RNA–Protein interactions for RNA: ENSMUST00000176172.7

Cux1-206, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cux1, Length 4,882 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-206ENSMUST00000176172 AI606181Q8C7B9 129 aa11.38□□□□□ -0.59
Cux1-206ENSMUST00000176172 Krtap16-1A2A5X5 502 aa11.36□□□□□ -0.59
Cux1-206ENSMUST00000176172 AI854703Q8BIN3 203 aa11.36□□□□□ -0.59
Cux1-206ENSMUST00000176172 Spint4Q9D263 159 aa11.34□□□□□ -0.59
Cux1-206ENSMUST00000176172 Phf5aP83870 110 aaKnown RBP11.33□□□□□ -0.6
Cux1-206ENSMUST00000176172 Gm10770F7D043 238 aa11.32□□□□□ -0.6
Cux1-206ENSMUST00000176172 Gm42715A0A087WP63 3095 aaKnown RBP11.31□□□□□ -0.6
Cux1-206ENSMUST00000176172 Gm17606F6ZL36 78 aa11.3□□□□□ -0.6
Cux1-206ENSMUST00000176172 Defb50Q6TU36 73 aa11.29□□□□□ -0.6
Cux1-206ENSMUST00000176172 CenpfE9Q3P4 2997 aaKnown RBP11.28□□□□□ -0.6
Cux1-206ENSMUST00000176172 Rps28P62858 69 aaKnown RBP11.28□□□□□ -0.6
Cux1-206ENSMUST00000176172 Gm10308Q9CVR5 141 aa11.28□□□□□ -0.6
Cux1-206ENSMUST00000176172 Gpr15lA0A0B4J1N3 78 aa11.26□□□□□ -0.61
Cux1-206ENSMUST00000176172 Ep400Q8CHI8 3072 aaKnown RBP11.26□□□□□ -0.61
Cux1-206ENSMUST00000176172 Gm27235Q3UW50 83 aa11.26□□□□□ -0.61
Cux1-206ENSMUST00000176172 Limd2Q8BGB5 128 aa11.25□□□□□ -0.61
Cux1-206ENSMUST00000176172 Sprr4Q8CGN8 76 aa11.25□□□□□ -0.61
Cux1-206ENSMUST00000176172 Gcn1E9PVA8 2671 aaKnown RBP11.24□□□□□ -0.61
Cux1-206ENSMUST00000176172 Q8BT88 171 aa11.23□□□□□ -0.61
Cux1-206ENSMUST00000176172 Gm10999F6Q4M4 69 aa11.22□□□□□ -0.61
Cux1-206ENSMUST00000176172 Notch1Q01705 2531 aa11.21□□□□□ -0.61
Cux1-206ENSMUST00000176172 A930002H24RikQ8C8Y3 163 aa11.21□□□□□ -0.61
Cux1-206ENSMUST00000176172 Lypd5Q9D7Z7 256 aa11.21□□□□□ -0.61
Cux1-206ENSMUST00000176172 Spaca4Q80ZQ0 127 aa11.2□□□□□ -0.62
Cux1-206ENSMUST00000176172 AY074887Q8R5F9 132 aa11.2□□□□□ -0.62
Cux1-206ENSMUST00000176172 AplnQ9R0R4 77 aa11.2□□□□□ -0.62
Cux1-206ENSMUST00000176172 FlnaQ8BTM8 2647 aaKnown RBP11.2□□□□□ -0.62
Cux1-206ENSMUST00000176172 Sprr1bQ62267 153 aa11.19□□□□□ -0.62
Cux1-206ENSMUST00000176172 A530084C06RikQ3UTW2 186 aa11.19□□□□□ -0.62
Cux1-206ENSMUST00000176172 Krtap11-1E9Q2E9 183 aa11.18□□□□□ -0.62
Cux1-206ENSMUST00000176172 4930507D05RikQ8C9C9 103 aa11.17□□□□□ -0.62
