RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 SmcpP15265 143 aa7.17□□□□□ -1.26
Rnf40-201ENSMUST00000033088 Igkv8-19A0A0G2JFN8 121 aa7.16□□□□□ -1.26
Rnf40-201ENSMUST00000033088 Igkv3-4A0A140T8Q4 119 aa7.16□□□□□ -1.26
Rnf40-201ENSMUST00000033088 Spata3Q9D9T6 193 aa7.16□□□□□ -1.26
Rnf40-201ENSMUST00000033088 Igkv3-7A0A0G2JE31 119 aa7.15□□□□□ -1.26
Rnf40-201ENSMUST00000033088 Gm12353A2AGJ4 60 aa7.15□□□□□ -1.26
Rnf40-201ENSMUST00000033088 Gm17509Q9CZ61 145 aa7.15□□□□□ -1.26
Rnf40-201ENSMUST00000033088 AI606181Q8C7B9 129 aa7.15□□□□□ -1.27
Rnf40-201ENSMUST00000033088 H2al1mQ9DAD9 105 aa7.15□□□□□ -1.27
Rnf40-201ENSMUST00000033088 Igkv3-12A0A140T8P0 119 aa7.14□□□□□ -1.27
Rnf40-201ENSMUST00000033088 Tcl1b5P56845 121 aa7.14□□□□□ -1.27
Rnf40-201ENSMUST00000033088 SycnQ8VCK7 134 aa7.14□□□□□ -1.27
Rnf40-201ENSMUST00000033088 Coa5Q99M07 74 aa7.14□□□□□ -1.27
Rnf40-201ENSMUST00000033088 Sox16Q62247 57 aa7.12□□□□□ -1.27
Rnf40-201ENSMUST00000033088 Krtap26-1Q9D7N2 215 aa7.11□□□□□ -1.27
Rnf40-201ENSMUST00000033088 Ighv2-5A0A0A6YY69 116 aa7.11□□□□□ -1.27
Rnf40-201ENSMUST00000033088 AY074887Q8R5F9 132 aa7.11□□□□□ -1.27
Rnf40-201ENSMUST00000033088 Gm7137J3QMW1 236 aa7.1□□□□□ -1.27
Rnf40-201ENSMUST00000033088 Elof1P60003 83 aa7.1□□□□□ -1.27
Rnf40-201ENSMUST00000033088 Gm7138L7N2C3 230 aa7.09□□□□□ -1.27
Rnf40-201ENSMUST00000033088 Defb1P56386 69 aa7.09□□□□□ -1.27
Rnf40-201ENSMUST00000033088 Wfdc17Q5SSJ1 76 aa7.09□□□□□ -1.27
Rnf40-201ENSMUST00000033088 Defb39Q70KL3 74 aa7.09□□□□□ -1.27
Rnf40-201ENSMUST00000033088 Gm3238W4VSP7 230 aa7.09□□□□□ -1.27
Rnf40-201ENSMUST00000033088 Cdc42se1Q8BHL7 80 aa7.08□□□□□ -1.28
Rnf40-201ENSMUST00000033088 Ank2Q8C8R3 3898 aa7.08□□□□□ -1.28
Rnf40-201ENSMUST00000033088 Q8BT88 171 aa7.07□□□□□ -1.28
Rnf40-201ENSMUST00000033088 Gm10160F6Y577 67 aa7.07□□□□□ -1.28
Rnf40-201ENSMUST00000033088 P84750 121 aa7.07□□□□□ -1.28
Rnf40-201ENSMUST00000033088 Snhg11Q4G0K9 87 aa7.07□□□□□ -1.28
Rnf40-201ENSMUST00000033088 CubnQ9JLB4 3623 aa7.06□□□□□ -1.28
Rnf40-201ENSMUST00000033088 Phxr5P08399 672 aa7.05□□□□□ -1.28
Rnf40-201ENSMUST00000033088 Krtap24-1G3X9A2 248 aa7.04□□□□□ -1.28
Rnf40-201ENSMUST00000033088 U90926O08546 118 aa7.04□□□□□ -1.28
