RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Dmxl1Q6PNC0 3013 aa10.92□□□□□ -0.66
Usp48-201ENSMUST00000055131 Fbn2Q61555 2907 aa10.92□□□□□ -0.66
Usp48-201ENSMUST00000055131 Gm9195A0A140LHT4 2805 aa10.92□□□□□ -0.66
Usp48-201ENSMUST00000055131 Gm10320E9PW43 113 aa10.91□□□□□ -0.66
Usp48-201ENSMUST00000055131 Vps13aQ5H8C4 3166 aa10.9□□□□□ -0.66
Usp48-201ENSMUST00000055131 Pla2g10Q9QXX3 151 aa10.9□□□□□ -0.66
Usp48-201ENSMUST00000055131 Akap13E9Q394 2776 aa10.9□□□□□ -0.66
Usp48-201ENSMUST00000055131 NbdyA0A0N4SUI7 68 aa10.89□□□□□ -0.67
Usp48-201ENSMUST00000055131 Gm20538F6Z9R1 75 aa10.89□□□□□ -0.67
Usp48-201ENSMUST00000055131 6030445D17RikE9Q8F9 148 aa10.89□□□□□ -0.67
Usp48-201ENSMUST00000055131 Prrc2cQ3TLH4 2846 aaKnown RBP10.88□□□□□ -0.67
Usp48-201ENSMUST00000055131 Stab1Q8R4Y4 2571 aa10.88□□□□□ -0.67
Usp48-201ENSMUST00000055131 Gm3880A0A1B0GSB3 72 aa10.87□□□□□ -0.67
Usp48-201ENSMUST00000055131 Szt2A2A9C3 3431 aa10.86□□□□□ -0.67
Usp48-201ENSMUST00000055131 CriptO70333 101 aa10.85□□□□□ -0.67
Usp48-201ENSMUST00000055131 Fn1P11276 2477 aaKnown RBP10.84□□□□□ -0.67
Usp48-201ENSMUST00000055131 Ash1lQ99MY8 2958 aa10.83□□□□□ -0.68
Usp48-201ENSMUST00000055131 Dmbt1Q60997 2085 aa10.82□□□□□ -0.68
Usp48-201ENSMUST00000055131 Notch1Q01705 2531 aa10.82□□□□□ -0.68
Usp48-201ENSMUST00000055131 Mast4Q811L6 2618 aa10.82□□□□□ -0.68
Usp48-201ENSMUST00000055131 Gm36176A0A1W2P8D5 158 aa10.81□□□□□ -0.68
Usp48-201ENSMUST00000055131 Ranbp2Q9ERU9 3053 aaKnown RBP10.81□□□□□ -0.68
Usp48-201ENSMUST00000055131 Gm10065F6TJM2 114 aa10.81□□□□□ -0.68
Usp48-201ENSMUST00000055131 Gm9821Q8K076 103 aa10.8□□□□□ -0.68
Usp48-201ENSMUST00000055131 Gm4491E0CX42 125 aa10.79□□□□□ -0.68
Usp48-201ENSMUST00000055131 Cfap54Q8C6S9 3106 aa10.78□□□□□ -0.68
Usp48-201ENSMUST00000055131 Gm9508A0A1W2P7W0 230 aa10.76□□□□□ -0.69
Usp48-201ENSMUST00000055131 Gm9955Q8CEJ8 102 aa10.75□□□□□ -0.69
Usp48-201ENSMUST00000055131 Ubr5Q80TP3 2792 aa10.73□□□□□ -0.69
Usp48-201ENSMUST00000055131 AspmQ8CJ27 3122 aa10.71□□□□□ -0.69
Usp48-201ENSMUST00000055131 Gm11565A2A4M7 156 aa10.71□□□□□ -0.69
Usp48-201ENSMUST00000055131 Spink7Q6IE32 76 aa10.71□□□□□ -0.69
Usp48-201ENSMUST00000055131 Cystm1Q8K353 104 aa10.71□□□□□ -0.69
