RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Phf5aP83870 110 aaKnown RBP7.61□□□□□ -1.19
Sdc1-201ENSMUST00000020911 B9d2Q3UK10 175 aa7.61□□□□□ -1.19
Sdc1-201ENSMUST00000020911 ApcQ61315 2845 aa7.6□□□□□ -1.19
Sdc1-201ENSMUST00000020911 Fn1P11276 2477 aaKnown RBP7.59□□□□□ -1.19
Sdc1-201ENSMUST00000020911 Igkv3-12A0A140T8P0 119 aa7.59□□□□□ -1.19
Sdc1-201ENSMUST00000020911 Gm7137J3QMW1 236 aa7.58□□□□□ -1.2
Sdc1-201ENSMUST00000020911 Spata3Q9D9T6 193 aa7.58□□□□□ -1.2
Sdc1-201ENSMUST00000020911 VwfQ8CIZ8 2813 aa7.57□□□□□ -1.2
Sdc1-201ENSMUST00000020911 Mrpl34Q99N91 92 aa7.57□□□□□ -1.2
Sdc1-201ENSMUST00000020911 Gm44790A0A0N4SV91 103 aa7.56□□□□□ -1.2
Sdc1-201ENSMUST00000020911 1700074P13RikQ9D9G7 251 aa7.55□□□□□ -1.2
Sdc1-201ENSMUST00000020911 Smim29Q8R043 75 aa7.55□□□□□ -1.2
Sdc1-201ENSMUST00000020911 Ndufs5Q99LY9 106 aa7.54□□□□□ -1.2
Sdc1-201ENSMUST00000020911 Igsf10Q3V1M1 2594 aa7.54□□□□□ -1.2
Sdc1-201ENSMUST00000020911 Gm36176A0A1W2P8D5 158 aa7.53□□□□□ -1.2
Sdc1-201ENSMUST00000020911 AY074887Q8R5F9 132 aa7.52□□□□□ -1.21
Sdc1-201ENSMUST00000020911 Defb38Q7TNV7 63 aa7.52□□□□□ -1.21
Sdc1-201ENSMUST00000020911 Igkv3-9A0A140T8P4 119 aa7.51□□□□□ -1.21
Sdc1-201ENSMUST00000020911 Obox2E9PXV9 151 aa7.51□□□□□ -1.21
Sdc1-201ENSMUST00000020911 Elof1P60003 83 aa7.51□□□□□ -1.21
Sdc1-201ENSMUST00000020911 Cmc4Q61908 68 aa7.51□□□□□ -1.21
Sdc1-201ENSMUST00000020911 Cox7b2Q9D2H1 82 aa7.5□□□□□ -1.21
Sdc1-201ENSMUST00000020911 Chtf8P0CG14 533 aa7.49□□□□□ -1.21
Sdc1-201ENSMUST00000020911 Sprr1bQ62267 153 aa7.49□□□□□ -1.21
Sdc1-201ENSMUST00000020911 Gm17577J3QNF7 156 aa7.48□□□□□ -1.21
Sdc1-201ENSMUST00000020911 Cox6a2P43023 97 aa7.48□□□□□ -1.21
Sdc1-201ENSMUST00000020911 Gm43218A0A0G2JGT0 114 aa7.48□□□□□ -1.21
Sdc1-201ENSMUST00000020911 Krtap11-1E9Q2E9 183 aa7.47□□□□□ -1.21
Sdc1-201ENSMUST00000020911 Gm7276Q3TYW4 209 aa7.47□□□□□ -1.21
Sdc1-201ENSMUST00000020911 Gm17521F6QAC8 156 aa7.46□□□□□ -1.22
Sdc1-201ENSMUST00000020911 Sslp1Q3UN54 99 aa7.46□□□□□ -1.22
Sdc1-201ENSMUST00000020911 A0A286YE49 62 aa7.46□□□□□ -1.22
Sdc1-201ENSMUST00000020911 Gm10267M0QWD8 85 aa7.46□□□□□ -1.22
