RNA–Protein interactions for RNA: ENSMUST00000108362.7

Sptbn4-202, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,861 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-202ENSMUST00000108362 Vps13aQ5H8C4 3166 aa11.13□□□□□ -0.63
Sptbn4-202ENSMUST00000108362 Igkv8-19A0A0G2JFN8 121 aa11.12□□□□□ -0.63
Sptbn4-202ENSMUST00000108362 Chchd10Q7TNL9 138 aa11.09□□□□□ -0.63
Sptbn4-202ENSMUST00000108362 Jbts17Q8CE72 3214 aa11.09□□□□□ -0.63
Sptbn4-202ENSMUST00000108362 Prune2Q52KR3 3084 aa11.09□□□□□ -0.63
Sptbn4-202ENSMUST00000108362 Gm10770F7D043 238 aa11.08□□□□□ -0.64
Sptbn4-202ENSMUST00000108362 Gm17689B3GLJ4 109 aa11.08□□□□□ -0.64
Sptbn4-202ENSMUST00000108362 Elof1P60003 83 aa11.08□□□□□ -0.64
Sptbn4-202ENSMUST00000108362 Gm9903Q8C9Y8 129 aa11.08□□□□□ -0.64
Sptbn4-202ENSMUST00000108362 Cfap54Q8C6S9 3106 aa11.07□□□□□ -0.64
Sptbn4-202ENSMUST00000108362 Defb50Q6TU36 73 aa11.05□□□□□ -0.64
Sptbn4-202ENSMUST00000108362 Gm10642Q3TWM1 71 aa11.04□□□□□ -0.64
Sptbn4-202ENSMUST00000108362 Gm10999F6Q4M4 69 aa11.04□□□□□ -0.64
Sptbn4-202ENSMUST00000108362 HrnrQ8VHD8 2496 aa11.04□□□□□ -0.64
Sptbn4-202ENSMUST00000108362 Limd2Q8BGB5 128 aa11.03□□□□□ -0.64
Sptbn4-202ENSMUST00000108362 Dmac1Q9CQ00 111 aa11.03□□□□□ -0.64
Sptbn4-202ENSMUST00000108362 Eif4ebp3Q80VV3 101 aa11.03□□□□□ -0.64
Sptbn4-202ENSMUST00000108362 Srsf12Q8C8K3 266 aa11.03□□□□□ -0.64
Sptbn4-202ENSMUST00000108362 Gm10308Q9CVR5 141 aa11.03□□□□□ -0.64
Sptbn4-202ENSMUST00000108362 Rev3lQ61493 3122 aa11.03□□□□□ -0.64
Sptbn4-202ENSMUST00000108362 Gm11627A6PWP4 55 aa11.02□□□□□ -0.64
Sptbn4-202ENSMUST00000108362 Kmt2bO08550 2713 aa11.02□□□□□ -0.64
Sptbn4-202ENSMUST00000108362 A930002H24RikQ8C8Y3 163 aa11.01□□□□□ -0.65
Sptbn4-202ENSMUST00000108362 Notch1Q01705 2531 aa11□□□□□ -0.65
Sptbn4-202ENSMUST00000108362 Gm12216A0A1W2P827 62 aa11□□□□□ -0.65
Sptbn4-202ENSMUST00000108362 Gm5617Q91VN2 117 aa11□□□□□ -0.65
Sptbn4-202ENSMUST00000108362 AtrQ9JKK8 2635 aa11□□□□□ -0.65
Sptbn4-202ENSMUST00000108362 Akap13E9Q394 2776 aa10.99□□□□□ -0.65
Sptbn4-202ENSMUST00000108362 Rpl37aP61514 92 aa10.99□□□□□ -0.65
Sptbn4-202ENSMUST00000108362 Gm17606F6ZL36 78 aa10.98□□□□□ -0.65
Sptbn4-202ENSMUST00000108362 Cdc42se1Q8BHL7 80 aa10.98□□□□□ -0.65
Sptbn4-202ENSMUST00000108362 Defb10Q8R2I8 73 aa10.98□□□□□ -0.65
