RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 CrygaP04345 174 aa8.63□□□□□ -1.03
Col6a3-208ENSMUST00000188587 Snhg11Q4G0K9 87 aa8.63□□□□□ -1.03
Col6a3-208ENSMUST00000188587 Limd2Q8BGB5 128 aa8.62□□□□□ -1.03
Col6a3-208ENSMUST00000188587 Gm17689B3GLJ4 109 aa8.62□□□□□ -1.03
Col6a3-208ENSMUST00000188587 PcntP48725 2898 aa8.62□□□□□ -1.03
Col6a3-208ENSMUST00000188587 Elof1P60003 83 aa8.61□□□□□ -1.03
Col6a3-208ENSMUST00000188587 HrnrQ8VHD8 2496 aa8.61□□□□□ -1.03
Col6a3-208ENSMUST00000188587 Spink13Q3UTS8 97 aa8.61□□□□□ -1.03
Col6a3-208ENSMUST00000188587 1810062G17RikG3X8Y2 129 aa8.6□□□□□ -1.03
Col6a3-208ENSMUST00000188587 3110070M22RikQ9DAQ7 118 aa8.6□□□□□ -1.03
Col6a3-208ENSMUST00000188587 Lama3Q61789 3330 aa8.6□□□□□ -1.03
Col6a3-208ENSMUST00000188587 Smr3aQ61900 147 aa8.6□□□□□ -1.03
Col6a3-208ENSMUST00000188587 Rpl37aP61514 92 aa8.59□□□□□ -1.03
Col6a3-208ENSMUST00000188587 Gm44790A0A0N4SV91 103 aa8.59□□□□□ -1.03
Col6a3-208ENSMUST00000188587 Ankrd11E9Q4F7 2643 aa8.59□□□□□ -1.03
Col6a3-208ENSMUST00000188587 Sostdc1Q9CQN4 206 aa8.58□□□□□ -1.04
Col6a3-208ENSMUST00000188587 Ighv2-2A0A075B5P8 116 aa8.57□□□□□ -1.04
Col6a3-208ENSMUST00000188587 P01821 116 aa8.57□□□□□ -1.04
Col6a3-208ENSMUST00000188587 Krtap24-1G3X9A2 248 aa8.57□□□□□ -1.04
Col6a3-208ENSMUST00000188587 Gm27235Q3UW50 83 aa8.57□□□□□ -1.04
Col6a3-208ENSMUST00000188587 Akap13E9Q394 2776 aa8.57□□□□□ -1.04
Col6a3-208ENSMUST00000188587 Gm26661M0QWV4 156 aa8.57□□□□□ -1.04
Col6a3-208ENSMUST00000188587 Gm3285A0A1W2P7U0 201 aa8.56□□□□□ -1.04
Col6a3-208ENSMUST00000188587 Gm10197F6QEY5 67 aa8.56□□□□□ -1.04
Col6a3-208ENSMUST00000188587 Gm10837Q3UTT8 145 aa8.54□□□□□ -1.04
Col6a3-208ENSMUST00000188587 Crip3Q6Q6R3 243 aa8.53□□□□□ -1.04
Col6a3-208ENSMUST00000188587 Gm10770F7D043 238 aa8.52□□□□□ -1.05
Col6a3-208ENSMUST00000188587 Gm5617Q91VN2 117 aa8.52□□□□□ -1.05
Col6a3-208ENSMUST00000188587 MobpQ9D2P8 170 aa8.52□□□□□ -1.05
Col6a3-208ENSMUST00000188587 Pla2g10Q9QXX3 151 aa8.52□□□□□ -1.05
Col6a3-208ENSMUST00000188587 Zfp292Q9Z2U2 2698 aa8.51□□□□□ -1.05
Col6a3-208ENSMUST00000188587 Nsd1O88491 2588 aaKnown RBP8.51□□□□□ -1.05
Col6a3-208ENSMUST00000188587 Fam168bQ80XQ8 194 aa8.49□□□□□ -1.05
Col6a3-208ENSMUST00000188587 Cdip1Q9DB75 208 aa8.49□□□□□ -1.05
