RNA–Protein interactions for RNA: ENSMUST00000042724.7

Usp38-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 38, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usp38, Length 4,707 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp38-201ENSMUST00000042724 Defb50Q6TU36 73 aa10.21□□□□□ -0.77
Usp38-201ENSMUST00000042724 Znf414Q9DCK4 299 aa10.21□□□□□ -0.77
Usp38-201ENSMUST00000042724 Sprr1bQ62267 153 aa10.21□□□□□ -0.78
Usp38-201ENSMUST00000042724 Szt2A2A9C3 3431 aa10.2□□□□□ -0.78
Usp38-201ENSMUST00000042724 1700074P13RikQ9D9G7 251 aa10.2□□□□□ -0.78
Usp38-201ENSMUST00000042724 Igkv8-27A0A0G2JF28 120 aa10.19□□□□□ -0.78
Usp38-201ENSMUST00000042724 Wfdc17Q5SSJ1 76 aa10.19□□□□□ -0.78
Usp38-201ENSMUST00000042724 Gm10642Q3TWM1 71 aa10.19□□□□□ -0.78
Usp38-201ENSMUST00000042724 Gm19935A0A1B0GSF9 52 aa10.19□□□□□ -0.78
Usp38-201ENSMUST00000042724 Gm10267M0QWD8 85 aa10.19□□□□□ -0.78
Usp38-201ENSMUST00000042724 Pou2af1Q64693 256 aa10.19□□□□□ -0.78
Usp38-201ENSMUST00000042724 Sprr4Q8CGN8 76 aa10.18□□□□□ -0.78
Usp38-201ENSMUST00000042724 6430550D23RikE9Q1X6 194 aa10.18□□□□□ -0.78
Usp38-201ENSMUST00000042724 Wfdc3Q14AE4 130 aa10.16□□□□□ -0.78
Usp38-201ENSMUST00000042724 Eif4ebp3Q80VV3 101 aa10.16□□□□□ -0.78
Usp38-201ENSMUST00000042724 Mrpl34Q99N91 92 aa10.16□□□□□ -0.78
Usp38-201ENSMUST00000042724 Phf5aP83870 110 aaKnown RBP10.15□□□□□ -0.78
Usp38-201ENSMUST00000042724 Notch1Q01705 2531 aa10.15□□□□□ -0.78
Usp38-201ENSMUST00000042724 Ighv2-2A0A075B5P8 116 aa10.15□□□□□ -0.78
Usp38-201ENSMUST00000042724 P01821 116 aa10.15□□□□□ -0.78
Usp38-201ENSMUST00000042724 Stab1Q8R4Y4 2571 aa10.15□□□□□ -0.78
Usp38-201ENSMUST00000042724 1700018G05RikA0A1B0GSI2 66 aa10.15□□□□□ -0.78
Usp38-201ENSMUST00000042724 H2al1bA0A087WP11 105 aa10.14□□□□□ -0.79
Usp38-201ENSMUST00000042724 Reg3aO09037 175 aa10.14□□□□□ -0.79
Usp38-201ENSMUST00000042724 Sec61gP60060 68 aa10.14□□□□□ -0.79
Usp38-201ENSMUST00000042724 NipblQ6KCD5 2798 aaKnown RBP10.13□□□□□ -0.79
Usp38-201ENSMUST00000042724 Defb39Q70KL3 74 aa10.13□□□□□ -0.79
Usp38-201ENSMUST00000042724 Ash1lQ99MY8 2958 aa10.13□□□□□ -0.79
Usp38-201ENSMUST00000042724 Apoc4Q61268 124 aa10.12□□□□□ -0.79
Usp38-201ENSMUST00000042724 Igkv3-7A0A0G2JE31 119 aa10.11□□□□□ -0.79
Usp38-201ENSMUST00000042724 AY074887Q8R5F9 132 aa10.11□□□□□ -0.79
