RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Sprr1aQ62266 144 aa9.46□□□□□ -0.9
Ushbp1-201ENSMUST00000049184 Prol1E9PYQ4 312 aa9.45□□□□□ -0.9
Ushbp1-201ENSMUST00000049184 Reg3aO09037 175 aa9.45□□□□□ -0.9
Ushbp1-201ENSMUST00000049184 1700074P13RikQ9D9G7 251 aa9.45□□□□□ -0.9
Ushbp1-201ENSMUST00000049184 Phxr4P15974 95 aa9.44□□□□□ -0.9
Ushbp1-201ENSMUST00000049184 Gm16485Q8C4B7 115 aa9.43□□□□□ -0.9
Ushbp1-201ENSMUST00000049184 Tex15F8VPN2 2785 aa9.42□□□□□ -0.9
Ushbp1-201ENSMUST00000049184 Zcchc13Q9D548 170 aa9.42□□□□□ -0.9
Ushbp1-201ENSMUST00000049184 U90926O08546 118 aa9.4□□□□□ -0.91
Ushbp1-201ENSMUST00000049184 B9d2Q3UK10 175 aa9.39□□□□□ -0.91
Ushbp1-201ENSMUST00000049184 Myo18bE9PV66 2605 aa9.39□□□□□ -0.91
Ushbp1-201ENSMUST00000049184 Rpl37aP61514 92 aa9.37□□□□□ -0.91
Ushbp1-201ENSMUST00000049184 Gm28230A0A0A0MQ91 144 aa9.36□□□□□ -0.91
Ushbp1-201ENSMUST00000049184 Fam104aA2A6P4 185 aa9.36□□□□□ -0.91
Ushbp1-201ENSMUST00000049184 Wfdc13Q5DQQ6 81 aa9.36□□□□□ -0.91
Ushbp1-201ENSMUST00000049184 Odf3bQ5M8M2 238 aa9.35□□□□□ -0.91
Ushbp1-201ENSMUST00000049184 Chtf8P0CG14 533 aa9.34□□□□□ -0.91
Ushbp1-201ENSMUST00000049184 ApcQ61315 2845 aa9.33□□□□□ -0.92
Ushbp1-201ENSMUST00000049184 Chchd10Q7TNL9 138 aa9.32□□□□□ -0.92
Ushbp1-201ENSMUST00000049184 PolqQ8CGS6 2544 aa9.3□□□□□ -0.92
Ushbp1-201ENSMUST00000049184 Gm10139O88245 57 aa9.27□□□□□ -0.92
Ushbp1-201ENSMUST00000049184 Nbeal2Q6ZQA0 2742 aa9.27□□□□□ -0.93
Ushbp1-201ENSMUST00000049184 Gm10267M0QWD8 85 aa9.27□□□□□ -0.93
Ushbp1-201ENSMUST00000049184 Ube2aQ9Z255 152 aa9.27□□□□□ -0.93
Ushbp1-201ENSMUST00000049184 Gm2310J3QNJ2 377 aa9.26□□□□□ -0.93
Ushbp1-201ENSMUST00000049184 9230102O04RikA2ASX7 82 aa9.25□□□□□ -0.93
Ushbp1-201ENSMUST00000049184 Gm20604F8WIA3 75 aa9.25□□□□□ -0.93
Ushbp1-201ENSMUST00000049184 Igkv3-7A0A0G2JE31 119 aa9.22□□□□□ -0.93
Ushbp1-201ENSMUST00000049184 Gm7138L7N2C3 230 aa9.22□□□□□ -0.93
Ushbp1-201ENSMUST00000049184 Gm3238W4VSP7 230 aa9.22□□□□□ -0.93
Ushbp1-201ENSMUST00000049184 Gm10160F6Y577 67 aa9.21□□□□□ -0.93
Ushbp1-201ENSMUST00000049184 Fbn1Q61554 2873 aaKnown RBP9.2□□□□□ -0.94
Ushbp1-201ENSMUST00000049184 PtprqP0C5E4 2300 aa9.19□□□□□ -0.94