Rnf40-201ENSMUST00000033088 Ighv2-2A0A075B5P8 116 aa7.03□□□□□ -1.28
Rnf40-201ENSMUST00000033088 P01821 116 aa7.03□□□□□ -1.28
Rnf40-201ENSMUST00000033088 Nupr2Q497P3 102 aa7.03□□□□□ -1.28
Rnf40-201ENSMUST00000033088 1600014C23RikQ9DAX4 101 aa7.03□□□□□ -1.28
Rnf40-201ENSMUST00000033088 Gm20661K7N787 53 aa7.03□□□□□ -1.28
Rnf40-201ENSMUST00000033088 Ndufb1P0DN34 57 aa7.02□□□□□ -1.29
Rnf40-201ENSMUST00000033088 Gm7276Q3TYW4 209 aa7.02□□□□□ -1.29
Rnf40-201ENSMUST00000033088 Ighv8-13A0A075B5Y0 101 aa7.02□□□□□ -1.29
Rnf40-201ENSMUST00000033088 Gm20604F8WIA3 75 aa7.01□□□□□ -1.29
Rnf40-201ENSMUST00000033088 Gm10642Q3TWM1 71 aa7.01□□□□□ -1.29
Rnf40-201ENSMUST00000033088 TgO08710 2766 aa7.01□□□□□ -1.29
Rnf40-201ENSMUST00000033088 Chtf8P0CG14 533 aa7□□□□□ -1.29
Rnf40-201ENSMUST00000033088 Phf5aP83870 110 aaKnown RBP7□□□□□ -1.29
Rnf40-201ENSMUST00000033088 Gm43218A0A0G2JGT0 114 aa7□□□□□ -1.29
Rnf40-201ENSMUST00000033088 Gm9508A0A1W2P7W0 230 aa6.99□□□□□ -1.29
Rnf40-201ENSMUST00000033088 Srrm2Q8BTI8 2703 aaKnown RBP6.99□□□□□ -1.29
Rnf40-201ENSMUST00000033088 Anapc11Q9CPX9 84 aa6.98□□□□□ -1.29
Rnf40-201ENSMUST00000033088 Adm2Q7TNK8 150 aa6.97□□□□□ -1.29
Rnf40-201ENSMUST00000033088 BsnO88737 3942 aa6.97□□□□□ -1.29
Rnf40-201ENSMUST00000033088 Sprr4Q8CGN8 76 aa6.97□□□□□ -1.29
Rnf40-201ENSMUST00000033088 A730071L15RikQ8C4X0 137 aa6.96□□□□□ -1.3
Rnf40-201ENSMUST00000033088 Gm10999F6Q4M4 69 aa6.95□□□□□ -1.3
Rnf40-201ENSMUST00000033088 Phxr4P15974 95 aa6.95□□□□□ -1.3
Rnf40-201ENSMUST00000033088 Dmac1Q9CQ00 111 aa6.95□□□□□ -1.3
Rnf40-201ENSMUST00000033088 Wfdc6bF6ULY1 148 aa6.93□□□□□ -1.3
Rnf40-201ENSMUST00000033088 Sprr1bQ62267 153 aa6.92□□□□□ -1.3
Rnf40-201ENSMUST00000033088 Gm10837Q3UTT8 145 aa6.91□□□□□ -1.3
Rnf40-201ENSMUST00000033088 FcgbpE9Q0B5 2583 aa6.89□□□□□ -1.31
Rnf40-201ENSMUST00000033088 Chchd10Q7TNL9 138 aa6.87□□□□□ -1.31
Rnf40-201ENSMUST00000033088 Spaca4Q80ZQ0 127 aa6.87□□□□□ -1.31
Rnf40-201ENSMUST00000033088 Zcchc13Q9D548 170 aa6.87□□□□□ -1.31
Rnf40-201ENSMUST00000033088 A930002H24RikQ8C8Y3 163 aa6.86□□□□□ -1.31
Rnf40-201ENSMUST00000033088 Znf414Q9DCK4 299 aa6.86□□□□□ -1.31
Rnf40-201ENSMUST00000033088 Gm11627A6PWP4 55 aa6.84□□□□□ -1.31
Rnf40-201ENSMUST00000033088 Xirp2Q4U4S6 3784 aa6.84□□□□□ -1.32
Rnf40-201ENSMUST00000033088 Tenm1Q9WTS4 2731 aa6.83□□□□□ -1.32
Rnf40-201ENSMUST00000033088 AplnQ9R0R4 77 aa6.82□□□□□ -1.32
Rnf40-201ENSMUST00000033088 Tenm4Q3UHK6 2771 aa6.81□□□□□ -1.32
Rnf40-201ENSMUST00000033088 Q8BGJ3 129 aa6.81□□□□□ -1.32
Rnf40-201ENSMUST00000033088 Fbn1Q61554 2873 aaKnown RBP6.8□□□□□ -1.32
Rnf40-201ENSMUST00000033088 Plac8Q9JI48 112 aa6.8□□□□□ -1.32
Rnf40-201ENSMUST00000033088 Gm16181B0V2H2 73 aa6.76□□□□□ -1.33
Rnf40-201ENSMUST00000033088 Fam104aA2A6P4 185 aa6.75□□□□□ -1.33
Rnf40-201ENSMUST00000033088 Ly6g6cQ9Z1Q4 126 aa6.75□□□□□ -1.33
Rnf40-201ENSMUST00000033088 Gm36176A0A1W2P8D5 158 aa6.74□□□□□ -1.33
Rnf40-201ENSMUST00000033088 Prol1E9PYQ4 312 aa6.74□□□□□ -1.33
Rnf40-201ENSMUST00000033088 VwfQ8CIZ8 2813 aa6.74□□□□□ -1.33
Rnf40-201ENSMUST00000033088 Gpr15lA0A0B4J1N3 78 aa6.74□□□□□ -1.33
Rnf40-201ENSMUST00000033088 CriptO70333 101 aa6.73□□□□□ -1.33
Rnf40-201ENSMUST00000033088 Defb9Q8R2I6 67 aa6.73□□□□□ -1.33
Rnf40-201ENSMUST00000033088 Gm3646F6S692 53 aa6.71□□□□□ -1.34
Rnf40-201ENSMUST00000033088 Gm21798J3QNU5 87 aa6.68□□□□□ -1.34
Rnf40-201ENSMUST00000033088 Limd2Q8BGB5 128 aa6.67□□□□□ -1.34
Rnf40-201ENSMUST00000033088 Psors1c2Q80ZC9 134 aa6.67□□□□□ -1.34
Rnf40-201ENSMUST00000033088 Q8K1L6 76 aa6.67□□□□□ -1.34
Rnf40-201ENSMUST00000033088 Ccdc179J3QM76 67 aa6.66□□□□□ -1.34
Rnf40-201ENSMUST00000033088 Znf706Q9D115 76 aaKnown RBP6.66□□□□□ -1.34
Rnf40-201ENSMUST00000033088 6030445D17RikE9Q8F9 148 aa6.65□□□□□ -1.34
Rnf40-201ENSMUST00000033088 Defb10Q8R2I8 73 aa6.65□□□□□ -1.35
Rnf40-201ENSMUST00000033088 Gm9821Q8K076 103 aa6.63□□□□□ -1.35
Rnf40-201ENSMUST00000033088 4933415A04RikQ9D443 101 aa6.63□□□□□ -1.35
Rnf40-201ENSMUST00000033088 Gm27235Q3UW50 83 aa6.62□□□□□ -1.35
Rnf40-201ENSMUST00000033088 Hspg2Q05793 3707 aaKnown RBP6.61□□□□□ -1.35
Rnf40-201ENSMUST00000033088 Gm3880A0A1B0GSB3 72 aa6.61□□□□□ -1.35
Rnf40-201ENSMUST00000033088 Gm26620Q9CY65 116 aa6.6□□□□□ -1.35
Rnf40-201ENSMUST00000033088 1700042G07RikB1AUF7 90 aa6.59□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 67.7 ms