RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Defb11Q8R2I7 77 aa7.39□□□□□ -1.23
Trim55-201ENSMUST00000029139 Gm8439G3UWA7 96 aa7.39□□□□□ -1.23
Trim55-201ENSMUST00000029139 Psors1c2Q80ZC9 134 aa7.39□□□□□ -1.23
Trim55-201ENSMUST00000029139 Gpha2Q925Q5 128 aa7.39□□□□□ -1.23
Trim55-201ENSMUST00000029139 Wnk1P83741 2377 aa7.38□□□□□ -1.23
Trim55-201ENSMUST00000029139 Prh1P05142 261 aa7.38□□□□□ -1.23
Trim55-201ENSMUST00000029139 Pla2g10Q9QXX3 151 aa7.38□□□□□ -1.23
Trim55-201ENSMUST00000029139 Ighv8-13A0A075B5Y0 101 aa7.37□□□□□ -1.23
Trim55-201ENSMUST00000029139 CicQ924A2 2510 aa7.35□□□□□ -1.23
Trim55-201ENSMUST00000029139 6030445D17RikE9Q8F9 148 aa7.35□□□□□ -1.23
Trim55-201ENSMUST00000029139 Gm10267M0QWD8 85 aa7.34□□□□□ -1.23
Trim55-201ENSMUST00000029139 Adgrg4B7ZCC9 3073 aa7.34□□□□□ -1.23
Trim55-201ENSMUST00000029139 Defb42Q8BVB5 75 aa7.33□□□□□ -1.24
Trim55-201ENSMUST00000029139 OtoglF7A4A7 2325 aa7.33□□□□□ -1.24
Trim55-201ENSMUST00000029139 Romo1P60603 79 aa7.33□□□□□ -1.24
Trim55-201ENSMUST00000029139 Gm3233E9Q2H5 230 aa7.32□□□□□ -1.24
Trim55-201ENSMUST00000029139 Ankhd1E9PUR0 2548 aaKnown RBP7.32□□□□□ -1.24
Trim55-201ENSMUST00000029139 PscaP57096 123 aa7.31□□□□□ -1.24
Trim55-201ENSMUST00000029139 Usp9xP70398 2559 aaKnown RBP7.29□□□□□ -1.24
Trim55-201ENSMUST00000029139 Gm7257D3YX25 99 aa7.29□□□□□ -1.24
Trim55-201ENSMUST00000029139 Wfdc17Q5SSJ1 76 aa7.29□□□□□ -1.24
Trim55-201ENSMUST00000029139 Prol1E9PYQ4 312 aa7.29□□□□□ -1.24
Trim55-201ENSMUST00000029139 Fbn1Q61554 2873 aaKnown RBP7.28□□□□□ -1.24
Trim55-201ENSMUST00000029139 D730001G18RikA0A087WQU7 115 aa7.27□□□□□ -1.25
Trim55-201ENSMUST00000029139 Odf3bQ5M8M2 238 aa7.27□□□□□ -1.25
Trim55-201ENSMUST00000029139 PolqQ8CGS6 2544 aa7.27□□□□□ -1.25
Trim55-201ENSMUST00000029139 Rpl37aP61514 92 aa7.25□□□□□ -1.25
Trim55-201ENSMUST00000029139 Defb38Q7TNV7 63 aa7.25□□□□□ -1.25
Trim55-201ENSMUST00000029139 Nav3Q80TN7 2359 aa7.25□□□□□ -1.25
Trim55-201ENSMUST00000029139 1700018G05RikA0A1B0GSI2 66 aa7.25□□□□□ -1.25
Trim55-201ENSMUST00000029139 PrlhG3UWC3 86 aa7.24□□□□□ -1.25
Trim55-201ENSMUST00000029139 Nsd1O88491 2588 aaKnown RBP7.24□□□□□ -1.25
Trim55-201ENSMUST00000029139 Pla2g1bQ9Z0Y2 146 aa7.23□□□□□ -1.25
