RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 A530084C06RikQ3UTW2 186 aa11.95□□□□□ -0.5
Trim47-202ENSMUST00000106441 Defb37Q7TMD2 62 aa11.95□□□□□ -0.5
Trim47-202ENSMUST00000106441 Stab2Q8R4U0 2559 aa11.94□□□□□ -0.5
Trim47-202ENSMUST00000106441 Sfta2E9PXB6 77 aa11.94□□□□□ -0.5
Trim47-202ENSMUST00000106441 Sprr2jO70561 109 aa11.93□□□□□ -0.5
Trim47-202ENSMUST00000106441 Gm10570F6VB42 170 aa11.92□□□□□ -0.5
Trim47-202ENSMUST00000106441 Q8BT88 171 aa11.91□□□□□ -0.5
Trim47-202ENSMUST00000106441 Igkv1-122A0A140T8M9 119 aa11.89□□□□□ -0.51
Trim47-202ENSMUST00000106441 Gm9507D3Z5T3 223 aa11.88□□□□□ -0.51
Trim47-202ENSMUST00000106441 Gm11011D3Z3L9 86 aa11.87□□□□□ -0.51
Trim47-202ENSMUST00000106441 Dync2h1Q45VK7 4306 aa11.87□□□□□ -0.51
Trim47-202ENSMUST00000106441 Spink8Q09TK9 105 aa11.86□□□□□ -0.51
Trim47-202ENSMUST00000106441 Dmac1Q9CQ00 111 aa11.84□□□□□ -0.51
Trim47-202ENSMUST00000106441 Dnah1E9Q8T7 4250 aa11.83□□□□□ -0.52
Trim47-202ENSMUST00000106441 Cox6a2P43023 97 aa11.83□□□□□ -0.52
Trim47-202ENSMUST00000106441 A330070K13RikQ8CA53 115 aa11.83□□□□□ -0.52
Trim47-202ENSMUST00000106441 Smim29Q8R043 75 aa11.83□□□□□ -0.52
Trim47-202ENSMUST00000106441 Gm11627A6PWP4 55 aa11.82□□□□□ -0.52
Trim47-202ENSMUST00000106441 Dnah7bL7N1Y0 4068 aa11.82□□□□□ -0.52
Trim47-202ENSMUST00000106441 Gm37389A0A0A6YW05 95 aa11.82□□□□□ -0.52
Trim47-202ENSMUST00000106441 Gm9918Q8BUR5 174 aa11.81□□□□□ -0.52
Trim47-202ENSMUST00000106441 A0A286YE02 88 aa11.8□□□□□ -0.52
Trim47-202ENSMUST00000106441 Defa28D3Z1V9 94 aa11.8□□□□□ -0.52
Trim47-202ENSMUST00000106441 Igkv3-2A0A075B5P0 119 aa11.79□□□□□ -0.52
Trim47-202ENSMUST00000106441 A930002H24RikQ8C8Y3 163 aa11.79□□□□□ -0.52
Trim47-202ENSMUST00000106441 Prr15lQ8JZM2 100 aa11.79□□□□□ -0.52
Trim47-202ENSMUST00000106441 Ly6g6cQ9Z1Q4 126 aa11.79□□□□□ -0.52
Trim47-202ENSMUST00000106441 P84750 121 aa11.78□□□□□ -0.52
Trim47-202ENSMUST00000106441 OxtP35454 125 aa11.78□□□□□ -0.52
Trim47-202ENSMUST00000106441 2310061N02RikQ9D6S9 174 aa11.78□□□□□ -0.52
Trim47-202ENSMUST00000106441 Sprr1aQ62266 144 aa11.77□□□□□ -0.53
Trim47-202ENSMUST00000106441 Fras1Q80T14 4010 aa11.76□□□□□ -0.53
Trim47-202ENSMUST00000106441 Wfdc6bF6ULY1 148 aa11.76□□□□□ -0.53
Trim47-202ENSMUST00000106441 Cdc42se1Q8BHL7 80 aa11.76□□□□□ -0.53