Usp48-201ENSMUST00000055131 Itpr3P70227 2670 aa10.7□□□□□ -0.7
Usp48-201ENSMUST00000055131 Gm10139O88245 57 aa10.69□□□□□ -0.7
Usp48-201ENSMUST00000055131 Igsf10Q3V1M1 2594 aa10.68□□□□□ -0.7
Usp48-201ENSMUST00000055131 Odf3bQ5M8M2 238 aa10.68□□□□□ -0.7
Usp48-201ENSMUST00000055131 Lrrc37aB1AWG4 3215 aa10.68□□□□□ -0.7
Usp48-201ENSMUST00000055131 Map1aQ9QYR6 2776 aa10.67□□□□□ -0.7
Usp48-201ENSMUST00000055131 Unc80Q8BLN6 3261 aa10.65□□□□□ -0.71
Usp48-201ENSMUST00000055131 Gm17349F7BGH6 99 aa10.61□□□□□ -0.71
Usp48-201ENSMUST00000055131 Sprr1aQ62266 144 aa10.61□□□□□ -0.71
Usp48-201ENSMUST00000055131 Krtap15-1Q9QZU5 150 aa10.6□□□□□ -0.71
Usp48-201ENSMUST00000055131 BptfA2A654 3036 aaKnown RBP10.58□□□□□ -0.72
Usp48-201ENSMUST00000055131 HrnrQ8VHD8 2496 aa10.56□□□□□ -0.72
Usp48-201ENSMUST00000055131 NipblQ6KCD5 2798 aaKnown RBP10.55□□□□□ -0.72
Usp48-201ENSMUST00000055131 Nbeal2Q6ZQA0 2742 aa10.54□□□□□ -0.72
Usp48-201ENSMUST00000055131 Gm37013Q8K491 104 aa10.53□□□□□ -0.72
Usp48-201ENSMUST00000055131 Muc2Q80Z19 2680 aa10.53□□□□□ -0.72
Usp48-201ENSMUST00000055131 Celsr1O35161 3034 aa10.51□□□□□ -0.73
Usp48-201ENSMUST00000055131 A730071L15RikQ8C4X0 137 aa10.51□□□□□ -0.73
Usp48-201ENSMUST00000055131 Gm16253D3Z167 63 aa10.46□□□□□ -0.74
Usp48-201ENSMUST00000055131 Col6a3E9PWQ3 3284 aa10.45□□□□□ -0.74
Usp48-201ENSMUST00000055131 Chd6A3KFM7 2711 aa10.44□□□□□ -0.74
Usp48-201ENSMUST00000055131 Celsr3Q91ZI0 3301 aa10.44□□□□□ -0.74
Usp48-201ENSMUST00000055131 FryE9Q8I9 3020 aa10.43□□□□□ -0.74
Usp48-201ENSMUST00000055131 9530053A07RikE9PVG8 2581 aa10.4□□□□□ -0.74
Usp48-201ENSMUST00000055131 Gm3646F6S692 53 aa10.39□□□□□ -0.75
Usp48-201ENSMUST00000055131 Brca2P97929 3329 aa10.38□□□□□ -0.75
Usp48-201ENSMUST00000055131 Pkd1l1Q8R526 2615 aa10.35□□□□□ -0.75
Usp48-201ENSMUST00000055131 Col6a5A6H584 2640 aa10.34□□□□□ -0.75
Usp48-201ENSMUST00000055131 Camk2n1Q6QWF9 78 aa10.34□□□□□ -0.75
Usp48-201ENSMUST00000055131 FrylF8VQ05 3007 aa10.33□□□□□ -0.76
Usp48-201ENSMUST00000055131 Frem2Q6NVD0 3160 aa10.32□□□□□ -0.76
Usp48-201ENSMUST00000055131 Gm9507D3Z5T3 223 aa10.32□□□□□ -0.76
Usp48-201ENSMUST00000055131 Krtap29-1A2A5X4 342 aa10.31□□□□□ -0.76
Usp48-201ENSMUST00000055131 Lama1P19137 3084 aa10.31□□□□□ -0.76