Ushbp1-201ENSMUST00000049184 CicQ924A2 2510 aa9.19□□□□□ -0.94
Ushbp1-201ENSMUST00000049184 Kmt2aP55200 3966 aa9.19□□□□□ -0.94
Ushbp1-201ENSMUST00000049184 Gm10643Q3URG9 111 aa9.19□□□□□ -0.94
Ushbp1-201ENSMUST00000049184 SptssbQ925E8 76 aa9.19□□□□□ -0.94
Ushbp1-201ENSMUST00000049184 Tenm4Q3UHK6 2771 aa9.17□□□□□ -0.94
Ushbp1-201ENSMUST00000049184 SycnQ8VCK7 134 aa9.17□□□□□ -0.94
Ushbp1-201ENSMUST00000049184 Tenm1Q9WTS4 2731 aa9.17□□□□□ -0.94
Ushbp1-201ENSMUST00000049184 1700042G07RikB1AUF7 90 aa9.15□□□□□ -0.94
Ushbp1-201ENSMUST00000049184 Gm20661K7N787 53 aa9.15□□□□□ -0.94
Ushbp1-201ENSMUST00000049184 Sslp1Q3UN54 99 aa9.15□□□□□ -0.94
Ushbp1-201ENSMUST00000049184 Wfdc10Q3V2J9 124 aa9.15□□□□□ -0.94
Ushbp1-201ENSMUST00000049184 Gm26620Q9CY65 116 aa9.15□□□□□ -0.94
Ushbp1-201ENSMUST00000049184 Defb38Q7TNV7 63 aa9.14□□□□□ -0.95
Ushbp1-201ENSMUST00000049184 Igkv3-3A0A140T8Q0 119 aa9.14□□□□□ -0.95
Ushbp1-201ENSMUST00000049184 TgO08710 2766 aa9.13□□□□□ -0.95
Ushbp1-201ENSMUST00000049184 Phf5aP83870 110 aaKnown RBP9.13□□□□□ -0.95
Ushbp1-201ENSMUST00000049184 Notch2O35516 2470 aa9.13□□□□□ -0.95
Ushbp1-201ENSMUST00000049184 Gm3646F6S692 53 aa9.12□□□□□ -0.95
Ushbp1-201ENSMUST00000049184 Ccdc179J3QM76 67 aa9.12□□□□□ -0.95
Ushbp1-201ENSMUST00000049184 Dnah3Q8BW94 4083 aa9.11□□□□□ -0.95
Ushbp1-201ENSMUST00000049184 Csmd3Q80T79 3707 aa9.11□□□□□ -0.95
Ushbp1-201ENSMUST00000049184 FlnbQ80X90 2602 aaKnown RBP9.1□□□□□ -0.95
Ushbp1-201ENSMUST00000049184 Ndufb1P0DN34 57 aa9.1□□□□□ -0.95
Ushbp1-201ENSMUST00000049184 Igkv3-5A0A140T8M6 119 aa9.07□□□□□ -0.96
Ushbp1-201ENSMUST00000049184 Itpr2Q9Z329 2701 aa9.07□□□□□ -0.96
Ushbp1-201ENSMUST00000049184 AtrQ9JKK8 2635 aa9.06□□□□□ -0.96
Ushbp1-201ENSMUST00000049184 HrnrQ8VHD8 2496 aa9.04□□□□□ -0.96
Ushbp1-201ENSMUST00000049184 Dnah1E9Q8T7 4250 aa9.04□□□□□ -0.96
Ushbp1-201ENSMUST00000049184 9530053A07RikE9PVG8 2581 aa9.04□□□□□ -0.96
Ushbp1-201ENSMUST00000049184 Gm10837Q3UTT8 145 aa9.04□□□□□ -0.96
Ushbp1-201ENSMUST00000049184 Notch1Q01705 2531 aa9.03□□□□□ -0.96
Ushbp1-201ENSMUST00000049184 Dnah7bL7N1Y0 4068 aa9.01□□□□□ -0.97
Ushbp1-201ENSMUST00000049184 Spata3Q9D9T6 193 aa9□□□□□ -0.97
Ushbp1-201ENSMUST00000049184 Gm27235Q3UW50 83 aa8.99□□□□□ -0.97