Trim47-202ENSMUST00000106441 Gm16485Q8C4B7 115 aa11.76□□□□□ -0.53
Trim47-202ENSMUST00000106441 Bean1Q9EQG5 255 aa11.76□□□□□ -0.53
Trim47-202ENSMUST00000106441 Prol1E9PYQ4 312 aa11.75□□□□□ -0.53
Trim47-202ENSMUST00000106441 Coa6Q8BGD8 79 aa11.74□□□□□ -0.53
Trim47-202ENSMUST00000106441 Gm12353A2AGJ4 60 aa11.73□□□□□ -0.53
Trim47-202ENSMUST00000106441 Spint4Q9D263 159 aa11.72□□□□□ -0.53
Trim47-202ENSMUST00000106441 Obox2E9PXV9 151 aa11.72□□□□□ -0.53
Trim47-202ENSMUST00000106441 C130032M10RikQ8C888 123 aa11.72□□□□□ -0.53
Trim47-202ENSMUST00000106441 PlecQ9QXS1 4691 aaKnown RBP11.71□□□□□ -0.53
Trim47-202ENSMUST00000106441 Mrpl34Q99N91 92 aa11.71□□□□□ -0.54
Trim47-202ENSMUST00000106441 Gm37013Q8K491 104 aa11.7□□□□□ -0.54
Trim47-202ENSMUST00000106441 Igkv3-4A0A140T8Q4 119 aa11.69□□□□□ -0.54
Trim47-202ENSMUST00000106441 Krtap10-10A0A1W2P7T6 217 aa11.68□□□□□ -0.54
Trim47-202ENSMUST00000106441 Vpreb3D3Z6J4 130 aa11.68□□□□□ -0.54
Trim47-202ENSMUST00000106441 2310050C09RikG5E8Z3 280 aa11.68□□□□□ -0.54
Trim47-202ENSMUST00000106441 Fam168bQ80XQ8 194 aa11.67□□□□□ -0.54
Trim47-202ENSMUST00000106441 PscaP57096 123 aa11.66□□□□□ -0.54
Trim47-202ENSMUST00000106441 Igkv8-19A0A0G2JFN8 121 aa11.65□□□□□ -0.54
Trim47-202ENSMUST00000106441 AI606181Q8C7B9 129 aa11.65□□□□□ -0.54
Trim47-202ENSMUST00000106441 Gm10197F6QEY5 67 aa11.64□□□□□ -0.55
Trim47-202ENSMUST00000106441 Igkv3-12A0A140T8P0 119 aa11.62□□□□□ -0.55
Trim47-202ENSMUST00000106441 Gm17521F6QAC8 156 aa11.62□□□□□ -0.55
Trim47-202ENSMUST00000106441 Gm44790A0A0N4SV91 103 aa11.62□□□□□ -0.55
Trim47-202ENSMUST00000106441 U90926O08546 118 aa11.61□□□□□ -0.55
Trim47-202ENSMUST00000106441 Ube2bP63147 152 aa11.61□□□□□ -0.55
Trim47-202ENSMUST00000106441 Dnah7aE9Q0T8 4024 aa11.6□□□□□ -0.55
Trim47-202ENSMUST00000106441 Fam104aA2A6P4 185 aa11.59□□□□□ -0.55
Trim47-202ENSMUST00000106441 Sox16Q62247 57 aa11.58□□□□□ -0.56
Trim47-202ENSMUST00000106441 Atox1O08997 68 aaKnown RBP11.57□□□□□ -0.56
Trim47-202ENSMUST00000106441 Defb40Q70KL2 73 aa11.56□□□□□ -0.56
Trim47-202ENSMUST00000106441 Coa5Q99M07 74 aa11.56□□□□□ -0.56
Trim47-202ENSMUST00000106441 Igkv3-10A0A0G2JGN0 119 aa11.55□□□□□ -0.56
Trim47-202ENSMUST00000106441 TgO08710 2766 aa11.54□□□□□ -0.56
