RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Zcchc13Q9D548 170 aa9.96□□□□□ -0.82
Ubr3-201ENSMUST00000055758 Fam229aB2KGE5 128 aa9.94□□□□□ -0.82
Ubr3-201ENSMUST00000055758 Romo1P60603 79 aa9.93□□□□□ -0.82
Ubr3-201ENSMUST00000055758 DspE9Q557 2883 aaKnown RBP9.93□□□□□ -0.82
Ubr3-201ENSMUST00000055758 9530053A07RikE9PVG8 2581 aa9.92□□□□□ -0.82
Ubr3-201ENSMUST00000055758 Cystm1Q8K353 104 aa9.89□□□□□ -0.83
Ubr3-201ENSMUST00000055758 AtrQ9JKK8 2635 aa9.88□□□□□ -0.83
Ubr3-201ENSMUST00000055758 AW011738F6S7Q2 159 aa9.87□□□□□ -0.83
Ubr3-201ENSMUST00000055758 Lama1P19137 3084 aa9.87□□□□□ -0.83
Ubr3-201ENSMUST00000055758 Cypt14J3QPF7 87 aa9.87□□□□□ -0.83
Ubr3-201ENSMUST00000055758 Usp34Q6ZQ93 3582 aa9.87□□□□□ -0.83
Ubr3-201ENSMUST00000055758 Odf3bQ5M8M2 238 aa9.85□□□□□ -0.83
Ubr3-201ENSMUST00000055758 Map1aQ9QYR6 2776 aa9.84□□□□□ -0.83
Ubr3-201ENSMUST00000055758 Gm3646F6S692 53 aa9.84□□□□□ -0.83
Ubr3-201ENSMUST00000055758 Gm3233E9Q2H5 230 aa9.84□□□□□ -0.83
Ubr3-201ENSMUST00000055758 FlnaQ8BTM8 2647 aaKnown RBP9.82□□□□□ -0.84
Ubr3-201ENSMUST00000055758 Gm10320E9PW43 113 aa9.81□□□□□ -0.84
Ubr3-201ENSMUST00000055758 Vps13aQ5H8C4 3166 aa9.78□□□□□ -0.84
Ubr3-201ENSMUST00000055758 Gm10382Q3V0T5 144 aa9.78□□□□□ -0.84
Ubr3-201ENSMUST00000055758 Zfhx3Q61329 3726 aa9.78□□□□□ -0.84
Ubr3-201ENSMUST00000055758 Krtap15-1Q9QZU5 150 aa9.78□□□□□ -0.84
Ubr3-201ENSMUST00000055758 Cfap54Q8C6S9 3106 aa9.76□□□□□ -0.85
Ubr3-201ENSMUST00000055758 Rpl37Q9D823 97 aa9.75□□□□□ -0.85
Ubr3-201ENSMUST00000055758 Cdh23Q99PF4 3354 aa9.73□□□□□ -0.85
Ubr3-201ENSMUST00000055758 OxtP35454 125 aa9.72□□□□□ -0.85
Ubr3-201ENSMUST00000055758 ApcQ61315 2845 aa9.71□□□□□ -0.86
Ubr3-201ENSMUST00000055758 AtmQ62388 3066 aa9.7□□□□□ -0.86
Ubr3-201ENSMUST00000055758 Frem2Q6NVD0 3160 aa9.69□□□□□ -0.86
Ubr3-201ENSMUST00000055758 KalrnA2CG49 2964 aa9.68□□□□□ -0.86
Ubr3-201ENSMUST00000055758 Gm37013Q8K491 104 aa9.67□□□□□ -0.86
Ubr3-201ENSMUST00000055758 NbdyA0A0N4SUI7 68 aa9.67□□□□□ -0.86
Ubr3-201ENSMUST00000055758 Dmxl2Q8BPN8 3032 aa9.65□□□□□ -0.86
Ubr3-201ENSMUST00000055758 FlnbQ80X90 2602 aaKnown RBP9.65□□□□□ -0.86