Col6a3-208ENSMUST00000188587 Gm9195A0A140LHT4 2805 aa8.48□□□□□ -1.05
Col6a3-208ENSMUST00000188587 A530084C06RikQ3UTW2 186 aa8.46□□□□□ -1.06
Col6a3-208ENSMUST00000188587 Stab1Q8R4Y4 2571 aa8.45□□□□□ -1.06
Col6a3-208ENSMUST00000188587 Q8BT88 171 aa8.45□□□□□ -1.06
Col6a3-208ENSMUST00000188587 Psors1c2Q80ZC9 134 aa8.45□□□□□ -1.06
Col6a3-208ENSMUST00000188587 7530416G11RikJ3QJX6 159 aa8.45□□□□□ -1.06
Col6a3-208ENSMUST00000188587 Fn1P11276 2477 aaKnown RBP8.44□□□□□ -1.06
Col6a3-208ENSMUST00000188587 AtrQ9JKK8 2635 aa8.43□□□□□ -1.06
Col6a3-208ENSMUST00000188587 Rnase13Q5GAM7 153 aa8.43□□□□□ -1.06
Col6a3-208ENSMUST00000188587 FlnaQ8BTM8 2647 aaKnown RBP8.43□□□□□ -1.06
Col6a3-208ENSMUST00000188587 Krtap16-1A2A5X5 502 aa8.42□□□□□ -1.06
Col6a3-208ENSMUST00000188587 Bod1lE9Q6J5 3032 aa8.42□□□□□ -1.06
Col6a3-208ENSMUST00000188587 Phxr5P08399 672 aa8.4□□□□□ -1.06
Col6a3-208ENSMUST00000188587 Map1aQ9QYR6 2776 aa8.4□□□□□ -1.07
Col6a3-208ENSMUST00000188587 Ranbp2Q9ERU9 3053 aaKnown RBP8.39□□□□□ -1.07
Col6a3-208ENSMUST00000188587 Rps28P62858 69 aaKnown RBP8.39□□□□□ -1.07
Col6a3-208ENSMUST00000188587 Gm10772F7AIG4 85 aa8.38□□□□□ -1.07
Col6a3-208ENSMUST00000188587 AW011738F6S7Q2 159 aa8.38□□□□□ -1.07
Col6a3-208ENSMUST00000188587 Cdc42se1Q8BHL7 80 aa8.38□□□□□ -1.07
Col6a3-208ENSMUST00000188587 Gm10308Q9CVR5 141 aa8.38□□□□□ -1.07
Col6a3-208ENSMUST00000188587 CenpfE9Q3P4 2997 aaKnown RBP8.38□□□□□ -1.07
Col6a3-208ENSMUST00000188587 Lama2Q60675 3118 aaKnown RBP8.37□□□□□ -1.07
Col6a3-208ENSMUST00000188587 OxtP35454 125 aa8.36□□□□□ -1.07
Col6a3-208ENSMUST00000188587 AI854703Q8BIN3 203 aa8.36□□□□□ -1.07
Col6a3-208ENSMUST00000188587 Gm3250E9Q1M3 230 aa8.35□□□□□ -1.07
Col6a3-208ENSMUST00000188587 TrioQ0KL02 3102 aa8.34□□□□□ -1.07
Col6a3-208ENSMUST00000188587 Krtap11-1E9Q2E9 183 aa8.34□□□□□ -1.07
Col6a3-208ENSMUST00000188587 Coa5Q99M07 74 aa8.34□□□□□ -1.07
Col6a3-208ENSMUST00000188587 Sprr4Q8CGN8 76 aa8.33□□□□□ -1.08
Col6a3-208ENSMUST00000188587 Gcn1E9PVA8 2671 aaKnown RBP8.32□□□□□ -1.08
Col6a3-208ENSMUST00000188587 Uqcr11Q9CPX8 56 aa8.32□□□□□ -1.08
Col6a3-208ENSMUST00000188587 Krtap26-1Q9D7N2 215 aa8.29□□□□□ -1.08
Col6a3-208ENSMUST00000188587 Gm9821Q8K076 103 aa8.28□□□□□ -1.08
