RNA–Protein interactions for RNA: ENSMUST00000084838.12

Cd47-201, Transcript of Leukocyte surface antigen CD47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cd47, Length 5,277 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47-201ENSMUST00000084838 Col12a1Q60847 3120 aa11.47□□□□□ -0.57
Cd47-201ENSMUST00000084838 Fbn2Q61555 2907 aa11.46□□□□□ -0.57
Cd47-201ENSMUST00000084838 Smim29Q8R043 75 aa11.43□□□□□ -0.58
Cd47-201ENSMUST00000084838 Gm36176A0A1W2P8D5 158 aa11.42□□□□□ -0.58
Cd47-201ENSMUST00000084838 Dmxl1Q6PNC0 3013 aa11.42□□□□□ -0.58
Cd47-201ENSMUST00000084838 Gm9821Q8K076 103 aa11.4□□□□□ -0.59
Cd47-201ENSMUST00000084838 HrnrQ8VHD8 2496 aa11.39□□□□□ -0.59
Cd47-201ENSMUST00000084838 Mki67E9PVX6 3177 aaKnown RBP11.38□□□□□ -0.59
Cd47-201ENSMUST00000084838 KalrnA2CG49 2964 aa11.38□□□□□ -0.59
Cd47-201ENSMUST00000084838 HttP42859 3119 aa11.37□□□□□ -0.59
Cd47-201ENSMUST00000084838 9530053A07RikE9PVG8 2581 aa11.36□□□□□ -0.59
Cd47-201ENSMUST00000084838 Phxr4P15974 95 aa11.34□□□□□ -0.59
Cd47-201ENSMUST00000084838 Uqcr11Q9CPX8 56 aa11.34□□□□□ -0.59
Cd47-201ENSMUST00000084838 Rev3lQ61493 3122 aa11.34□□□□□ -0.59
Cd47-201ENSMUST00000084838 Muc2Q80Z19 2680 aa11.31□□□□□ -0.6
Cd47-201ENSMUST00000084838 Ash1lQ99MY8 2958 aa11.29□□□□□ -0.6
Cd47-201ENSMUST00000084838 Chtf8P0CG14 533 aa11.29□□□□□ -0.6
Cd47-201ENSMUST00000084838 Col6a5A6H584 2640 aa11.28□□□□□ -0.6
Cd47-201ENSMUST00000084838 Tep1P97499 2629 aa11.26□□□□□ -0.61
Cd47-201ENSMUST00000084838 Pkd1l1Q8R526 2615 aa11.25□□□□□ -0.61
Cd47-201ENSMUST00000084838 2310034C09RikQ9D746 214 aa11.25□□□□□ -0.61
Cd47-201ENSMUST00000084838 Sprr1aQ62266 144 aa11.25□□□□□ -0.61
Cd47-201ENSMUST00000084838 Nbeal2Q6ZQA0 2742 aa11.25□□□□□ -0.61
Cd47-201ENSMUST00000084838 Prr13Q9CQJ5 137 aa11.24□□□□□ -0.61
Cd47-201ENSMUST00000084838 Bod1lE9Q6J5 3032 aa11.23□□□□□ -0.61
Cd47-201ENSMUST00000084838 6030445D17RikE9Q8F9 148 aa11.21□□□□□ -0.62
Cd47-201ENSMUST00000084838 Stab2Q8R4U0 2559 aa11.2□□□□□ -0.62
Cd47-201ENSMUST00000084838 Gm10320E9PW43 113 aa11.2□□□□□ -0.62
Cd47-201ENSMUST00000084838 Odf3bQ5M8M2 238 aa11.2□□□□□ -0.62
Cd47-201ENSMUST00000084838 Gm10139O88245 57 aa11.18□□□□□ -0.62
Cd47-201ENSMUST00000084838 Mp68P56379 58 aa11.18□□□□□ -0.62
