp47-201ENSMUST00000106653 CriptO70333 101 aa9.96□□□□□ -0.81
Usp47-201ENSMUST00000106653 Ubr5Q80TP3 2792 aa9.96□□□□□ -0.82
Usp47-201ENSMUST00000106653 Krtap13O88375 197 aa9.94□□□□□ -0.82
Usp47-201ENSMUST00000106653 Gm20538F6Z9R1 75 aa9.9□□□□□ -0.82
Usp47-201ENSMUST00000106653 Muc2Q80Z19 2680 aa9.9□□□□□ -0.82
Usp47-201ENSMUST00000106653 Vps13aQ5H8C4 3166 aa9.89□□□□□ -0.83
Usp47-201ENSMUST00000106653 2310050C09RikG5E8Z3 280 aa9.89□□□□□ -0.83
Usp47-201ENSMUST00000106653 2310061N02RikQ9D6S9 174 aa9.89□□□□□ -0.83
Usp47-201ENSMUST00000106653 Tep1P97499 2629 aa9.87□□□□□ -0.83
Usp47-201ENSMUST00000106653 Kmt2bO08550 2713 aa9.86□□□□□ -0.83
Usp47-201ENSMUST00000106653 AtmQ62388 3066 aa9.86□□□□□ -0.83
Usp47-201ENSMUST00000106653 Gm5767A0A0J9YTU8 78 aa9.83□□□□□ -0.84
Usp47-201ENSMUST00000106653 Krtap10-4Q08EG8 221 aa9.81□□□□□ -0.84
Usp47-201ENSMUST00000106653 Fam229aB2KGE5 128 aa9.81□□□□□ -0.84
Usp47-201ENSMUST00000106653 Lrrc37aB1AWG4 3215 aa9.8□□□□□ -0.84
Usp47-201ENSMUST00000106653 Nbeal2Q6ZQA0 2742 aa9.8□□□□□ -0.84
Usp47-201ENSMUST00000106653 Krtap14O08640 167 aa9.79□□□□□ -0.84
Usp47-201ENSMUST00000106653 AspmQ8CJ27 3122 aa9.78□□□□□ -0.84
Usp47-201ENSMUST00000106653 Unc80Q8BLN6 3261 aa9.78□□□□□ -0.84
Usp47-201ENSMUST00000106653 Sec61bQ9CQS8 96 aaKnown RBP9.77□□□□□ -0.84
Usp47-201ENSMUST00000106653 Celsr1O35161 3034 aa9.77□□□□□ -0.85
Usp47-201ENSMUST00000106653 Stab2Q8R4U0 2559 aa9.75□□□□□ -0.85
Usp47-201ENSMUST00000106653 9530053A07RikE9PVG8 2581 aa9.74□□□□□ -0.85
Usp47-201ENSMUST00000106653 Gm2310J3QNJ2 377 aa9.68□□□□□ -0.86
Usp47-201ENSMUST00000106653 Gm3646F6S692 53 aa9.67□□□□□ -0.86
Usp47-201ENSMUST00000106653 Krtap10-10A0A1W2P7T6 217 aa9.66□□□□□ -0.86
Usp47-201ENSMUST00000106653 Col6a5A6H584 2640 aa9.66□□□□□ -0.86
Usp47-201ENSMUST00000106653 Pkd1l1Q8R526 2615 aa9.66□□□□□ -0.86
Usp47-201ENSMUST00000106653 Wdfy4E9Q2M9 3149 aa9.65□□□□□ -0.86
Usp47-201ENSMUST00000106653 Hivep1Q03172 2688 aa9.65□□□□□ -0.87
Usp47-201ENSMUST00000106653 Utp20Q5XG71 2788 aaKnown RBP9.64□□□□□ -0.87
Usp47-201ENSMUST00000106653 Itpr2Q9Z329 2701 aa9.64□□□□□ -0.87
Usp47-201ENSMUST00000106653 Tnp2P11378 117 aa9.64□□□□□ -0.87
Usp47-201ENSMUST00000106653 BptfA2A654 3036 aaKnown RBP9.62□□□□□ -0.87
Usp47-201ENSMUST00000106653 Celsr3Q91ZI0 3301 aa9.61□□□□□ -0.87
Usp47-201ENSMUST00000106653 Camk2n1Q6QWF9 78 aa9.6□□□□□ -0.87
Usp47-201ENSMUST00000106653 Rps29P62274 56 aa9.58□□□□□ -0.88
Usp47-201ENSMUST00000106653 FryE9Q8I9 3020 aa9.57□□□□□ -0.88
Usp47-201ENSMUST00000106653 NbeaQ9EPN1 2936 aa9.57□□□□□ -0.88
Usp47-201ENSMUST00000106653 Adgrg4B7ZCC9 3073 aa9.56□□□□□ -0.88
Usp47-201ENSMUST00000106653 FrylF8VQ05 3007 aa9.55□□□□□ -0.88
Usp47-201ENSMUST00000106653 Rpl37Q9D823 97 aa9.54□□□□□ -0.88
Usp47-201ENSMUST00000106653 Lama1P19137 3084 aa9.53□□□□□ -0.88
Usp47-201ENSMUST00000106653 BC029722A0A0N4SW31 51 aa9.53□□□□□ -0.88
Usp47-201ENSMUST00000106653 Dmxl2Q8BPN8 3032 aa9.52□□□□□ -0.88
Usp47-201ENSMUST00000106653 Frem2Q6NVD0 3160 aa9.52□□□□□ -0.89
Usp47-201ENSMUST00000106653 Gm19426M0QWC7 77 aa9.49□□□□□ -0.89
Usp47-201ENSMUST00000106653 Brca2P97929 3329 aa9.47□□□□□ -0.89
Usp47-201ENSMUST00000106653 4933415A04RikQ9D443 101 aa9.47□□□□□ -0.89
Usp47-201ENSMUST00000106653 Romo1P60603 79 aa9.46□□□□□ -0.9
Usp47-201ENSMUST00000106653 Gm2696A0A1W2P709 240 aa9.45□□□□□ -0.9
Usp47-201ENSMUST00000106653 Igfn1Q3KNY0 2849 aa9.43□□□□□ -0.9
Usp47-201ENSMUST00000106653 SmcpP15265 143 aa9.39□□□□□ -0.91
Usp47-201ENSMUST00000106653 Tex15F8VPN2 2785 aa9.39□□□□□ -0.91
Usp47-201ENSMUST00000106653 FcgbpE9Q0B5 2583 aa9.36□□□□□ -0.91
Usp47-201ENSMUST00000106653 Zzef1Q5SSH7 2924 aa9.36□□□□□ -0.91
Usp47-201ENSMUST00000106653 Tenm4Q3UHK6 2771 aa9.34□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 55.7 ms