Col6a3-208ENSMUST00000188587 FlnbQ80X90 2602 aaKnown RBP8.28□□□□□ -1.08
Col6a3-208ENSMUST00000188587 Cypt15B1AXS0 87 aa8.27□□□□□ -1.09
Col6a3-208ENSMUST00000188587 Defb9Q8R2I6 67 aa8.27□□□□□ -1.09
Col6a3-208ENSMUST00000188587 CriptO70333 101 aa8.26□□□□□ -1.09
Col6a3-208ENSMUST00000188587 Ash1lQ99MY8 2958 aa8.25□□□□□ -1.09
Col6a3-208ENSMUST00000188587 Notch1Q01705 2531 aa8.24□□□□□ -1.09
Col6a3-208ENSMUST00000188587 Gm26620Q9CY65 116 aa8.22□□□□□ -1.09
Col6a3-208ENSMUST00000188587 Mki67E9PVX6 3177 aaKnown RBP8.21□□□□□ -1.09
Col6a3-208ENSMUST00000188587 NipblQ6KCD5 2798 aaKnown RBP8.21□□□□□ -1.09
Col6a3-208ENSMUST00000188587 AY074887Q8R5F9 132 aa8.21□□□□□ -1.1
Col6a3-208ENSMUST00000188587 Usp34Q6ZQ93 3582 aa8.21□□□□□ -1.1
Col6a3-208ENSMUST00000188587 Gm7276Q3TYW4 209 aa8.21□□□□□ -1.1
Col6a3-208ENSMUST00000188587 Spink7Q6IE32 76 aa8.2□□□□□ -1.1
Col6a3-208ENSMUST00000188587 Sprr1bQ62267 153 aa8.19□□□□□ -1.1
Col6a3-208ENSMUST00000188587 Anapc11Q9CPX9 84 aa8.19□□□□□ -1.1
Col6a3-208ENSMUST00000188587 Gm7173A0A0G2JEB6 3132 aa8.19□□□□□ -1.1
Col6a3-208ENSMUST00000188587 Phxr4P15974 95 aa8.18□□□□□ -1.1
Col6a3-208ENSMUST00000188587 Gm11213A0A1B0GR83 88 aa8.16□□□□□ -1.1
Col6a3-208ENSMUST00000188587 Plac8Q9JI48 112 aa8.13□□□□□ -1.11
Col6a3-208ENSMUST00000188587 A330070K13RikQ8CA53 115 aa8.12□□□□□ -1.11
Col6a3-208ENSMUST00000188587 Hectd1Q69ZR2 2618 aaKnown RBP8.12□□□□□ -1.11
Col6a3-208ENSMUST00000188587 2310034C09RikQ9D746 214 aa8.11□□□□□ -1.11
Col6a3-208ENSMUST00000188587 Rev3lQ61493 3122 aa8.11□□□□□ -1.11
Col6a3-208ENSMUST00000188587 Cfap54Q8C6S9 3106 aa8.11□□□□□ -1.11
Col6a3-208ENSMUST00000188587 Cdh23Q99PF4 3354 aa8.11□□□□□ -1.11
Col6a3-208ENSMUST00000188587 Gm21798J3QNU5 87 aa8.11□□□□□ -1.11
Col6a3-208ENSMUST00000188587 Col12a1Q60847 3120 aa8.11□□□□□ -1.11
Col6a3-208ENSMUST00000188587 Gm10643Q3URG9 111 aa8.1□□□□□ -1.11
Col6a3-208ENSMUST00000188587 CnbpP53996 178 aaKnown RBP8.09□□□□□ -1.11
Col6a3-208ENSMUST00000188587 Lypd5Q9D7Z7 256 aa8.08□□□□□ -1.12
Col6a3-208ENSMUST00000188587 C530025M09RikF6RGA8 229 aa8.07□□□□□ -1.12
Col6a3-208ENSMUST00000188587 Dmxl1Q6PNC0 3013 aa8.06□□□□□ -1.12
Col6a3-208ENSMUST00000188587 Celsr3Q91ZI0 3301 aa8.06□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 162.6 ms