RNA–Protein interactions for RNA: ENSMUST00000045312.5

Smc1a-201, Transcript of Structural maintenance of chromosomes protein 1A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc1a, Length 4,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1a-201ENSMUST00000045312 4933415A04RikQ9D443 101 aa4.55□□□□□ -1.68
Smc1a-201ENSMUST00000045312 Dmxl1Q6PNC0 3013 aa4.55□□□□□ -1.68
Smc1a-201ENSMUST00000045312 Gpr15lA0A0B4J1N3 78 aa4.55□□□□□ -1.68
Smc1a-201ENSMUST00000045312 A730071L15RikQ8C4X0 137 aa4.55□□□□□ -1.68
Smc1a-201ENSMUST00000045312 Gm27235Q3UW50 83 aa4.55□□□□□ -1.68
Smc1a-201ENSMUST00000045312 Rnase13Q5GAM7 153 aa4.54□□□□□ -1.68
Smc1a-201ENSMUST00000045312 Chd6A3KFM7 2711 aa4.54□□□□□ -1.68
Smc1a-201ENSMUST00000045312 Vps13aQ5H8C4 3166 aa4.54□□□□□ -1.68
Smc1a-201ENSMUST00000045312 RetnlbQ99P86 105 aa4.53□□□□□ -1.68
Smc1a-201ENSMUST00000045312 Unc80Q8BLN6 3261 aa4.53□□□□□ -1.68
Smc1a-201ENSMUST00000045312 AtmQ62388 3066 aa4.53□□□□□ -1.68
Smc1a-201ENSMUST00000045312 Fbn2Q61555 2907 aa4.52□□□□□ -1.69
Smc1a-201ENSMUST00000045312 Gm3880A0A1B0GSB3 72 aa4.52□□□□□ -1.69
Smc1a-201ENSMUST00000045312 Gm21798J3QNU5 87 aa4.52□□□□□ -1.69
Smc1a-201ENSMUST00000045312 Pla2g10Q9QXX3 151 aa4.52□□□□□ -1.69
Smc1a-201ENSMUST00000045312 AW011738F6S7Q2 159 aa4.52□□□□□ -1.69
Smc1a-201ENSMUST00000045312 DspE9Q557 2883 aaKnown RBP4.51□□□□□ -1.69
Smc1a-201ENSMUST00000045312 KalrnA2CG49 2964 aa4.51□□□□□ -1.69
Smc1a-201ENSMUST00000045312 Lelp1Q9DAE3 120 aa4.51□□□□□ -1.69
Smc1a-201ENSMUST00000045312 Fam104aA2A6P4 185 aa4.5□□□□□ -1.69
Smc1a-201ENSMUST00000045312 2310034C09RikQ9D746 214 aa4.5□□□□□ -1.69
Smc1a-201ENSMUST00000045312 Wdfy3Q6VNB8 3508 aa4.5□□□□□ -1.69
Smc1a-201ENSMUST00000045312 Anapc11Q9CPX9 84 aa4.49□□□□□ -1.69
Smc1a-201ENSMUST00000045312 MgaA2AWL7 3003 aaKnown RBP4.49□□□□□ -1.69
Smc1a-201ENSMUST00000045312 Ubr5Q80TP3 2792 aa4.48□□□□□ -1.69
Smc1a-201ENSMUST00000045312 Cdh23Q99PF4 3354 aa4.48□□□□□ -1.69
Smc1a-201ENSMUST00000045312 Mast4Q811L6 2618 aa4.48□□□□□ -1.69
Smc1a-201ENSMUST00000045312 6030445D17RikE9Q8F9 148 aa4.47□□□□□ -1.69
Smc1a-201ENSMUST00000045312 Zfhx3Q61329 3726 aa4.47□□□□□ -1.69
Smc1a-201ENSMUST00000045312 CriptO70333 101 aa4.45□□□□□ -1.7
Smc1a-201ENSMUST00000045312 Stab1Q8R4Y4 2571 aa4.45□□□□□ -1.7