Sptbn4-202ENSMUST00000108362 Gm16181B0V2H2 73 aa10.97□□□□□ -0.65
Sptbn4-202ENSMUST00000108362 Gm20661K7N787 53 aa10.97□□□□□ -0.65
Sptbn4-202ENSMUST00000108362 Gm26661M0QWV4 156 aa10.96□□□□□ -0.65
Sptbn4-202ENSMUST00000108362 AI606181Q8C7B9 129 aa10.96□□□□□ -0.65
Sptbn4-202ENSMUST00000108362 E130208F15RikQ3UPV3 143 aa10.96□□□□□ -0.66
Sptbn4-202ENSMUST00000108362 Gm10772F7AIG4 85 aa10.94□□□□□ -0.66
Sptbn4-202ENSMUST00000108362 Coa5Q99M07 74 aa10.94□□□□□ -0.66
Sptbn4-202ENSMUST00000108362 Gm28374F6SG70 93 aa10.93□□□□□ -0.66
Sptbn4-202ENSMUST00000108362 Q8BT88 171 aa10.91□□□□□ -0.66
Sptbn4-202ENSMUST00000108362 Gcn1E9PVA8 2671 aaKnown RBP10.91□□□□□ -0.66
Sptbn4-202ENSMUST00000108362 Phf5aP83870 110 aaKnown RBP10.91□□□□□ -0.66
Sptbn4-202ENSMUST00000108362 Gm3250E9Q1M3 230 aa10.9□□□□□ -0.66
Sptbn4-202ENSMUST00000108362 Snhg11Q4G0K9 87 aa10.9□□□□□ -0.66
Sptbn4-202ENSMUST00000108362 Defb1P56386 69 aa10.89□□□□□ -0.67
Sptbn4-202ENSMUST00000108362 AplnQ9R0R4 77 aa10.88□□□□□ -0.67
Sptbn4-202ENSMUST00000108362 Krtap26-1Q9D7N2 215 aa10.87□□□□□ -0.67
Sptbn4-202ENSMUST00000108362 Dmbt1Q60997 2085 aa10.87□□□□□ -0.67
Sptbn4-202ENSMUST00000108362 Spaca4Q80ZQ0 127 aa10.86□□□□□ -0.67
Sptbn4-202ENSMUST00000108362 Gpr15lA0A0B4J1N3 78 aa10.85□□□□□ -0.67
Sptbn4-202ENSMUST00000108362 Phxr4P15974 95 aa10.83□□□□□ -0.68
Sptbn4-202ENSMUST00000108362 Krtap24-1G3X9A2 248 aa10.83□□□□□ -0.68
Sptbn4-202ENSMUST00000108362 Ankrd17Q99NH0 2603 aaKnown RBP10.83□□□□□ -0.68
Sptbn4-202ENSMUST00000108362 1810062G17RikG3X8Y2 129 aa10.82□□□□□ -0.68
Sptbn4-202ENSMUST00000108362 Q8BGJ3 129 aa10.82□□□□□ -0.68
Sptbn4-202ENSMUST00000108362 Psors1c2Q80ZC9 134 aa10.82□□□□□ -0.68
Sptbn4-202ENSMUST00000108362 Znf414Q9DCK4 299 aa10.82□□□□□ -0.68
Sptbn4-202ENSMUST00000108362 Prol1E9PYQ4 312 aa10.81□□□□□ -0.68
Sptbn4-202ENSMUST00000108362 Gm10837Q3UTT8 145 aa10.81□□□□□ -0.68
Sptbn4-202ENSMUST00000108362 4930507D05RikQ8C9C9 103 aa10.81□□□□□ -0.68
Sptbn4-202ENSMUST00000108362 Mast4Q811L6 2618 aa10.81□□□□□ -0.68
Sptbn4-202ENSMUST00000108362 Brca2P97929 3329 aa10.81□□□□□ -0.68
Sptbn4-202ENSMUST00000108362 Frem2Q6NVD0 3160 aa10.81□□□□□ -0.68
Sptbn4-202ENSMUST00000108362 Fam168bQ80XQ8 194 aa10.8□□□□□ -0.68
Sptbn4-202ENSMUST00000108362 Prrc2cQ3TLH4 2846 aaKnown RBP10.8□□□□□ -0.68
