RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Ankrd11E9Q4F7 2643 aa9.64□□□□□ -0.87
Col5a1-201ENSMUST00000028280 Gm26661M0QWV4 156 aa9.64□□□□□ -0.87
Col5a1-201ENSMUST00000028280 7530416G11RikJ3QJX6 159 aa9.63□□□□□ -0.87
Col5a1-201ENSMUST00000028280 Phxr4P15974 95 aa9.63□□□□□ -0.87
Col5a1-201ENSMUST00000028280 Gm9903Q8C9Y8 129 aa9.62□□□□□ -0.87
Col5a1-201ENSMUST00000028280 Pla2g10Q9QXX3 151 aa9.62□□□□□ -0.87
Col5a1-201ENSMUST00000028280 Gpr15lA0A0B4J1N3 78 aa9.61□□□□□ -0.87
Col5a1-201ENSMUST00000028280 CriptO70333 101 aa9.61□□□□□ -0.87
Col5a1-201ENSMUST00000028280 Spaca4Q80ZQ0 127 aa9.59□□□□□ -0.87
Col5a1-201ENSMUST00000028280 Gm17689B3GLJ4 109 aa9.57□□□□□ -0.88
Col5a1-201ENSMUST00000028280 Chd8Q09XV5 2582 aaKnown RBP9.56□□□□□ -0.88
Col5a1-201ENSMUST00000028280 FasnP19096 2504 aaKnown RBP9.55□□□□□ -0.88
Col5a1-201ENSMUST00000028280 Gm27235Q3UW50 83 aa9.54□□□□□ -0.88
Col5a1-201ENSMUST00000028280 Gm16181B0V2H2 73 aa9.53□□□□□ -0.88
Col5a1-201ENSMUST00000028280 Phf5aP83870 110 aaKnown RBP9.53□□□□□ -0.88
Col5a1-201ENSMUST00000028280 Cep192E9Q4Y4 2514 aaKnown RBP9.51□□□□□ -0.89
Col5a1-201ENSMUST00000028280 Q8BT88 171 aa9.51□□□□□ -0.89
Col5a1-201ENSMUST00000028280 Psors1c2Q80ZC9 134 aa9.5□□□□□ -0.89
Col5a1-201ENSMUST00000028280 MobpQ9D2P8 170 aa9.5□□□□□ -0.89
Col5a1-201ENSMUST00000028280 SrcapA0A087WQ44 3271 aa9.46□□□□□ -0.89
Col5a1-201ENSMUST00000028280 E130208F15RikQ3UPV3 143 aa9.46□□□□□ -0.89
Col5a1-201ENSMUST00000028280 Srsf12Q8C8K3 266 aa9.44□□□□□ -0.9
Col5a1-201ENSMUST00000028280 Gm5617Q91VN2 117 aa9.43□□□□□ -0.9
Col5a1-201ENSMUST00000028280 Snhg11Q4G0K9 87 aa9.41□□□□□ -0.9
Col5a1-201ENSMUST00000028280 Defb11Q8R2I7 77 aa9.4□□□□□ -0.9
Col5a1-201ENSMUST00000028280 Gm10837Q3UTT8 145 aa9.39□□□□□ -0.91
Col5a1-201ENSMUST00000028280 Fam168bQ80XQ8 194 aa9.37□□□□□ -0.91
Col5a1-201ENSMUST00000028280 Gm11213A0A1B0GR83 88 aa9.36□□□□□ -0.91
Col5a1-201ENSMUST00000028280 Fn1P11276 2477 aaKnown RBP9.36□□□□□ -0.91
Col5a1-201ENSMUST00000028280 Myo18bE9PV66 2605 aa9.35□□□□□ -0.91
Col5a1-201ENSMUST00000028280 CicQ924A2 2510 aa9.33□□□□□ -0.92
Col5a1-201ENSMUST00000028280 Krtap26-1Q9D7N2 215 aa9.31□□□□□ -0.92
Col5a1-201ENSMUST00000028280 SetxA2AKX3 2646 aa9.31□□□□□ -0.92
Col5a1-201ENSMUST00000028280 Gm21798J3QNU5 87 aa9.3□□□□□ -0.92
Col5a1-201ENSMUST00000028280 Gm10772F7AIG4 85 aa9.29□□□□□ -0.92
Col5a1-201ENSMUST00000028280 Cypt15B1AXS0 87 aa9.27□□□□□ -0.93
Col5a1-201ENSMUST00000028280 Unc79Q0KK59 2596 aa9.26□□□□□ -0.93
Col5a1-201ENSMUST00000028280 Chtf8P0CG14 533 aa9.25□□□□□ -0.93
Col5a1-201ENSMUST00000028280 Golgb1E9PVZ8 3238 aa9.25□□□□□ -0.93
Col5a1-201ENSMUST00000028280 Gm3880A0A1B0GSB3 72 aa9.24□□□□□ -0.93