Ubr3-201ENSMUST00000055758 Chd6A3KFM7 2711 aa9.65□□□□□ -0.87
Ubr3-201ENSMUST00000055758 Gm7138L7N2C3 230 aa9.64□□□□□ -0.87
Ubr3-201ENSMUST00000055758 Gm3238W4VSP7 230 aa9.64□□□□□ -0.87
Ubr3-201ENSMUST00000055758 FryE9Q8I9 3020 aa9.64□□□□□ -0.87
Ubr3-201ENSMUST00000055758 Gm19426M0QWC7 77 aa9.63□□□□□ -0.87
Ubr3-201ENSMUST00000055758 Igsf10Q3V1M1 2594 aa9.61□□□□□ -0.87
Ubr3-201ENSMUST00000055758 Dmxl1Q6PNC0 3013 aa9.61□□□□□ -0.87
Ubr3-201ENSMUST00000055758 1700042G07RikB1AUF7 90 aa9.6□□□□□ -0.87
Ubr3-201ENSMUST00000055758 HttP42859 3119 aa9.59□□□□□ -0.87
Ubr3-201ENSMUST00000055758 Gm9508A0A1W2P7W0 230 aa9.58□□□□□ -0.88
Ubr3-201ENSMUST00000055758 Ndufaf8A2AMZ4 74 aa9.57□□□□□ -0.88
Ubr3-201ENSMUST00000055758 Gm10065F6TJM2 114 aa9.56□□□□□ -0.88
Ubr3-201ENSMUST00000055758 A730071L15RikQ8C4X0 137 aa9.54□□□□□ -0.88
Ubr3-201ENSMUST00000055758 Gm7137J3QMW1 236 aa9.54□□□□□ -0.88
Ubr3-201ENSMUST00000055758 Gm10139O88245 57 aa9.53□□□□□ -0.88
Ubr3-201ENSMUST00000055758 Brca2P97929 3329 aa9.52□□□□□ -0.89
Ubr3-201ENSMUST00000055758 Gm9112A2AI92 75 aa9.51□□□□□ -0.89
Ubr3-201ENSMUST00000055758 Sec61bQ9CQS8 96 aaKnown RBP9.5□□□□□ -0.89
Ubr3-201ENSMUST00000055758 Myo15bI7HPW8 3033 aa9.49□□□□□ -0.89
Ubr3-201ENSMUST00000055758 Gm7173A0A0G2JEB6 3132 aa9.49□□□□□ -0.89
Ubr3-201ENSMUST00000055758 4933415A04RikQ9D443 101 aa9.48□□□□□ -0.89
Ubr3-201ENSMUST00000055758 BC029722A0A0N4SW31 51 aa9.47□□□□□ -0.89
Ubr3-201ENSMUST00000055758 Col12a1Q60847 3120 aa9.46□□□□□ -0.89
Ubr3-201ENSMUST00000055758 Wdfy4E9Q2M9 3149 aa9.45□□□□□ -0.9
Ubr3-201ENSMUST00000055758 2310050C09RikG5E8Z3 280 aa9.44□□□□□ -0.9
Ubr3-201ENSMUST00000055758 Tep1P97499 2629 aa9.43□□□□□ -0.9
Ubr3-201ENSMUST00000055758 Ubr5Q80TP3 2792 aa9.43□□□□□ -0.9
Ubr3-201ENSMUST00000055758 Szt2A2A9C3 3431 aa9.4□□□□□ -0.9
Ubr3-201ENSMUST00000055758 Utp20Q5XG71 2788 aaKnown RBP9.4□□□□□ -0.9
Ubr3-201ENSMUST00000055758 Mast4Q811L6 2618 aa9.4□□□□□ -0.91
Ubr3-201ENSMUST00000055758 Lelp1Q9DAE3 120 aa9.39□□□□□ -0.91
Ubr3-201ENSMUST00000055758 Gm16253D3Z167 63 aa9.37□□□□□ -0.91
Ubr3-201ENSMUST00000055758 Sprr1aQ62266 144 aa9.35□□□□□ -0.91
Ubr3-201ENSMUST00000055758 Col6a3E9PWQ3 3284 aa9.35□□□□□ -0.91