Usp38-201ENSMUST00000042724 Vps13aQ5H8C4 3166 aa10.11□□□□□ -0.79
Usp38-201ENSMUST00000042724 Dmbt1Q60997 2085 aa10.1□□□□□ -0.79
Usp38-201ENSMUST00000042724 Sox16Q62247 57 aa10.1□□□□□ -0.79
Usp38-201ENSMUST00000042724 H2al1aQ5M8Q2 105 aa10.09□□□□□ -0.79
Usp38-201ENSMUST00000042724 H2al1eQ810S6 105 aa10.09□□□□□ -0.79
Usp38-201ENSMUST00000042724 Gm10770F7D043 238 aa10.09□□□□□ -0.79
Usp38-201ENSMUST00000042724 Gm21886J3QJU9 214 aa10.09□□□□□ -0.79
Usp38-201ENSMUST00000042724 Defb38Q7TNV7 63 aa10.09□□□□□ -0.79
Usp38-201ENSMUST00000042724 AtmQ62388 3066 aa10.08□□□□□ -0.8
Usp38-201ENSMUST00000042724 Ranbp2Q9ERU9 3053 aaKnown RBP10.08□□□□□ -0.8
Usp38-201ENSMUST00000042724 Fam168bQ80XQ8 194 aa10.07□□□□□ -0.8
Usp38-201ENSMUST00000042724 4930518I15RikQ3V2W7 57 aa10.07□□□□□ -0.8
Usp38-201ENSMUST00000042724 Nsd1O88491 2588 aaKnown RBP10.06□□□□□ -0.8
Usp38-201ENSMUST00000042724 Ndufb1P0DN34 57 aa10.06□□□□□ -0.8
Usp38-201ENSMUST00000042724 Gm44790A0A0N4SV91 103 aa10.06□□□□□ -0.8
Usp38-201ENSMUST00000042724 Serp1Q9Z1W5 66 aa10.06□□□□□ -0.8
Usp38-201ENSMUST00000042724 Fn1P11276 2477 aaKnown RBP10.05□□□□□ -0.8
Usp38-201ENSMUST00000042724 C530025M09RikF6RGA8 229 aa10.05□□□□□ -0.8
Usp38-201ENSMUST00000042724 Gm27235Q3UW50 83 aa10.05□□□□□ -0.8
Usp38-201ENSMUST00000042724 AI606181Q8C7B9 129 aa10.04□□□□□ -0.8
Usp38-201ENSMUST00000042724 Coa6Q8BGD8 79 aa10.04□□□□□ -0.8
Usp38-201ENSMUST00000042724 Mast4Q811L6 2618 aa10.03□□□□□ -0.8
Usp38-201ENSMUST00000042724 Gm10308Q9CVR5 141 aa10.02□□□□□ -0.8
Usp38-201ENSMUST00000042724 Gm10570F6VB42 170 aa10.02□□□□□ -0.81
Usp38-201ENSMUST00000042724 Gm7138L7N2C3 230 aa10.02□□□□□ -0.81
Usp38-201ENSMUST00000042724 Gm3238W4VSP7 230 aa10.02□□□□□ -0.81
Usp38-201ENSMUST00000042724 Muc2Q80Z19 2680 aa10.01□□□□□ -0.81
Usp38-201ENSMUST00000042724 SnurfQ9WU12 71 aa10.01□□□□□ -0.81
Usp38-201ENSMUST00000042724 Itpr3P70227 2670 aa10.01□□□□□ -0.81
Usp38-201ENSMUST00000042724 Lrrc37aB1AWG4 3215 aa10□□□□□ -0.81
Usp38-201ENSMUST00000042724 Phxr5P08399 672 aa10□□□□□ -0.81
Usp38-201ENSMUST00000042724 Igkv8-19A0A0G2JFN8 121 aa9.99□□□□□ -0.81
Usp38-201ENSMUST00000042724 Akap13E9Q394 2776 aa9.99□□□□□ -0.81
Usp38-201ENSMUST00000042724 Q8BT88 171 aa9.97□□□□□ -0.81
Usp38-201ENSMUST00000042724 AspmQ8CJ27 3122 aa9.96□□□□□ -0.82