Usp48-201ENSMUST00000055131 Fam229aB2KGE5 128 aa10.31□□□□□ -0.76
Usp48-201ENSMUST00000055131 Hivep1Q03172 2688 aa10.29□□□□□ -0.76
Usp48-201ENSMUST00000055131 Wdfy4E9Q2M9 3149 aa10.29□□□□□ -0.76
Usp48-201ENSMUST00000055131 Tep1P97499 2629 aa10.28□□□□□ -0.76
Usp48-201ENSMUST00000055131 Dchs2A0A0A6YW72 3346 aa10.26□□□□□ -0.77
Usp48-201ENSMUST00000055131 Dmxl2Q8BPN8 3032 aa10.25□□□□□ -0.77
Usp48-201ENSMUST00000055131 NbeaQ9EPN1 2936 aa10.25□□□□□ -0.77
Usp48-201ENSMUST00000055131 Kmt2bO08550 2713 aa10.23□□□□□ -0.77
Usp48-201ENSMUST00000055131 Krtap13O88375 197 aa10.22□□□□□ -0.77
Usp48-201ENSMUST00000055131 VcanQ62059 3357 aa10.21□□□□□ -0.78
Usp48-201ENSMUST00000055131 Adgrg4B7ZCC9 3073 aa10.2□□□□□ -0.78
Usp48-201ENSMUST00000055131 2310050C09RikG5E8Z3 280 aa10.2□□□□□ -0.78
Usp48-201ENSMUST00000055131 Gm5767A0A0J9YTU8 78 aa10.19□□□□□ -0.78
Usp48-201ENSMUST00000055131 Rpl37Q9D823 97 aa10.19□□□□□ -0.78
Usp48-201ENSMUST00000055131 Krtap10-4Q08EG8 221 aa10.17□□□□□ -0.78
Usp48-201ENSMUST00000055131 Sec61bQ9CQS8 96 aaKnown RBP10.17□□□□□ -0.78
Usp48-201ENSMUST00000055131 Utp20Q5XG71 2788 aaKnown RBP10.16□□□□□ -0.78
Usp48-201ENSMUST00000055131 Romo1P60603 79 aa10.16□□□□□ -0.78
Usp48-201ENSMUST00000055131 Stab2Q8R4U0 2559 aa10.16□□□□□ -0.78
Usp48-201ENSMUST00000055131 Igfn1Q3KNY0 2849 aa10.13□□□□□ -0.79
Usp48-201ENSMUST00000055131 Itpr2Q9Z329 2701 aa10.09□□□□□ -0.79
Usp48-201ENSMUST00000055131 4933415A04RikQ9D443 101 aa10.07□□□□□ -0.8
Usp48-201ENSMUST00000055131 BC029722A0A0N4SW31 51 aa10.06□□□□□ -0.8
Usp48-201ENSMUST00000055131 Gm10382Q3V0T5 144 aa10.05□□□□□ -0.8
Usp48-201ENSMUST00000055131 Gm19426M0QWC7 77 aa10.04□□□□□ -0.8
Usp48-201ENSMUST00000055131 Dchs1E9PVD3 3291 aa10.03□□□□□ -0.8
Usp48-201ENSMUST00000055131 Krtap10-10A0A1W2P7T6 217 aa10.03□□□□□ -0.8
Usp48-201ENSMUST00000055131 Krtap14O08640 167 aa10.02□□□□□ -0.81
Usp48-201ENSMUST00000055131 1700042G07RikB1AUF7 90 aa9.99□□□□□ -0.81
Usp48-201ENSMUST00000055131 Gm2310J3QNJ2 377 aa9.99□□□□□ -0.81
Usp48-201ENSMUST00000055131 Tex15F8VPN2 2785 aa9.98□□□□□ -0.81
Usp48-201ENSMUST00000055131 DspE9Q557 2883 aaKnown RBP9.97□□□□□ -0.81
Usp48-201ENSMUST00000055131 2310061N02RikQ9D6S9 174 aa9.95□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 41 ms