RNA–Protein interactions for RNA: ENSMUST00000036229.12

Ctdp1-201, Transcript of RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdp1, Length 3,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1-201ENSMUST00000036229 Srsf12Q8C8K3 266 aa9.72□□□□□ -0.85
Ctdp1-201ENSMUST00000036229 OtogO55225 2910 aa9.69□□□□□ -0.86
Ctdp1-201ENSMUST00000036229 Igkv3-4A0A140T8Q4 119 aa9.67□□□□□ -0.86
Ctdp1-201ENSMUST00000036229 Phxr4P15974 95 aa9.67□□□□□ -0.86
Ctdp1-201ENSMUST00000036229 Gm3233E9Q2H5 230 aa9.66□□□□□ -0.86
Ctdp1-201ENSMUST00000036229 Pkd1l1Q8R526 2615 aa9.65□□□□□ -0.86
Ctdp1-201ENSMUST00000036229 Fam168bQ80XQ8 194 aa9.65□□□□□ -0.87
Ctdp1-201ENSMUST00000036229 Gm4707V9GXN5 68 aa9.64□□□□□ -0.87
Ctdp1-201ENSMUST00000036229 Obox2E9PXV9 151 aa9.64□□□□□ -0.87
Ctdp1-201ENSMUST00000036229 Gm43218A0A0G2JGT0 114 aa9.63□□□□□ -0.87
Ctdp1-201ENSMUST00000036229 Sprr1bQ62267 153 aa9.63□□□□□ -0.87
Ctdp1-201ENSMUST00000036229 Pdzd2E9Q1M1 2796 aa9.62□□□□□ -0.87
Ctdp1-201ENSMUST00000036229 Chtf8P0CG14 533 aa9.6□□□□□ -0.87
Ctdp1-201ENSMUST00000036229 Tcl1b5P56845 121 aa9.6□□□□□ -0.87
Ctdp1-201ENSMUST00000036229 Gm7276Q3TYW4 209 aa9.59□□□□□ -0.87
Ctdp1-201ENSMUST00000036229 U90926O08546 118 aa9.58□□□□□ -0.88
Ctdp1-201ENSMUST00000036229 Gm28230A0A0A0MQ91 144 aa9.58□□□□□ -0.88
Ctdp1-201ENSMUST00000036229 4933415A04RikQ9D443 101 aa9.57□□□□□ -0.88
Ctdp1-201ENSMUST00000036229 Gm20661K7N787 53 aa9.57□□□□□ -0.88
Ctdp1-201ENSMUST00000036229 Igkv3-12A0A140T8P0 119 aa9.56□□□□□ -0.88
Ctdp1-201ENSMUST00000036229 Fam104aA2A6P4 185 aa9.56□□□□□ -0.88
Ctdp1-201ENSMUST00000036229 Tenm3Q9WTS6 2715 aa9.56□□□□□ -0.88
Ctdp1-201ENSMUST00000036229 Gm12353A2AGJ4 60 aa9.55□□□□□ -0.88
Ctdp1-201ENSMUST00000036229 Gm10160F6Y577 67 aa9.54□□□□□ -0.88
Ctdp1-201ENSMUST00000036229 Cmc4Q61908 68 aa9.54□□□□□ -0.88
Ctdp1-201ENSMUST00000036229 Gm16181B0V2H2 73 aa9.54□□□□□ -0.88
Ctdp1-201ENSMUST00000036229 Itpr2Q9Z329 2701 aa9.52□□□□□ -0.89
Ctdp1-201ENSMUST00000036229 Igsf10Q3V1M1 2594 aa9.5□□□□□ -0.89
Ctdp1-201ENSMUST00000036229 Igkv3-7A0A0G2JE31 119 aa9.49□□□□□ -0.89
Ctdp1-201ENSMUST00000036229 Snhg11Q4G0K9 87 aa9.49□□□□□ -0.89
Ctdp1-201ENSMUST00000036229 Ndufb1P0DN34 57 aa9.48□□□□□ -0.89