Trim55-201ENSMUST00000029139 MtorQ9JLN9 2549 aa7.23□□□□□ -1.25
Trim55-201ENSMUST00000029139 Gm3443F7CCV5 94 aa7.23□□□□□ -1.25
Trim55-201ENSMUST00000029139 Gm2310J3QNJ2 377 aa7.23□□□□□ -1.25
Trim55-201ENSMUST00000029139 Abca2P41234 2434 aa7.23□□□□□ -1.25
Trim55-201ENSMUST00000029139 Ank2Q8C8R3 3898 aa7.22□□□□□ -1.25
Trim55-201ENSMUST00000029139 Camk2n2Q78WH7 79 aa7.21□□□□□ -1.25
Trim55-201ENSMUST00000029139 Sprr4Q8CGN8 76 aa7.2□□□□□ -1.26
Trim55-201ENSMUST00000029139 Hivep3A2A884 2348 aa7.2□□□□□ -1.26
Trim55-201ENSMUST00000029139 PrcdQ00LT2 53 aa7.19□□□□□ -1.26
Trim55-201ENSMUST00000029139 A730009L09RikA0A1B0GS82 72 aa7.18□□□□□ -1.26
Trim55-201ENSMUST00000029139 Tenm3Q9WTS6 2715 aa7.17□□□□□ -1.26
Trim55-201ENSMUST00000029139 AtrQ9JKK8 2635 aa7.16□□□□□ -1.26
Trim55-201ENSMUST00000029139 Cmc4Q61908 68 aa7.16□□□□□ -1.26
Trim55-201ENSMUST00000029139 Defb9Q8R2I6 67 aa7.15□□□□□ -1.26
Trim55-201ENSMUST00000029139 Dmac1Q9CQ00 111 aa7.14□□□□□ -1.27
Trim55-201ENSMUST00000029139 Gm28230A0A0A0MQ91 144 aa7.14□□□□□ -1.27
Trim55-201ENSMUST00000029139 TgO08710 2766 aa7.13□□□□□ -1.27
Trim55-201ENSMUST00000029139 P84750 121 aa7.11□□□□□ -1.27
Trim55-201ENSMUST00000029139 Sslp1Q3UN54 99 aa7.11□□□□□ -1.27
Trim55-201ENSMUST00000029139 Celsr2Q9R0M0 2920 aa7.1□□□□□ -1.27
Trim55-201ENSMUST00000029139 Itpr2Q9Z329 2701 aa7.09□□□□□ -1.27
Trim55-201ENSMUST00000029139 Svep1A2AVA0 3567 aa7.07□□□□□ -1.28
Trim55-201ENSMUST00000029139 Gm21798J3QNU5 87 aa7.06□□□□□ -1.28
Trim55-201ENSMUST00000029139 Gm27235Q3UW50 83 aa7.06□□□□□ -1.28
Trim55-201ENSMUST00000029139 Gm21887J3QQ04 176 aa7.05□□□□□ -1.28
Trim55-201ENSMUST00000029139 AW011738F6S7Q2 159 aa7.04□□□□□ -1.28
Trim55-201ENSMUST00000029139 Gm4707V9GXN5 68 aa7.04□□□□□ -1.28
Trim55-201ENSMUST00000029139 Wfdc10Q3V2J9 124 aa7.03□□□□□ -1.28
Trim55-201ENSMUST00000029139 Krtap17-1A2A5X6 109 aa7.01□□□□□ -1.29
Trim55-201ENSMUST00000029139 FlncQ8VHX6 2726 aaKnown RBP7□□□□□ -1.29
Trim55-201ENSMUST00000029139 Gm7138L7N2C3 230 aa7□□□□□ -1.29
Trim55-201ENSMUST00000029139 Gm3238W4VSP7 230 aa7□□□□□ -1.29
Trim55-201ENSMUST00000029139 Zfp462B1AWL2 2495 aaKnown RBP6.99□□□□□ -1.29
Trim55-201ENSMUST00000029139 Utp20Q5XG71 2788 aaKnown RBP6.98□□□□□ -1.29