Smc1a-201ENSMUST00000045312 Tep1P97499 2629 aa4.45□□□□□ -1.7
Smc1a-201ENSMUST00000045312 Defb9Q8R2I6 67 aa4.44□□□□□ -1.7
Smc1a-201ENSMUST00000045312 Cypt14J3QPF7 87 aa4.44□□□□□ -1.7
Smc1a-201ENSMUST00000045312 Gm20538F6Z9R1 75 aa4.43□□□□□ -1.7
Smc1a-201ENSMUST00000045312 Gm37013Q8K491 104 aa4.43□□□□□ -1.7
Smc1a-201ENSMUST00000045312 BptfA2A654 3036 aaKnown RBP4.43□□□□□ -1.7
Smc1a-201ENSMUST00000045312 Gm3233E9Q2H5 230 aa4.43□□□□□ -1.7
Smc1a-201ENSMUST00000045312 Tex15F8VPN2 2785 aa4.43□□□□□ -1.7
Smc1a-201ENSMUST00000045312 FryE9Q8I9 3020 aa4.42□□□□□ -1.7
Smc1a-201ENSMUST00000045312 Itpr3P70227 2670 aa4.41□□□□□ -1.7
Smc1a-201ENSMUST00000045312 Muc2Q80Z19 2680 aa4.41□□□□□ -1.7
Smc1a-201ENSMUST00000045312 FrylF8VQ05 3007 aa4.39□□□□□ -1.71
Smc1a-201ENSMUST00000045312 AspmQ8CJ27 3122 aa4.39□□□□□ -1.71
Smc1a-201ENSMUST00000045312 Igfn1Q3KNY0 2849 aa4.39□□□□□ -1.71
Smc1a-201ENSMUST00000045312 Odf3bQ5M8M2 238 aa4.38□□□□□ -1.71
Smc1a-201ENSMUST00000045312 Celsr3Q91ZI0 3301 aa4.38□□□□□ -1.71
Smc1a-201ENSMUST00000045312 Celsr1O35161 3034 aa4.37□□□□□ -1.71
Smc1a-201ENSMUST00000045312 9530053A07RikE9PVG8 2581 aa4.35□□□□□ -1.71
Smc1a-201ENSMUST00000045312 Dchs2A0A0A6YW72 3346 aa4.35□□□□□ -1.71
Smc1a-201ENSMUST00000045312 Szt2A2A9C3 3431 aa4.35□□□□□ -1.71
Smc1a-201ENSMUST00000045312 Igsf10Q3V1M1 2594 aa4.35□□□□□ -1.71
Smc1a-201ENSMUST00000045312 Plac8Q9JI48 112 aa4.34□□□□□ -1.71
Smc1a-201ENSMUST00000045312 Brca2P97929 3329 aa4.33□□□□□ -1.72
Smc1a-201ENSMUST00000045312 DmdP11531 3678 aa4.33□□□□□ -1.72
Smc1a-201ENSMUST00000045312 Nbeal2Q6ZQA0 2742 aa4.33□□□□□ -1.72
Smc1a-201ENSMUST00000045312 Gm9955Q8CEJ8 102 aa4.33□□□□□ -1.72
Smc1a-201ENSMUST00000045312 OxtP35454 125 aa4.32□□□□□ -1.72
Smc1a-201ENSMUST00000045312 Stab2Q8R4U0 2559 aa4.32□□□□□ -1.72
Smc1a-201ENSMUST00000045312 Gm10139O88245 57 aa4.32□□□□□ -1.72
Smc1a-201ENSMUST00000045312 Pkd1l1Q8R526 2615 aa4.31□□□□□ -1.72
Smc1a-201ENSMUST00000045312 Col6a5A6H584 2640 aa4.3□□□□□ -1.72
Smc1a-201ENSMUST00000045312 Lrrc37aB1AWG4 3215 aa4.3□□□□□ -1.72
Smc1a-201ENSMUST00000045312 Gm7138L7N2C3 230 aa4.3□□□□□ -1.72
Smc1a-201ENSMUST00000045312 Gm3238W4VSP7 230 aa4.3□□□□□ -1.72
Smc1a-201ENSMUST00000045312 Myo15aQ9QZZ4 3511 aa4.29□□□□□ -1.72