Ctdp1-201ENSMUST00000036229 1700042G07RikB1AUF7 90 aa9.48□□□□□ -0.89
Ctdp1-201ENSMUST00000036229 Zcchc13Q9D548 170 aa9.48□□□□□ -0.89
Ctdp1-201ENSMUST00000036229 Sprr4Q8CGN8 76 aa9.47□□□□□ -0.89
Ctdp1-201ENSMUST00000036229 Gm3646F6S692 53 aa9.47□□□□□ -0.89
Ctdp1-201ENSMUST00000036229 OxtP35454 125 aa9.45□□□□□ -0.9
Ctdp1-201ENSMUST00000036229 Srrm2Q8BTI8 2703 aaKnown RBP9.45□□□□□ -0.9
Ctdp1-201ENSMUST00000036229 Gm16485Q8C4B7 115 aa9.44□□□□□ -0.9
Ctdp1-201ENSMUST00000036229 Gm26620Q9CY65 116 aa9.44□□□□□ -0.9
Ctdp1-201ENSMUST00000036229 TgO08710 2766 aa9.43□□□□□ -0.9
Ctdp1-201ENSMUST00000036229 Dmac1Q9CQ00 111 aa9.42□□□□□ -0.9
Ctdp1-201ENSMUST00000036229 1700012A03RikQ9DAF1 130 aa9.42□□□□□ -0.9
Ctdp1-201ENSMUST00000036229 Igkv3-5A0A140T8M6 119 aa9.41□□□□□ -0.9
Ctdp1-201ENSMUST00000036229 Xirp2Q4U4S6 3784 aa9.41□□□□□ -0.9
Ctdp1-201ENSMUST00000036229 Ighv8-13A0A075B5Y0 101 aa9.4□□□□□ -0.9
Ctdp1-201ENSMUST00000036229 Gm11565A2A4M7 156 aa9.39□□□□□ -0.91
Ctdp1-201ENSMUST00000036229 Fbn1Q61554 2873 aaKnown RBP9.38□□□□□ -0.91
Ctdp1-201ENSMUST00000036229 P84750 121 aa9.38□□□□□ -0.91
Ctdp1-201ENSMUST00000036229 Phxr5P08399 672 aa9.37□□□□□ -0.91
Ctdp1-201ENSMUST00000036229 Wfdc10Q3V2J9 124 aa9.37□□□□□ -0.91
Ctdp1-201ENSMUST00000036229 Defb13Q8R2I4 64 aa9.37□□□□□ -0.91
Ctdp1-201ENSMUST00000036229 Wfdc3Q14AE4 130 aa9.36□□□□□ -0.91
Ctdp1-201ENSMUST00000036229 Stab2Q8R4U0 2559 aa9.36□□□□□ -0.91
Ctdp1-201ENSMUST00000036229 Krtap24-1G3X9A2 248 aa9.35□□□□□ -0.91
Ctdp1-201ENSMUST00000036229 Chchd10Q7TNL9 138 aa9.33□□□□□ -0.92
Ctdp1-201ENSMUST00000036229 Gm9821Q8K076 103 aa9.33□□□□□ -0.92
Ctdp1-201ENSMUST00000036229 Defb1P56386 69 aa9.33□□□□□ -0.92
Ctdp1-201ENSMUST00000036229 Wfdc6bF6ULY1 148 aa9.32□□□□□ -0.92
Ctdp1-201ENSMUST00000036229 9530053A07RikE9PVG8 2581 aa9.32□□□□□ -0.92
Ctdp1-201ENSMUST00000036229 Col7a1Q63870 2944 aa9.3□□□□□ -0.92
Ctdp1-201ENSMUST00000036229 Hspg2Q05793 3707 aaKnown RBP9.29□□□□□ -0.92
Ctdp1-201ENSMUST00000036229 SycnQ8VCK7 134 aa9.29□□□□□ -0.92
Ctdp1-201ENSMUST00000036229 Gm10643Q3URG9 111 aa9.29□□□□□ -0.92
Ctdp1-201ENSMUST00000036229 Gm7137J3QMW1 236 aa9.28□□□□□ -0.92
Ctdp1-201ENSMUST00000036229 Gm7138L7N2C3 230 aa9.27□□□□□ -0.93
Ctdp1-201ENSMUST00000036229 Gm3238W4VSP7 230 aa9.27□□□□□ -0.93