Sptbn4-202ENSMUST00000108362 Nsd1O88491 2588 aaKnown RBP10.8□□□□□ -0.68
Sptbn4-202ENSMUST00000108362 AY074887Q8R5F9 132 aa10.79□□□□□ -0.68
Sptbn4-202ENSMUST00000108362 Phxr5P08399 672 aa10.78□□□□□ -0.68
Sptbn4-202ENSMUST00000108362 Mp68P56379 58 aa10.78□□□□□ -0.68
Sptbn4-202ENSMUST00000108362 A330070K13RikQ8CA53 115 aa10.78□□□□□ -0.68
Sptbn4-202ENSMUST00000108362 AspmQ8CJ27 3122 aa10.77□□□□□ -0.69
Sptbn4-202ENSMUST00000108362 Bod1lE9Q6J5 3032 aa10.76□□□□□ -0.69
Sptbn4-202ENSMUST00000108362 AtmQ62388 3066 aa10.76□□□□□ -0.69
Sptbn4-202ENSMUST00000108362 Krtap11-1E9Q2E9 183 aa10.76□□□□□ -0.69
Sptbn4-202ENSMUST00000108362 Sprr4Q8CGN8 76 aa10.75□□□□□ -0.69
Sptbn4-202ENSMUST00000108362 Ranbp2Q9ERU9 3053 aaKnown RBP10.75□□□□□ -0.69
Sptbn4-202ENSMUST00000108362 Gm27235Q3UW50 83 aa10.72□□□□□ -0.69
Sptbn4-202ENSMUST00000108362 Gm11213A0A1B0GR83 88 aa10.72□□□□□ -0.69
Sptbn4-202ENSMUST00000108362 FrylF8VQ05 3007 aa10.71□□□□□ -0.69
Sptbn4-202ENSMUST00000108362 Wdfy3Q6VNB8 3508 aa10.7□□□□□ -0.7
Sptbn4-202ENSMUST00000108362 Lama1P19137 3084 aa10.69□□□□□ -0.7
Sptbn4-202ENSMUST00000108362 MgaA2AWL7 3003 aaKnown RBP10.68□□□□□ -0.7
Sptbn4-202ENSMUST00000108362 Fam229bQ8CF36 80 aa10.67□□□□□ -0.7
Sptbn4-202ENSMUST00000108362 Chd6A3KFM7 2711 aa10.67□□□□□ -0.7
Sptbn4-202ENSMUST00000108362 Lrrc37aB1AWG4 3215 aa10.66□□□□□ -0.7
Sptbn4-202ENSMUST00000108362 Hectd1Q69ZR2 2618 aaKnown RBP10.66□□□□□ -0.7
Sptbn4-202ENSMUST00000108362 FlnaQ8BTM8 2647 aaKnown RBP10.65□□□□□ -0.7
Sptbn4-202ENSMUST00000108362 Myo15bI7HPW8 3033 aa10.63□□□□□ -0.71
Sptbn4-202ENSMUST00000108362 C530025M09RikF6RGA8 229 aa10.63□□□□□ -0.71
Sptbn4-202ENSMUST00000108362 Gm10643Q3URG9 111 aa10.62□□□□□ -0.71
Sptbn4-202ENSMUST00000108362 Sprr1bQ62267 153 aa10.62□□□□□ -0.71
Sptbn4-202ENSMUST00000108362 Uqcr11Q9CPX8 56 aa10.62□□□□□ -0.71
Sptbn4-202ENSMUST00000108362 Chtf8P0CG14 533 aa10.62□□□□□ -0.71
Sptbn4-202ENSMUST00000108362 Lypd5Q9D7Z7 256 aa10.61□□□□□ -0.71
Sptbn4-202ENSMUST00000108362 DmdP11531 3678 aa10.61□□□□□ -0.71
Sptbn4-202ENSMUST00000108362 Itpr1P11881 2749 aa10.6□□□□□ -0.71
Sptbn4-202ENSMUST00000108362 Map1aQ9QYR6 2776 aa10.58□□□□□ -0.72
Sptbn4-202ENSMUST00000108362 RetnlbQ99P86 105 aa10.58□□□□□ -0.72
Sptbn4-202ENSMUST00000108362 CnbpP53996 178 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 7.7 ms