Sdc1-201ENSMUST00000020911 Gm20661K7N787 53 aa7.45□□□□□ -1.22
Sdc1-201ENSMUST00000020911 Reg3aO09037 175 aa7.45□□□□□ -1.22
Sdc1-201ENSMUST00000020911 2310034C09RikQ9D746 214 aa7.44□□□□□ -1.22
Sdc1-201ENSMUST00000020911 Igkv3-4A0A140T8Q4 119 aa7.43□□□□□ -1.22
Sdc1-201ENSMUST00000020911 Vpreb3D3Z6J4 130 aa7.43□□□□□ -1.22
Sdc1-201ENSMUST00000020911 Gm16485Q8C4B7 115 aa7.43□□□□□ -1.22
Sdc1-201ENSMUST00000020911 Reg3bP35230 175 aa7.43□□□□□ -1.22
Sdc1-201ENSMUST00000020911 Gm12216A0A1W2P827 62 aa7.43□□□□□ -1.22
Sdc1-201ENSMUST00000020911 HrnrQ8VHD8 2496 aa7.42□□□□□ -1.22
Sdc1-201ENSMUST00000020911 Rpl37aP61514 92 aa7.42□□□□□ -1.22
Sdc1-201ENSMUST00000020911 Gm37013Q8K491 104 aa7.42□□□□□ -1.22
Sdc1-201ENSMUST00000020911 Cdk2ap2Q9CPY4 127 aa7.42□□□□□ -1.22
Sdc1-201ENSMUST00000020911 TgO08710 2766 aa7.42□□□□□ -1.22
Sdc1-201ENSMUST00000020911 Gm21886J3QJU9 214 aa7.39□□□□□ -1.23
Sdc1-201ENSMUST00000020911 Zcchc13Q9D548 170 aa7.39□□□□□ -1.23
Sdc1-201ENSMUST00000020911 Pkd1l1Q8R526 2615 aa7.39□□□□□ -1.23
Sdc1-201ENSMUST00000020911 PscaP57096 123 aa7.38□□□□□ -1.23
Sdc1-201ENSMUST00000020911 Wfdc17Q5SSJ1 76 aa7.38□□□□□ -1.23
Sdc1-201ENSMUST00000020911 1700018G05RikA0A1B0GSI2 66 aa7.38□□□□□ -1.23
Sdc1-201ENSMUST00000020911 Chchd10Q7TNL9 138 aa7.38□□□□□ -1.23
Sdc1-201ENSMUST00000020911 Ighv8-13A0A075B5Y0 101 aa7.37□□□□□ -1.23
Sdc1-201ENSMUST00000020911 Snhg11Q4G0K9 87 aa7.37□□□□□ -1.23
Sdc1-201ENSMUST00000020911 Phxr5P08399 672 aa7.37□□□□□ -1.23
Sdc1-201ENSMUST00000020911 Dnah10D3YYQ8 4591 aa7.37□□□□□ -1.23
Sdc1-201ENSMUST00000020911 Tcl1b5P56845 121 aa7.36□□□□□ -1.23
Sdc1-201ENSMUST00000020911 A730009L09RikA0A1B0GS82 72 aa7.36□□□□□ -1.23
Sdc1-201ENSMUST00000020911 Csmd3Q80T79 3707 aa7.35□□□□□ -1.23
Sdc1-201ENSMUST00000020911 Ndufb1P0DN34 57 aa7.34□□□□□ -1.23
Sdc1-201ENSMUST00000020911 Wfdc6bF6ULY1 148 aa7.34□□□□□ -1.23
Sdc1-201ENSMUST00000020911 Defb10Q8R2I8 73 aa7.33□□□□□ -1.24
Sdc1-201ENSMUST00000020911 FasnP19096 2504 aaKnown RBP7.32□□□□□ -1.24
Sdc1-201ENSMUST00000020911 Psors1c2Q80ZC9 134 aa7.29□□□□□ -1.24
Sdc1-201ENSMUST00000020911 Stab2Q8R4U0 2559 aa7.29□□□□□ -1.24
Sdc1-201ENSMUST00000020911 AplnQ9R0R4 77 aa7.28□□□□□ -1.24