Trim47-202ENSMUST00000106441 1700018G05RikA0A1B0GSI2 66 aa11.52□□□□□ -0.57
Trim47-202ENSMUST00000106441 Nupr2Q497P3 102 aa11.5□□□□□ -0.57
Trim47-202ENSMUST00000106441 Gm21886J3QJU9 214 aa11.49□□□□□ -0.57
Trim47-202ENSMUST00000106441 Chchd10Q7TNL9 138 aa11.48□□□□□ -0.57
Trim47-202ENSMUST00000106441 Defb12Q8K4N3 78 aa11.47□□□□□ -0.57
Trim47-202ENSMUST00000106441 4933415A04RikQ9D443 101 aa11.47□□□□□ -0.57
Trim47-202ENSMUST00000106441 Dnah7cA0A087WR13 4024 aa11.46□□□□□ -0.57
Trim47-202ENSMUST00000106441 Gm10139O88245 57 aa11.44□□□□□ -0.58
Trim47-202ENSMUST00000106441 Zcchc13Q9D548 170 aa11.44□□□□□ -0.58
Trim47-202ENSMUST00000106441 Dnah9B1AR51 4484 aa11.44□□□□□ -0.58
Trim47-202ENSMUST00000106441 SycnQ8VCK7 134 aa11.43□□□□□ -0.58
Trim47-202ENSMUST00000106441 A0A286YE49 62 aa11.43□□□□□ -0.58
Trim47-202ENSMUST00000106441 Odf3bQ5M8M2 238 aa11.41□□□□□ -0.58
Trim47-202ENSMUST00000106441 Gm20604F8WIA3 75 aa11.4□□□□□ -0.58
Trim47-202ENSMUST00000106441 Dnah11E9Q7N9 4488 aa11.4□□□□□ -0.58
Trim47-202ENSMUST00000106441 Gm28230A0A0A0MQ91 144 aa11.4□□□□□ -0.59
Trim47-202ENSMUST00000106441 Phxr4P15974 95 aa11.38□□□□□ -0.59
Trim47-202ENSMUST00000106441 Plac8Q9JI48 112 aa11.38□□□□□ -0.59
Trim47-202ENSMUST00000106441 Reg3aO09037 175 aa11.38□□□□□ -0.59
Trim47-202ENSMUST00000106441 Krtap10-4Q08EG8 221 aa11.38□□□□□ -0.59
Trim47-202ENSMUST00000106441 Wfdc3Q14AE4 130 aa11.37□□□□□ -0.59
Trim47-202ENSMUST00000106441 Ube2aQ9Z255 152 aa11.37□□□□□ -0.59
Trim47-202ENSMUST00000106441 Gm28374F6SG70 93 aa11.36□□□□□ -0.59
Trim47-202ENSMUST00000106441 Wfdc10Q3V2J9 124 aa11.36□□□□□ -0.59
Trim47-202ENSMUST00000106441 Wfdc13Q5DQQ6 81 aa11.35□□□□□ -0.59
Trim47-202ENSMUST00000106441 Vps13dB1ART2 4390 aa11.33□□□□□ -0.6
Trim47-202ENSMUST00000106441 Sec61gP60060 68 aa11.32□□□□□ -0.6
Trim47-202ENSMUST00000106441 1700074P13RikQ9D9G7 251 aa11.32□□□□□ -0.6
Trim47-202ENSMUST00000106441 Gm10837Q3UTT8 145 aa11.31□□□□□ -0.6
Trim47-202ENSMUST00000106441 Phf5aP83870 110 aaKnown RBP11.28□□□□□ -0.6
Trim47-202ENSMUST00000106441 Ryr3A2AGL3 4863 aa11.26□□□□□ -0.61
Trim47-202ENSMUST00000106441 Igkv3-7A0A0G2JE31 119 aa11.26□□□□□ -0.61
Trim47-202ENSMUST00000106441 Q8K1L6 76 aa11.26□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 7.4 ms