Smc1a-201ENSMUST00000045312 Wdfy4E9Q2M9 3149 aa4.28□□□□□ -1.72
Smc1a-201ENSMUST00000045312 Gm4491E0CX42 125 aa4.27□□□□□ -1.73
Smc1a-201ENSMUST00000045312 Sprr1aQ62266 144 aa4.27□□□□□ -1.73
Smc1a-201ENSMUST00000045312 Gm9508A0A1W2P7W0 230 aa4.26□□□□□ -1.73
Smc1a-201ENSMUST00000045312 Lama1P19137 3084 aa4.25□□□□□ -1.73
Smc1a-201ENSMUST00000045312 Muc5acE9QAQ8 3455 aa4.25□□□□□ -1.73
Smc1a-201ENSMUST00000045312 NbeaQ9EPN1 2936 aa4.25□□□□□ -1.73
Smc1a-201ENSMUST00000045312 Hivep1Q03172 2688 aa4.25□□□□□ -1.73
Smc1a-201ENSMUST00000045312 Gm10065F6TJM2 114 aa4.25□□□□□ -1.73
Smc1a-201ENSMUST00000045312 ApcQ61315 2845 aa4.24□□□□□ -1.73
Smc1a-201ENSMUST00000045312 Dmxl2Q8BPN8 3032 aa4.24□□□□□ -1.73
Smc1a-201ENSMUST00000045312 Gm7137J3QMW1 236 aa4.24□□□□□ -1.73
Smc1a-201ENSMUST00000045312 Romo1P60603 79 aa4.24□□□□□ -1.73
Smc1a-201ENSMUST00000045312 VcanQ62059 3357 aa4.23□□□□□ -1.73
Smc1a-201ENSMUST00000045312 Gm16253D3Z167 63 aa4.23□□□□□ -1.73
Smc1a-201ENSMUST00000045312 NbdyA0A0N4SUI7 68 aa4.23□□□□□ -1.73
Smc1a-201ENSMUST00000045312 Itpr2Q9Z329 2701 aa4.21□□□□□ -1.73
Smc1a-201ENSMUST00000045312 Trank1Q8BV79 2999 aa4.21□□□□□ -1.74
Smc1a-201ENSMUST00000045312 Rpl37Q9D823 97 aa4.21□□□□□ -1.74
Smc1a-201ENSMUST00000045312 Gm2310J3QNJ2 377 aa4.21□□□□□ -1.74
Smc1a-201ENSMUST00000045312 TgO08710 2766 aa4.21□□□□□ -1.74
Smc1a-201ENSMUST00000045312 Gm10382Q3V0T5 144 aa4.21□□□□□ -1.74
Smc1a-201ENSMUST00000045312 Celsr2Q9R0M0 2920 aa4.2□□□□□ -1.74
Smc1a-201ENSMUST00000045312 FlncQ8VHX6 2726 aaKnown RBP4.2□□□□□ -1.74
Smc1a-201ENSMUST00000045312 Zzef1Q5SSH7 2924 aa4.2□□□□□ -1.74
Smc1a-201ENSMUST00000045312 Adgrg4B7ZCC9 3073 aa4.2□□□□□ -1.74
Smc1a-201ENSMUST00000045312 Gm36176A0A1W2P8D5 158 aa4.18□□□□□ -1.74
Smc1a-201ENSMUST00000045312 Ndufaf8A2AMZ4 74 aa4.18□□□□□ -1.74
Smc1a-201ENSMUST00000045312 Gm17349F7BGH6 99 aa4.18□□□□□ -1.74
Smc1a-201ENSMUST00000045312 Chd9Q8BYH8 2885 aa4.16□□□□□ -1.74
Smc1a-201ENSMUST00000045312 Gm884A2A9H6 3643 aa4.16□□□□□ -1.74
Smc1a-201ENSMUST00000045312 Srrm2Q8BTI8 2703 aaKnown RBP4.15□□□□□ -1.75
Smc1a-201ENSMUST00000045312 Col6a3E9PWQ3 3284 aa4.14□□□□□ -1.75
Smc1a-201ENSMUST00000045312 Akap9Q70FJ1 3797 aa4.13□□□□□ -1.75
Retrieved 100 of 22,080 RNA–protein pairs in 215.4 ms