Sdc1-201ENSMUST00000020911 Camk2n2Q78WH7 79 aa7.28□□□□□ -1.24
Sdc1-201ENSMUST00000020911 Gm9508A0A1W2P7W0 230 aa7.27□□□□□ -1.25
Sdc1-201ENSMUST00000020911 Plac8Q9JI48 112 aa7.26□□□□□ -1.25
Sdc1-201ENSMUST00000020911 Znf706Q9D115 76 aaKnown RBP7.24□□□□□ -1.25
Sdc1-201ENSMUST00000020911 Dnah14A0A140LIJ4 4489 aa7.24□□□□□ -1.25
Sdc1-201ENSMUST00000020911 Cypt15B1AXS0 87 aa7.24□□□□□ -1.25
Sdc1-201ENSMUST00000020911 Cypt14J3QPF7 87 aa7.24□□□□□ -1.25
Sdc1-201ENSMUST00000020911 Dnah7bL7N1Y0 4068 aa7.23□□□□□ -1.25
Sdc1-201ENSMUST00000020911 Gm4707V9GXN5 68 aa7.22□□□□□ -1.25
Sdc1-201ENSMUST00000020911 Kmt2aP55200 3966 aa7.21□□□□□ -1.25
Sdc1-201ENSMUST00000020911 1700012A03RikQ9DAF1 130 aa7.21□□□□□ -1.26
Sdc1-201ENSMUST00000020911 Megf8P60882 2789 aa7.2□□□□□ -1.26
Sdc1-201ENSMUST00000020911 Fam168bQ80XQ8 194 aa7.2□□□□□ -1.26
Sdc1-201ENSMUST00000020911 Muc6Q80T03 2850 aa7.18□□□□□ -1.26
Sdc1-201ENSMUST00000020911 Sprr4Q8CGN8 76 aa7.18□□□□□ -1.26
Sdc1-201ENSMUST00000020911 Gm28230A0A0A0MQ91 144 aa7.17□□□□□ -1.26
Sdc1-201ENSMUST00000020911 Q8BGJ3 129 aa7.17□□□□□ -1.26
Sdc1-201ENSMUST00000020911 Dnah6E9Q0B6 4144 aa7.17□□□□□ -1.26
Sdc1-201ENSMUST00000020911 FcgbpE9Q0B5 2583 aa7.16□□□□□ -1.26
Sdc1-201ENSMUST00000020911 Gm20538F6Z9R1 75 aa7.16□□□□□ -1.26
Sdc1-201ENSMUST00000020911 Tenm2Q9WTS5 2764 aa7.16□□□□□ -1.26
Sdc1-201ENSMUST00000020911 Gm12353A2AGJ4 60 aa7.16□□□□□ -1.26
Sdc1-201ENSMUST00000020911 6030445D17RikE9Q8F9 148 aa7.16□□□□□ -1.26
Sdc1-201ENSMUST00000020911 Mp68P56379 58 aa7.15□□□□□ -1.27
Sdc1-201ENSMUST00000020911 Igkv3-5A0A140T8M6 119 aa7.14□□□□□ -1.27
Sdc1-201ENSMUST00000020911 P84750 121 aa7.14□□□□□ -1.27
Sdc1-201ENSMUST00000020911 Limd2Q8BGB5 128 aa7.12□□□□□ -1.27
Sdc1-201ENSMUST00000020911 Dnah3Q8BW94 4083 aa7.11□□□□□ -1.27
Sdc1-201ENSMUST00000020911 Odf3bQ5M8M2 238 aa7.11□□□□□ -1.27
Sdc1-201ENSMUST00000020911 Dmac1Q9CQ00 111 aa7.11□□□□□ -1.27
Sdc1-201ENSMUST00000020911 Gm2310J3QNJ2 377 aa7.1□□□□□ -1.27
Sdc1-201ENSMUST00000020911 Prol1E9PYQ4 312 aa7.09□□□□□ -1.27
Sdc1-201ENSMUST00000020911 Gm17349F7BGH6 99 aa7.08□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 67.8 ms