Cux1-206ENSMUST00000176172 AW011738F6S7Q2 159 aa11.16□□□□□ -0.62
Cux1-206ENSMUST00000176172 Eif4ebp3Q80VV3 101 aa11.15□□□□□ -0.62
Cux1-206ENSMUST00000176172 Gm17689B3GLJ4 109 aa11.15□□□□□ -0.62
Cux1-206ENSMUST00000176172 Fam168bQ80XQ8 194 aa11.15□□□□□ -0.63
Cux1-206ENSMUST00000176172 Rpl37aP61514 92 aa11.13□□□□□ -0.63
Cux1-206ENSMUST00000176172 Gm5617Q91VN2 117 aa11.13□□□□□ -0.63
Cux1-206ENSMUST00000176172 Hectd1Q69ZR2 2618 aaKnown RBP11.12□□□□□ -0.63
Cux1-206ENSMUST00000176172 7530416G11RikJ3QJX6 159 aa11.11□□□□□ -0.63
Cux1-206ENSMUST00000176172 Kmt2bO08550 2713 aa11.11□□□□□ -0.63
Cux1-206ENSMUST00000176172 Akap13E9Q394 2776 aa11.11□□□□□ -0.63
Cux1-206ENSMUST00000176172 UtrnE9Q6R7 3430 aa11.09□□□□□ -0.63
Cux1-206ENSMUST00000176172 Gm12216A0A1W2P827 62 aa11.09□□□□□ -0.63
Cux1-206ENSMUST00000176172 Nsd1O88491 2588 aaKnown RBP11.08□□□□□ -0.64
Cux1-206ENSMUST00000176172 Q8BGJ3 129 aa11.06□□□□□ -0.64
Cux1-206ENSMUST00000176172 Mast4Q811L6 2618 aa11.06□□□□□ -0.64
Cux1-206ENSMUST00000176172 1810062G17RikG3X8Y2 129 aa11.06□□□□□ -0.64
Cux1-206ENSMUST00000176172 Gm7276Q3TYW4 209 aa11.05□□□□□ -0.64
Cux1-206ENSMUST00000176172 Cdc42se1Q8BHL7 80 aa11.05□□□□□ -0.64
Cux1-206ENSMUST00000176172 Gm20661K7N787 53 aa11.04□□□□□ -0.64
Cux1-206ENSMUST00000176172 RetnlbQ99P86 105 aa11.03□□□□□ -0.64
Cux1-206ENSMUST00000176172 Itpr1P11881 2749 aa11.02□□□□□ -0.65
Cux1-206ENSMUST00000176172 Coa5Q99M07 74 aa11.01□□□□□ -0.65
Cux1-206ENSMUST00000176172 Prune2Q52KR3 3084 aa11.01□□□□□ -0.65
Cux1-206ENSMUST00000176172 C530025M09RikF6RGA8 229 aa10.99□□□□□ -0.65
Cux1-206ENSMUST00000176172 Stab1Q8R4Y4 2571 aa10.98□□□□□ -0.65
Cux1-206ENSMUST00000176172 Dnah12Q3V0Q1 3086 aa10.96□□□□□ -0.65
Cux1-206ENSMUST00000176172 Prr13Q9CQJ5 137 aa10.96□□□□□ -0.65
Cux1-206ENSMUST00000176172 Gm11213A0A1B0GR83 88 aa10.94□□□□□ -0.66
Cux1-206ENSMUST00000176172 TrioQ0KL02 3102 aa10.94□□□□□ -0.66
Cux1-206ENSMUST00000176172 Cep350E9Q309 3095 aa10.93□□□□□ -0.66
Cux1-206ENSMUST00000176172 Cypt15B1AXS0 87 aa10.92□□□□□ -0.66
Cux1-206ENSMUST00000176172 CnbpP53996 178 aaKnown RBP10.92□□□□□ -0.66
Cux1-206ENSMUST00000176172 NipblQ6KCD5 2798 aaKnown RBP10.92□□□□□ -0.66
Cux1-206ENSMUST00000176172 A330070K13RikQ8CA53 115 aa10.92□□□□□ -0.66
Cux1-206ENSMUST00000176172 Defb9Q8R2I6 67 aa10.91□□□□□ -0.66