Cd47-201ENSMUST00000084838 Gm21798J3QNU5 87 aa11.14□□□□□ -0.63
Cd47-201ENSMUST00000084838 Gm9508A0A1W2P7W0 230 aa11.14□□□□□ -0.63
Cd47-201ENSMUST00000084838 Fam229bQ8CF36 80 aa11.14□□□□□ -0.63
Cd47-201ENSMUST00000084838 Gm10643Q3URG9 111 aa11.13□□□□□ -0.63
Cd47-201ENSMUST00000084838 Usp34Q6ZQ93 3582 aa11.13□□□□□ -0.63
Cd47-201ENSMUST00000084838 Hivep1Q03172 2688 aa11.13□□□□□ -0.63
Cd47-201ENSMUST00000084838 Gm4491E0CX42 125 aa11.06□□□□□ -0.64
Cd47-201ENSMUST00000084838 Krtap15-1Q9QZU5 150 aa11.01□□□□□ -0.65
Cd47-201ENSMUST00000084838 Krtap29-1A2A5X4 342 aa10.99□□□□□ -0.65
Cd47-201ENSMUST00000084838 Gm16253D3Z167 63 aa10.99□□□□□ -0.65
Cd47-201ENSMUST00000084838 Spink7Q6IE32 76 aa10.95□□□□□ -0.66
Cd47-201ENSMUST00000084838 Itpr2Q9Z329 2701 aa10.93□□□□□ -0.66
Cd47-201ENSMUST00000084838 Pla2g10Q9QXX3 151 aa10.93□□□□□ -0.66
Cd47-201ENSMUST00000084838 Gm9955Q8CEJ8 102 aa10.91□□□□□ -0.66
Cd47-201ENSMUST00000084838 Gm20538F6Z9R1 75 aa10.91□□□□□ -0.66
Cd47-201ENSMUST00000084838 Fam229aB2KGE5 128 aa10.9□□□□□ -0.67
Cd47-201ENSMUST00000084838 Krtap13O88375 197 aa10.9□□□□□ -0.67
Cd47-201ENSMUST00000084838 Sec61bQ9CQS8 96 aaKnown RBP10.88□□□□□ -0.67
Cd47-201ENSMUST00000084838 Gm9507D3Z5T3 223 aa10.87□□□□□ -0.67
Cd47-201ENSMUST00000084838 Cfap54Q8C6S9 3106 aa10.86□□□□□ -0.67
Cd47-201ENSMUST00000084838 2310050C09RikG5E8Z3 280 aa10.86□□□□□ -0.67
Cd47-201ENSMUST00000084838 AspmQ8CJ27 3122 aa10.86□□□□□ -0.67
Cd47-201ENSMUST00000084838 AtmQ62388 3066 aa10.85□□□□□ -0.67
Cd47-201ENSMUST00000084838 Ranbp2Q9ERU9 3053 aaKnown RBP10.82□□□□□ -0.68
Cd47-201ENSMUST00000084838 Cdh23Q99PF4 3354 aa10.81□□□□□ -0.68
Cd47-201ENSMUST00000084838 A730071L15RikQ8C4X0 137 aa10.81□□□□□ -0.68
Cd47-201ENSMUST00000084838 Tex15F8VPN2 2785 aa10.81□□□□□ -0.68
Cd47-201ENSMUST00000084838 FcgbpE9Q0B5 2583 aa10.79□□□□□ -0.68
Cd47-201ENSMUST00000084838 CriptO70333 101 aa10.79□□□□□ -0.68
Cd47-201ENSMUST00000084838 Celsr1O35161 3034 aa10.78□□□□□ -0.68
Cd47-201ENSMUST00000084838 Igfn1Q3KNY0 2849 aa10.78□□□□□ -0.68
Cd47-201ENSMUST00000084838 Gm5767A0A0J9YTU8 78 aa10.78□□□□□ -0.68
Cd47-201ENSMUST00000084838 2310061N02RikQ9D6S9 174 aa10.77□□□□□ -0.69
Cd47-201ENSMUST00000084838 Utp20Q5XG71 2788 aaKnown RBP10.72□□□□□ -0.69
Cd47-201ENSMUST00000084838 Gm37013Q8K491 104 aa10.71□□□□□ -0.69