Ctdp1-201ENSMUST00000036229 Psors1c2Q80ZC9 134 aa9.26□□□□□ -0.93
Ctdp1-201ENSMUST00000036229 VwfQ8CIZ8 2813 aa9.25□□□□□ -0.93
Ctdp1-201ENSMUST00000036229 Phf5aP83870 110 aaKnown RBP9.25□□□□□ -0.93
Ctdp1-201ENSMUST00000036229 Gm37013Q8K491 104 aa9.25□□□□□ -0.93
Ctdp1-201ENSMUST00000036229 Gm11627A6PWP4 55 aa9.21□□□□□ -0.93
Ctdp1-201ENSMUST00000036229 Gm9508A0A1W2P7W0 230 aa9.2□□□□□ -0.94
Ctdp1-201ENSMUST00000036229 Ank2Q8C8R3 3898 aa9.17□□□□□ -0.94
Ctdp1-201ENSMUST00000036229 Gm10999F6Q4M4 69 aa9.17□□□□□ -0.94
Ctdp1-201ENSMUST00000036229 Anapc11Q9CPX9 84 aa9.17□□□□□ -0.94
Ctdp1-201ENSMUST00000036229 Gm10642Q3TWM1 71 aa9.17□□□□□ -0.94
Ctdp1-201ENSMUST00000036229 Prol1E9PYQ4 312 aa9.13□□□□□ -0.95
Ctdp1-201ENSMUST00000036229 AplnQ9R0R4 77 aa9.13□□□□□ -0.95
Ctdp1-201ENSMUST00000036229 Gm21798J3QNU5 87 aa9.13□□□□□ -0.95
Ctdp1-201ENSMUST00000036229 Odf3bQ5M8M2 238 aa9.12□□□□□ -0.95
Ctdp1-201ENSMUST00000036229 Wfdc17Q5SSJ1 76 aa9.11□□□□□ -0.95
Ctdp1-201ENSMUST00000036229 Defb39Q70KL3 74 aa9.11□□□□□ -0.95
Ctdp1-201ENSMUST00000036229 Limd2Q8BGB5 128 aa9.11□□□□□ -0.95
Ctdp1-201ENSMUST00000036229 Q8BGJ3 129 aa9.11□□□□□ -0.95
Ctdp1-201ENSMUST00000036229 Gm12216A0A1W2P827 62 aa9.1□□□□□ -0.95
Ctdp1-201ENSMUST00000036229 Tenm1Q9WTS4 2731 aa9.08□□□□□ -0.96
Ctdp1-201ENSMUST00000036229 BsnO88737 3942 aa9.08□□□□□ -0.96
Ctdp1-201ENSMUST00000036229 Csmd3Q80T79 3707 aa9.06□□□□□ -0.96
Ctdp1-201ENSMUST00000036229 6030445D17RikE9Q8F9 148 aa9.02□□□□□ -0.97
Ctdp1-201ENSMUST00000036229 Uqcr11Q9CPX8 56 aa9.02□□□□□ -0.97
Ctdp1-201ENSMUST00000036229 Znf706Q9D115 76 aaKnown RBP9□□□□□ -0.97
Ctdp1-201ENSMUST00000036229 Tenm4Q3UHK6 2771 aa9□□□□□ -0.97
Ctdp1-201ENSMUST00000036229 Nupr2Q497P3 102 aa9□□□□□ -0.97
Ctdp1-201ENSMUST00000036229 CriptO70333 101 aa8.99□□□□□ -0.97
Ctdp1-201ENSMUST00000036229 Defb10Q8R2I8 73 aa8.98□□□□□ -0.97
Ctdp1-201ENSMUST00000036229 Adm2Q7TNK8 150 aa8.97□□□□□ -0.97
Ctdp1-201ENSMUST00000036229 1600014C23RikQ9DAX4 101 aa8.95□□□□□ -0.98
Ctdp1-201ENSMUST00000036229 Defb9Q8R2I6 67 aa8.94□□□□□ -0.98
Ctdp1-201ENSMUST00000036229 Gm36176A0A1W2P8D5 158 aa8.94□□□□□ -0.98
Ctdp1-201ENSMUST00000036229 Sprr1aQ62266 144 aa8.94□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms