RNA–Protein interactions for RNA: ENSMUST00000029422.13

Shox2-201, Transcript of Short stature homeobox protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shox2, Length 3,079 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2-201ENSMUST00000029422 Itpr2Q9Z329 2701 aa12.84□□□□□ -0.35
Shox2-201ENSMUST00000029422 Vpreb3D3Z6J4 130 aa12.84□□□□□ -0.35
Shox2-201ENSMUST00000029422 P84750 121 aa12.83□□□□□ -0.36
Shox2-201ENSMUST00000029422 Cdc42se1Q8BHL7 80 aa12.82□□□□□ -0.36
Shox2-201ENSMUST00000029422 Dmac1Q9CQ00 111 aa12.81□□□□□ -0.36
Shox2-201ENSMUST00000029422 Gm16485Q8C4B7 115 aa12.81□□□□□ -0.36
Shox2-201ENSMUST00000029422 Igkv3-12A0A140T8P0 119 aa12.8□□□□□ -0.36
Shox2-201ENSMUST00000029422 Obox2E9PXV9 151 aa12.8□□□□□ -0.36
Shox2-201ENSMUST00000029422 AI606181Q8C7B9 129 aa12.8□□□□□ -0.36
Shox2-201ENSMUST00000029422 Reg3aO09037 175 aa12.79□□□□□ -0.36
Shox2-201ENSMUST00000029422 Gm21886J3QJU9 214 aa12.78□□□□□ -0.36
Shox2-201ENSMUST00000029422 Coa5Q99M07 74 aa12.78□□□□□ -0.36
Shox2-201ENSMUST00000029422 9530053A07RikE9PVG8 2581 aa12.78□□□□□ -0.36
Shox2-201ENSMUST00000029422 AplnQ9R0R4 77 aa12.77□□□□□ -0.37
Shox2-201ENSMUST00000029422 A930002H24RikQ8C8Y3 163 aa12.76□□□□□ -0.37
Shox2-201ENSMUST00000029422 Srrm2Q8BTI8 2703 aaKnown RBP12.76□□□□□ -0.37
Shox2-201ENSMUST00000029422 TgO08710 2766 aa12.73□□□□□ -0.37
Shox2-201ENSMUST00000029422 Igkv3-10A0A0G2JGN0 119 aa12.73□□□□□ -0.37
Shox2-201ENSMUST00000029422 Atox1O08997 68 aaKnown RBP12.73□□□□□ -0.37
Shox2-201ENSMUST00000029422 Rpl37aP61514 92 aa12.73□□□□□ -0.37
Shox2-201ENSMUST00000029422 Sslp1Q3UN54 99 aa12.73□□□□□ -0.37
Shox2-201ENSMUST00000029422 1700074P13RikQ9D9G7 251 aa12.72□□□□□ -0.37
Shox2-201ENSMUST00000029422 Wfdc6bF6ULY1 148 aa12.71□□□□□ -0.37
Shox2-201ENSMUST00000029422 VwfQ8CIZ8 2813 aa12.7□□□□□ -0.38
Shox2-201ENSMUST00000029422 Fn1P11276 2477 aaKnown RBP12.68□□□□□ -0.38
Shox2-201ENSMUST00000029422 A0A286YE49 62 aa12.68□□□□□ -0.38
Shox2-201ENSMUST00000029422 Gm16181B0V2H2 73 aa12.66□□□□□ -0.38
Shox2-201ENSMUST00000029422 Gm7137J3QMW1 236 aa12.65□□□□□ -0.38
Shox2-201ENSMUST00000029422 Gm11627A6PWP4 55 aa12.65□□□□□ -0.38
Shox2-201ENSMUST00000029422 Gm12353A2AGJ4 60 aa12.63□□□□□ -0.39
Shox2-201ENSMUST00000029422 Phxr5P08399 672 aa12.63□□□□□ -0.39
Shox2-201ENSMUST00000029422 Gm28230A0A0A0MQ91 144 aa12.61□□□□□ -0.39
Shox2-201ENSMUST00000029422 Defb38Q7TNV7 63 aa12.61□□□□□ -0.39
Shox2-201ENSMUST00000029422 Zcchc13Q9D548 170 aa12.6□□□□□ -0.39
Shox2-201ENSMUST00000029422 Gm10267M0QWD8 85 aa12.6□□□□□ -0.39
Shox2-201ENSMUST00000029422 Sprr1aQ62266 144 aa12.6□□□□□ -0.39
Shox2-201ENSMUST00000029422 Prol1E9PYQ4 312 aa12.57□□□□□ -0.4
Shox2-201ENSMUST00000029422 Gm37013Q8K491 104 aa12.55□□□□□ -0.4
Shox2-201ENSMUST00000029422 Igkv3-7A0A0G2JE31 119 aa12.53□□□□□ -0.4
Shox2-201ENSMUST00000029422 FasnP19096 2504 aaKnown RBP12.53□□□□□ -0.4
Shox2-201ENSMUST00000029422 B9d2Q3UK10 175 aa12.52□□□□□ -0.41
Shox2-201ENSMUST00000029422 Ube2aQ9Z255 152 aa12.51□□□□□ -0.41
Shox2-201ENSMUST00000029422 9230102O04RikA2ASX7 82 aa12.51□□□□□ -0.41
Shox2-201ENSMUST00000029422 Odf3bQ5M8M2 238 aa12.51□□□□□ -0.41
Shox2-201ENSMUST00000029422 U90926O08546 118 aa12.51□□□□□ -0.41
Shox2-201ENSMUST00000029422 Chtf8P0CG14 533 aa12.51□□□□□ -0.41
Shox2-201ENSMUST00000029422 Dnah7bL7N1Y0 4068 aa12.5□□□□□ -0.41
Shox2-201ENSMUST00000029422 Phxr4P15974 95 aa12.46□□□□□ -0.41
Shox2-201ENSMUST00000029422 Gm36176A0A1W2P8D5 158 aa12.46□□□□□ -0.42
Shox2-201ENSMUST00000029422 Sec61gP60060 68 aa12.46□□□□□ -0.42
Shox2-201ENSMUST00000029422 4933415A04RikQ9D443 101 aa12.46□□□□□ -0.42
Shox2-201ENSMUST00000029422 Fam104aA2A6P4 185 aa12.45□□□□□ -0.42
Shox2-201ENSMUST00000029422 SycnQ8VCK7 134 aa12.43□□□□□ -0.42
Shox2-201ENSMUST00000029422 Phf5aP83870 110 aaKnown RBP12.41□□□□□ -0.42
Shox2-201ENSMUST00000029422 Sox16Q62247 57 aa12.38□□□□□ -0.43
Shox2-201ENSMUST00000029422 Kmt2aP55200 3966 aa12.36□□□□□ -0.43
Shox2-201ENSMUST00000029422 Chchd10Q7TNL9 138 aa12.36□□□□□ -0.43
Shox2-201ENSMUST00000029422 Stab2Q8R4U0 2559 aa12.35□□□□□ -0.43
Shox2-201ENSMUST00000029422 Dnah10D3YYQ8 4591 aa12.35□□□□□ -0.43
Shox2-201ENSMUST00000029422 Gm9508A0A1W2P7W0 230 aa12.35□□□□□ -0.43
Shox2-201ENSMUST00000029422 Igsf10Q3V1M1 2594 aa12.35□□□□□ -0.43
Shox2-201ENSMUST00000029422 Gm10139O88245 57 aa12.33□□□□□ -0.44
Shox2-201ENSMUST00000029422 SptssbQ925E8 76 aa12.33□□□□□ -0.44
Shox2-201ENSMUST00000029422 Wfdc10Q3V2J9 124 aa12.32□□□□□ -0.44
Shox2-201ENSMUST00000029422 Gm10160F6Y577 67 aa12.3□□□□□ -0.44
Shox2-201ENSMUST00000029422 Gm10837Q3UTT8 145 aa12.3□□□□□ -0.44
Shox2-201ENSMUST00000029422 Spata3Q9D9T6 193 aa12.29□□□□□ -0.44
Shox2-201ENSMUST00000029422 Igkv3-5A0A140T8M6 119 aa12.29□□□□□ -0.44
Shox2-201ENSMUST00000029422 Pkd1l1Q8R526 2615 aa12.29□□□□□ -0.44
Shox2-201ENSMUST00000029422 Megf8P60882 2789 aa12.28□□□□□ -0.44
Shox2-201ENSMUST00000029422 Dnah3Q8BW94 4083 aa12.25□□□□□ -0.45
Shox2-201ENSMUST00000029422 Gm2310J3QNJ2 377 aa12.24□□□□□ -0.45
Shox2-201ENSMUST00000029422 Tenm2Q9WTS5 2764 aa12.23□□□□□ -0.45
Shox2-201ENSMUST00000029422 Gm20661K7N787 53 aa12.23□□□□□ -0.45
Shox2-201ENSMUST00000029422 Dnah14A0A140LIJ4 4489 aa12.21□□□□□ -0.45
Shox2-201ENSMUST00000029422 Igkv3-3A0A140T8Q0 119 aa12.2□□□□□ -0.46
Shox2-201ENSMUST00000029422 Muc6Q80T03 2850 aa12.2□□□□□ -0.46
Shox2-201ENSMUST00000029422 Gm10642Q3TWM1 71 aa12.18□□□□□ -0.46
Shox2-201ENSMUST00000029422 Defb9Q8R2I6 67 aa12.18□□□□□ -0.46
Shox2-201ENSMUST00000029422 Gm20604F8WIA3 75 aa12.17□□□□□ -0.46
Shox2-201ENSMUST00000029422 1700012A03RikQ9DAF1 130 aa12.15□□□□□ -0.46
Shox2-201ENSMUST00000029422 Anapc11Q9CPX9 84 aa12.12□□□□□ -0.47
Shox2-201ENSMUST00000029422 Dnah11E9Q7N9 4488 aa12.09□□□□□ -0.47
Shox2-201ENSMUST00000029422 2310061N02RikQ9D6S9 174 aa12.09□□□□□ -0.47
Shox2-201ENSMUST00000029422 6030445D17RikE9Q8F9 148 aa12.08□□□□□ -0.48
Shox2-201ENSMUST00000029422 Nupr2Q497P3 102 aa12.08□□□□□ -0.48
Shox2-201ENSMUST00000029422 Gm3646F6S692 53 aa12.06□□□□□ -0.48
Shox2-201ENSMUST00000029422 Plac8Q9JI48 112 aa12.04□□□□□ -0.48
Shox2-201ENSMUST00000029422 Gm27235Q3UW50 83 aa12.03□□□□□ -0.48
Shox2-201ENSMUST00000029422 Wfdc17Q5SSJ1 76 aa12.02□□□□□ -0.48
Shox2-201ENSMUST00000029422 Dnah1E9Q8T7 4250 aa12□□□□□ -0.49
Shox2-201ENSMUST00000029422 1700042G07RikB1AUF7 90 aa11.99□□□□□ -0.49
Shox2-201ENSMUST00000029422 Ndufb1P0DN34 57 aa11.99□□□□□ -0.49
Shox2-201ENSMUST00000029422 Gm26620Q9CY65 116 aa11.98□□□□□ -0.49
Shox2-201ENSMUST00000029422 Ndufs5Q99LY9 106 aa11.97□□□□□ -0.49
Shox2-201ENSMUST00000029422 Gm21798J3QNU5 87 aa11.96□□□□□ -0.49
Shox2-201ENSMUST00000029422 Gm4707V9GXN5 68 aa11.96□□□□□ -0.49
Shox2-201ENSMUST00000029422 Dnah9B1AR51 4484 aa11.93□□□□□ -0.5
Shox2-201ENSMUST00000029422 Dnah17Q69Z23 4481 aa11.93□□□□□ -0.5
Shox2-201ENSMUST00000029422 Defb13Q8R2I4 64 aa11.93□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 45.5 ms