Usp38-201ENSMUST00000042724 Ndufs5Q99LY9 106 aa9.95□□□□□ -0.82
Usp38-201ENSMUST00000042724 CnbpP53996 178 aaKnown RBP9.95□□□□□ -0.82
Usp38-201ENSMUST00000042724 Gm7276Q3TYW4 209 aa9.95□□□□□ -0.82
Usp38-201ENSMUST00000042724 Gpr15lA0A0B4J1N3 78 aa9.95□□□□□ -0.82
Usp38-201ENSMUST00000042724 Gm11213A0A1B0GR83 88 aa9.95□□□□□ -0.82
Usp38-201ENSMUST00000042724 Unc80Q8BLN6 3261 aa9.95□□□□□ -0.82
Usp38-201ENSMUST00000042724 Krtap16-1A2A5X5 502 aa9.94□□□□□ -0.82
Usp38-201ENSMUST00000042724 Gm5617Q91VN2 117 aa9.94□□□□□ -0.82
Usp38-201ENSMUST00000042724 A930002H24RikQ8C8Y3 163 aa9.94□□□□□ -0.82
Usp38-201ENSMUST00000042724 Gm17689B3GLJ4 109 aa9.93□□□□□ -0.82
Usp38-201ENSMUST00000042724 Gm7137J3QMW1 236 aa9.91□□□□□ -0.82
Usp38-201ENSMUST00000042724 Spaca4Q80ZQ0 127 aa9.89□□□□□ -0.83
Usp38-201ENSMUST00000042724 Ubr5Q80TP3 2792 aa9.89□□□□□ -0.83
Usp38-201ENSMUST00000042724 Gm10337F7DEP7 55 aa9.88□□□□□ -0.83
Usp38-201ENSMUST00000042724 Igsf10Q3V1M1 2594 aa9.88□□□□□ -0.83
Usp38-201ENSMUST00000042724 Gm10160F6Y577 67 aa9.87□□□□□ -0.83
Usp38-201ENSMUST00000042724 OxtP35454 125 aa9.87□□□□□ -0.83
Usp38-201ENSMUST00000042724 Plac8Q9JI48 112 aa9.87□□□□□ -0.83
Usp38-201ENSMUST00000042724 Defb9Q8R2I6 67 aa9.86□□□□□ -0.83
Usp38-201ENSMUST00000042724 7530416G11RikJ3QJX6 159 aa9.85□□□□□ -0.83
Usp38-201ENSMUST00000042724 Rpl37aP61514 92 aa9.84□□□□□ -0.83
Usp38-201ENSMUST00000042724 Wdfy4E9Q2M9 3149 aa9.84□□□□□ -0.83
Usp38-201ENSMUST00000042724 RetnlbQ99P86 105 aa9.84□□□□□ -0.83
Usp38-201ENSMUST00000042724 Chd6A3KFM7 2711 aa9.83□□□□□ -0.84
Usp38-201ENSMUST00000042724 Zcchc13Q9D548 170 aa9.82□□□□□ -0.84
Usp38-201ENSMUST00000042724 FrylF8VQ05 3007 aa9.81□□□□□ -0.84
Usp38-201ENSMUST00000042724 Gm10197F6QEY5 67 aa9.8□□□□□ -0.84
Usp38-201ENSMUST00000042724 Fam104aA2A6P4 185 aa9.79□□□□□ -0.84
Usp38-201ENSMUST00000042724 Lama1P19137 3084 aa9.78□□□□□ -0.84
Usp38-201ENSMUST00000042724 SvipQ3UZP4 77 aa9.78□□□□□ -0.84
Usp38-201ENSMUST00000042724 A330070K13RikQ8CA53 115 aa9.78□□□□□ -0.84
Usp38-201ENSMUST00000042724 Prr13Q9CQJ5 137 aa9.76□□□□□ -0.85
Usp38-201ENSMUST00000042724 Rps28P62858 69 aaKnown RBP9.76□□□□□ -0.85
Usp38-201ENSMUST00000042724 Col6a5A6H584 2640 aa9.74□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 48.5 ms