Cd47-201ENSMUST00000084838 Gm3880A0A1B0GSB3 72 aa10.71□□□□□ -0.7
Cd47-201ENSMUST00000084838 FryE9Q8I9 3020 aa10.71□□□□□ -0.7
Cd47-201ENSMUST00000084838 Cystm1Q8K353 104 aa10.69□□□□□ -0.7
Cd47-201ENSMUST00000084838 NbeaQ9EPN1 2936 aa10.68□□□□□ -0.7
Cd47-201ENSMUST00000084838 Lrrc37aB1AWG4 3215 aa10.67□□□□□ -0.7
Cd47-201ENSMUST00000084838 Tenm4Q3UHK6 2771 aa10.66□□□□□ -0.7
Cd47-201ENSMUST00000084838 Krtap10-4Q08EG8 221 aa10.66□□□□□ -0.7
Cd47-201ENSMUST00000084838 Vps13aQ5H8C4 3166 aa10.66□□□□□ -0.7
Cd47-201ENSMUST00000084838 Krtap14O08640 167 aa10.64□□□□□ -0.71
Cd47-201ENSMUST00000084838 Szt2A2A9C3 3431 aa10.58□□□□□ -0.72
Cd47-201ENSMUST00000084838 Dmxl2Q8BPN8 3032 aa10.56□□□□□ -0.72
Cd47-201ENSMUST00000084838 FlncQ8VHX6 2726 aaKnown RBP10.53□□□□□ -0.72
Cd47-201ENSMUST00000084838 FrylF8VQ05 3007 aa10.52□□□□□ -0.72
Cd47-201ENSMUST00000084838 DspE9Q557 2883 aaKnown RBP10.52□□□□□ -0.72
Cd47-201ENSMUST00000084838 Krtap10-10A0A1W2P7T6 217 aa10.51□□□□□ -0.73
Cd47-201ENSMUST00000084838 Rps29P62274 56 aa10.5□□□□□ -0.73
Cd47-201ENSMUST00000084838 Camk2n1Q6QWF9 78 aa10.49□□□□□ -0.73
Cd47-201ENSMUST00000084838 Wdfy4E9Q2M9 3149 aa10.49□□□□□ -0.73
Cd47-201ENSMUST00000084838 Tnp2P11378 117 aa10.48□□□□□ -0.73
Cd47-201ENSMUST00000084838 BptfA2A654 3036 aaKnown RBP10.48□□□□□ -0.73
Cd47-201ENSMUST00000084838 Adgrg4B7ZCC9 3073 aa10.46□□□□□ -0.73
Cd47-201ENSMUST00000084838 Gm19426M0QWC7 77 aa10.45□□□□□ -0.74
Cd47-201ENSMUST00000084838 BC029722A0A0N4SW31 51 aa10.45□□□□□ -0.74
Cd47-201ENSMUST00000084838 Unc80Q8BLN6 3261 aa10.4□□□□□ -0.75
Cd47-201ENSMUST00000084838 Zzef1Q5SSH7 2924 aa10.39□□□□□ -0.75
Cd47-201ENSMUST00000084838 Srrm2Q8BTI8 2703 aaKnown RBP10.35□□□□□ -0.75
Cd47-201ENSMUST00000084838 TgO08710 2766 aa10.35□□□□□ -0.75
Cd47-201ENSMUST00000084838 Rpl37Q9D823 97 aa10.33□□□□□ -0.76
Cd47-201ENSMUST00000084838 Lama1P19137 3084 aa10.32□□□□□ -0.76
Cd47-201ENSMUST00000084838 Gm2310J3QNJ2 377 aa10.31□□□□□ -0.76
Cd47-201ENSMUST00000084838 Gm2696A0A1W2P709 240 aa10.3□□□□□ -0.76
Cd47-201ENSMUST00000084838 Celsr2Q9R0M0 2920 aa10.29□□□□□ -0.76
Cd47-201ENSMUST00000084838 Frem2Q6NVD0 3160 aa10.28□□□□□ -0.76
Cd47-201ENSMUST00000084838 Trank1Q8BV79 2999 aa10.26□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 62.8 ms