Trim55-201ENSMUST00000029139 FlnaQ8BTM8 2647 aaKnown RBP6.97□□□□□ -1.29
Trim55-201ENSMUST00000029139 Pkd1l1Q8R526 2615 aa6.96□□□□□ -1.3
Trim55-201ENSMUST00000029139 Tenm2Q9WTS5 2764 aa6.93□□□□□ -1.3
Trim55-201ENSMUST00000029139 Snhg11Q4G0K9 87 aa6.92□□□□□ -1.3
Trim55-201ENSMUST00000029139 Fam168bQ80XQ8 194 aa6.92□□□□□ -1.3
Trim55-201ENSMUST00000029139 Gm11627A6PWP4 55 aa6.91□□□□□ -1.3
Trim55-201ENSMUST00000029139 Rnase1P00683 149 aa6.91□□□□□ -1.3
Trim55-201ENSMUST00000029139 NipblQ6KCD5 2798 aaKnown RBP6.9□□□□□ -1.3
Trim55-201ENSMUST00000029139 Col6a5A6H584 2640 aa6.9□□□□□ -1.3
Trim55-201ENSMUST00000029139 Krtap14O08640 167 aa6.9□□□□□ -1.31
Trim55-201ENSMUST00000029139 Hivep1Q03172 2688 aa6.88□□□□□ -1.31
Trim55-201ENSMUST00000029139 Leap2Q91V13 76 aa6.88□□□□□ -1.31
Trim55-201ENSMUST00000029139 Xirp2Q4U4S6 3784 aa6.88□□□□□ -1.31
Trim55-201ENSMUST00000029139 Ndufaf8A2AMZ4 74 aa6.87□□□□□ -1.31
Trim55-201ENSMUST00000029139 Gm10139O88245 57 aa6.86□□□□□ -1.31
Trim55-201ENSMUST00000029139 Csmd2V9GX34 3611 aa6.86□□□□□ -1.31
Trim55-201ENSMUST00000029139 Pdzd2E9Q1M1 2796 aa6.86□□□□□ -1.31
Trim55-201ENSMUST00000029139 PrkdcP97313 4128 aa6.85□□□□□ -1.31
Trim55-201ENSMUST00000029139 Dync2h1Q45VK7 4306 aa6.83□□□□□ -1.32
Trim55-201ENSMUST00000029139 Gm3880A0A1B0GSB3 72 aa6.81□□□□□ -1.32
Trim55-201ENSMUST00000029139 Lelp1Q9DAE3 120 aa6.81□□□□□ -1.32
Trim55-201ENSMUST00000029139 Sprr1aQ62266 144 aa6.79□□□□□ -1.32
Trim55-201ENSMUST00000029139 Gm9195A0A140LHT4 2805 aa6.78□□□□□ -1.32
Trim55-201ENSMUST00000029139 Wfdc3Q14AE4 130 aa6.76□□□□□ -1.33
Trim55-201ENSMUST00000029139 OtogO55225 2910 aa6.76□□□□□ -1.33
Trim55-201ENSMUST00000029139 Nf1Q04690 2841 aa6.75□□□□□ -1.33
Trim55-201ENSMUST00000029139 Csmd3Q80T79 3707 aa6.75□□□□□ -1.33
Trim55-201ENSMUST00000029139 CriptO70333 101 aa6.74□□□□□ -1.33
Trim55-201ENSMUST00000029139 SycnQ8VCK7 134 aa6.73□□□□□ -1.33
Trim55-201ENSMUST00000029139 Gm10999F6Q4M4 69 aa6.73□□□□□ -1.33
Trim55-201ENSMUST00000029139 Defb1P56386 69 aa6.71□□□□□ -1.33
Trim55-201ENSMUST00000029139 Rnase13Q5GAM7 153 aa6.71□□□□□ -1.33
Trim55-201ENSMUST00000029139 Gm20537G3UYK7 97 aa6.71□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 155.7 ms