Ubr3-201ENSMUST00000055758 Stab2Q8R4U0 2559 aa9.34□□□□□ -0.91
Ubr3-201ENSMUST00000055758 Dchs2A0A0A6YW72 3346 aa9.32□□□□□ -0.92
Ubr3-201ENSMUST00000055758 Chd7A2AJK6 2986 aaKnown RBP9.31□□□□□ -0.92
Ubr3-201ENSMUST00000055758 Itpr3P70227 2670 aa9.31□□□□□ -0.92
Ubr3-201ENSMUST00000055758 Akap9Q70FJ1 3797 aa9.31□□□□□ -0.92
Ubr3-201ENSMUST00000055758 FrylF8VQ05 3007 aa9.29□□□□□ -0.92
Ubr3-201ENSMUST00000055758 Rev3lQ61493 3122 aa9.27□□□□□ -0.93
Ubr3-201ENSMUST00000055758 Itpr2Q9Z329 2701 aa9.27□□□□□ -0.93
Ubr3-201ENSMUST00000055758 SpegQ62407 3262 aa9.26□□□□□ -0.93
Ubr3-201ENSMUST00000055758 Myo15aQ9QZZ4 3511 aa9.25□□□□□ -0.93
Ubr3-201ENSMUST00000055758 Pkd1l1Q8R526 2615 aa9.25□□□□□ -0.93
Ubr3-201ENSMUST00000055758 MgaA2AWL7 3003 aaKnown RBP9.25□□□□□ -0.93
Ubr3-201ENSMUST00000055758 Gm17349F7BGH6 99 aa9.23□□□□□ -0.93
Ubr3-201ENSMUST00000055758 Cox6b2Q80ZN9 88 aa9.21□□□□□ -0.93
Ubr3-201ENSMUST00000055758 Nbeal2Q6ZQA0 2742 aa9.21□□□□□ -0.94
Ubr3-201ENSMUST00000055758 SmcpP15265 143 aa9.2□□□□□ -0.94
Ubr3-201ENSMUST00000055758 Gm5767A0A0J9YTU8 78 aa9.19□□□□□ -0.94
Ubr3-201ENSMUST00000055758 Fbn2Q61555 2907 aa9.19□□□□□ -0.94
Ubr3-201ENSMUST00000055758 AspmQ8CJ27 3122 aa9.18□□□□□ -0.94
Ubr3-201ENSMUST00000055758 Chd9Q8BYH8 2885 aa9.17□□□□□ -0.94
Ubr3-201ENSMUST00000055758 Lrrc37aB1AWG4 3215 aa9.15□□□□□ -0.94
Ubr3-201ENSMUST00000055758 VcanQ62059 3357 aa9.15□□□□□ -0.94
Ubr3-201ENSMUST00000055758 Krtap13O88375 197 aa9.14□□□□□ -0.95
Ubr3-201ENSMUST00000055758 Trank1Q8BV79 2999 aa9.14□□□□□ -0.95
Ubr3-201ENSMUST00000055758 Tnrc18Q80WC3 2878 aa9.14□□□□□ -0.95
Ubr3-201ENSMUST00000055758 Zzef1Q5SSH7 2924 aa9.14□□□□□ -0.95
Ubr3-201ENSMUST00000055758 Tnp1P10856 55 aa9.13□□□□□ -0.95
Ubr3-201ENSMUST00000055758 Wdfy3Q6VNB8 3508 aa9.13□□□□□ -0.95
Ubr3-201ENSMUST00000055758 Celsr1O35161 3034 aa9.12□□□□□ -0.95
Ubr3-201ENSMUST00000055758 Krtap29-1A2A5X4 342 aa9.1□□□□□ -0.95
Ubr3-201ENSMUST00000055758 Tex15F8VPN2 2785 aa9.1□□□□□ -0.95
Ubr3-201ENSMUST00000055758 Gm36176A0A1W2P8D5 158 aa9.07□□□□□ -0.96
Ubr3-201ENSMUST00000055758 Gm21887J3QQ04 176 aa9.06□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 47.7 ms