Ushbp1-201ENSMUST00000049184 Defb9Q8R2I6 67 aa8.98□□□□□ -0.97
Ushbp1-201ENSMUST00000049184 6030445D17RikE9Q8F9 148 aa8.96□□□□□ -0.97
Ushbp1-201ENSMUST00000049184 Q8K1L6 76 aa8.96□□□□□ -0.98
Ushbp1-201ENSMUST00000049184 2310061N02RikQ9D6S9 174 aa8.96□□□□□ -0.98
Ushbp1-201ENSMUST00000049184 Plac8Q9JI48 112 aa8.96□□□□□ -0.98
Ushbp1-201ENSMUST00000049184 Col6a5A6H584 2640 aa8.95□□□□□ -0.98
Ushbp1-201ENSMUST00000049184 Nsd1O88491 2588 aaKnown RBP8.95□□□□□ -0.98
Ushbp1-201ENSMUST00000049184 Gm7137J3QMW1 236 aa8.95□□□□□ -0.98
Ushbp1-201ENSMUST00000049184 Hivep1Q03172 2688 aa8.94□□□□□ -0.98
Ushbp1-201ENSMUST00000049184 Gm36176A0A1W2P8D5 158 aa8.93□□□□□ -0.98
Ushbp1-201ENSMUST00000049184 Limd2Q8BGB5 128 aa8.93□□□□□ -0.98
Ushbp1-201ENSMUST00000049184 Tenm2Q9WTS5 2764 aa8.92□□□□□ -0.98
Ushbp1-201ENSMUST00000049184 Gm10642Q3TWM1 71 aa8.92□□□□□ -0.98
Ushbp1-201ENSMUST00000049184 Fn1P11276 2477 aaKnown RBP8.92□□□□□ -0.98
Ushbp1-201ENSMUST00000049184 Gm21798J3QNU5 87 aa8.91□□□□□ -0.98
Ushbp1-201ENSMUST00000049184 Dnah17Q69Z23 4481 aa8.9□□□□□ -0.98
Ushbp1-201ENSMUST00000049184 1700012A03RikQ9DAF1 130 aa8.9□□□□□ -0.98
Ushbp1-201ENSMUST00000049184 Uqcr11Q9CPX8 56 aa8.9□□□□□ -0.99
Ushbp1-201ENSMUST00000049184 Stab1Q8R4Y4 2571 aa8.89□□□□□ -0.99
Ushbp1-201ENSMUST00000049184 Srrm2Q8BTI8 2703 aaKnown RBP8.88□□□□□ -0.99
Ushbp1-201ENSMUST00000049184 Dnah11E9Q7N9 4488 aa8.88□□□□□ -0.99
Ushbp1-201ENSMUST00000049184 Dnah14A0A140LIJ4 4489 aa8.86□□□□□ -0.99
Ushbp1-201ENSMUST00000049184 AW011738F6S7Q2 159 aa8.84□□□□□ -0.99
Ushbp1-201ENSMUST00000049184 Ndufs5Q99LY9 106 aa8.84□□□□□ -0.99
Ushbp1-201ENSMUST00000049184 Gm9508A0A1W2P7W0 230 aa8.83□□□□□ -1
Ushbp1-201ENSMUST00000049184 Gm16253D3Z167 63 aa8.83□□□□□ -1
Ushbp1-201ENSMUST00000049184 Nupr2Q497P3 102 aa8.83□□□□□ -1
Ushbp1-201ENSMUST00000049184 Cypt14J3QPF7 87 aa8.81□□□□□ -1
Ushbp1-201ENSMUST00000049184 Dnah10D3YYQ8 4591 aa8.81□□□□□ -1
Ushbp1-201ENSMUST00000049184 Megf8P60882 2789 aa8.81□□□□□ -1
Ushbp1-201ENSMUST00000049184 VwfQ8CIZ8 2813 aa8.8□□□□□ -1
Ushbp1-201ENSMUST00000049184 Anapc11Q9CPX9 84 aa8.8□□□□□ -1
Ushbp1-201ENSMUST00000049184 Znf706Q9D115 76 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 48.9 ms