Cux1-206ENSMUST00000176172 Chd6A3KFM7 2711 aa10.91□□□□□ -0.66
Cux1-206ENSMUST00000176172 Gm11565A2A4M7 156 aa10.91□□□□□ -0.66
Cux1-206ENSMUST00000176172 Defb1P56386 69 aa10.91□□□□□ -0.66
Cux1-206ENSMUST00000176172 Gm3233E9Q2H5 230 aa10.9□□□□□ -0.66
Cux1-206ENSMUST00000176172 Prrc2cQ3TLH4 2846 aaKnown RBP10.9□□□□□ -0.66
Cux1-206ENSMUST00000176172 HrnrQ8VHD8 2496 aa10.9□□□□□ -0.66
Cux1-206ENSMUST00000176172 Phxr4P15974 95 aa10.9□□□□□ -0.66
Cux1-206ENSMUST00000176172 Gm9195A0A140LHT4 2805 aa10.85□□□□□ -0.67
Cux1-206ENSMUST00000176172 Fam104aA2A6P4 185 aa10.84□□□□□ -0.67
Cux1-206ENSMUST00000176172 Zcchc13Q9D548 170 aa10.83□□□□□ -0.68
Cux1-206ENSMUST00000176172 Uqcr11Q9CPX8 56 aa10.83□□□□□ -0.68
Cux1-206ENSMUST00000176172 Dmbt1Q60997 2085 aa10.82□□□□□ -0.68
Cux1-206ENSMUST00000176172 Plac8Q9JI48 112 aa10.82□□□□□ -0.68
Cux1-206ENSMUST00000176172 OxtP35454 125 aa10.81□□□□□ -0.68
Cux1-206ENSMUST00000176172 Lelp1Q9DAE3 120 aa10.78□□□□□ -0.68
Cux1-206ENSMUST00000176172 Lama2Q60675 3118 aaKnown RBP10.78□□□□□ -0.68
Cux1-206ENSMUST00000176172 Anapc11Q9CPX9 84 aa10.76□□□□□ -0.69
Cux1-206ENSMUST00000176172 Map1aQ9QYR6 2776 aa10.75□□□□□ -0.69
Cux1-206ENSMUST00000176172 Gm26620Q9CY65 116 aa10.74□□□□□ -0.69
Cux1-206ENSMUST00000176172 Mp68P56379 58 aa10.73□□□□□ -0.69
Cux1-206ENSMUST00000176172 Tnrc18Q80WC3 2878 aa10.73□□□□□ -0.69
Cux1-206ENSMUST00000176172 Chtf8P0CG14 533 aa10.72□□□□□ -0.69
Cux1-206ENSMUST00000176172 Myo15bI7HPW8 3033 aa10.72□□□□□ -0.69
Cux1-206ENSMUST00000176172 Ubr5Q80TP3 2792 aa10.71□□□□□ -0.69
Cux1-206ENSMUST00000176172 Igsf10Q3V1M1 2594 aa10.69□□□□□ -0.7
Cux1-206ENSMUST00000176172 Phxr5P08399 672 aa10.67□□□□□ -0.7
Cux1-206ENSMUST00000176172 Gm10643Q3URG9 111 aa10.67□□□□□ -0.7
Cux1-206ENSMUST00000176172 Lama3Q61789 3330 aa10.67□□□□□ -0.7
Cux1-206ENSMUST00000176172 Gm10065F6TJM2 114 aa10.65□□□□□ -0.7
Cux1-206ENSMUST00000176172 Cypt14J3QPF7 87 aa10.64□□□□□ -0.71
Cux1-206ENSMUST00000176172 Itpr3P70227 2670 aa10.64□□□□□ -0.71
Cux1-206ENSMUST00000176172 Jbts17Q8CE72 3214 aa10.64□□□□□ -0.71
Cux1-206ENSMUST00000176172 Rnase13Q5GAM7 153 aa10.63□□□□□ -0.71
Cux1-206ENSMUST00000176172 Gm7138L7N2C3 230 aa10.62□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 48.9 ms