Col5a1-201ENSMUST00000028280 A330070K13RikQ8CA53 115 aa9.23□□□□□ -0.93
Col5a1-201ENSMUST00000028280 Abca12E9Q876 2595 aa9.22□□□□□ -0.93
Col5a1-201ENSMUST00000028280 Akap13E9Q394 2776 aa9.22□□□□□ -0.93
Col5a1-201ENSMUST00000028280 Krtap24-1G3X9A2 248 aa9.22□□□□□ -0.93
Col5a1-201ENSMUST00000028280 Sprr4Q8CGN8 76 aa9.21□□□□□ -0.94
Col5a1-201ENSMUST00000028280 Gm7276Q3TYW4 209 aa9.2□□□□□ -0.94
Col5a1-201ENSMUST00000028280 AY074887Q8R5F9 132 aa9.2□□□□□ -0.94
Col5a1-201ENSMUST00000028280 2310034C09RikQ9D746 214 aa9.2□□□□□ -0.94
Col5a1-201ENSMUST00000028280 AW011738F6S7Q2 159 aa9.19□□□□□ -0.94
Col5a1-201ENSMUST00000028280 1810062G17RikG3X8Y2 129 aa9.19□□□□□ -0.94
Col5a1-201ENSMUST00000028280 Gm9955Q8CEJ8 102 aa9.19□□□□□ -0.94
Col5a1-201ENSMUST00000028280 Eif4ebp3Q80VV3 101 aa9.18□□□□□ -0.94
Col5a1-201ENSMUST00000028280 Bahcc1Q3UHR0 2643 aa9.18□□□□□ -0.94
Col5a1-201ENSMUST00000028280 Krtap11-1E9Q2E9 183 aa9.18□□□□□ -0.94
Col5a1-201ENSMUST00000028280 Lypd5Q9D7Z7 256 aa9.18□□□□□ -0.94
Col5a1-201ENSMUST00000028280 Spata3Q9D9T6 193 aa9.17□□□□□ -0.94
Col5a1-201ENSMUST00000028280 Jbts17Q8CE72 3214 aa9.16□□□□□ -0.94
Col5a1-201ENSMUST00000028280 Gm26620Q9CY65 116 aa9.14□□□□□ -0.95
Col5a1-201ENSMUST00000028280 Spink7Q6IE32 76 aa9.13□□□□□ -0.95
Col5a1-201ENSMUST00000028280 Prrc2cQ3TLH4 2846 aaKnown RBP9.12□□□□□ -0.95
Col5a1-201ENSMUST00000028280 PcntP48725 2898 aa9.12□□□□□ -0.95
Col5a1-201ENSMUST00000028280 Sprr1bQ62267 153 aa9.11□□□□□ -0.95
Col5a1-201ENSMUST00000028280 CnbpP53996 178 aaKnown RBP9.1□□□□□ -0.95
Col5a1-201ENSMUST00000028280 Dnah12Q3V0Q1 3086 aa9.08□□□□□ -0.96
Col5a1-201ENSMUST00000028280 Fam229bQ8CF36 80 aa9.07□□□□□ -0.96
Col5a1-201ENSMUST00000028280 Stab1Q8R4Y4 2571 aa9.06□□□□□ -0.96
Col5a1-201ENSMUST00000028280 Defb9Q8R2I6 67 aa9.04□□□□□ -0.96
Col5a1-201ENSMUST00000028280 Gm42715A0A087WP63 3095 aaKnown RBP9.04□□□□□ -0.96
Col5a1-201ENSMUST00000028280 Anapc11Q9CPX9 84 aa9.03□□□□□ -0.96
Col5a1-201ENSMUST00000028280 Notch1Q01705 2531 aa9.02□□□□□ -0.96
Col5a1-201ENSMUST00000028280 Gm3285A0A1W2P7U0 201 aa9.02□□□□□ -0.97
Col5a1-201ENSMUST00000028280 Nsd1O88491 2588 aaKnown RBP9.01□□□□□ -0.97
Col5a1-201ENSMUST00000028280 Hectd1Q69ZR2 2618 aaKnown RBP9.01□□□□□ -0.97
Col5a1-201ENSMUST00000028280 C530025M09RikF6RGA8 229 aa8.99□□□□□ -0.97
Col5a1-201ENSMUST00000028280 6030445D17RikE9Q8F9 148 aa8.99□□□□□ -0.97
Col5a1-201ENSMUST00000028280 Gm9821Q8K076 103 aa8.99□□□□□ -0.97
Col5a1-201ENSMUST00000028280 Fam104aA2A6P4 185 aa8.92□□□□□ -0.98
Col5a1-201ENSMUST00000028280 UtrnE9Q6R7 3430 aa8.91□□□□□ -0.98
Col5a1-201ENSMUST00000028280 Camk2n1Q6QWF9 78 aa8.91□□□□□ -0.98
Col5a1-201ENSMUST00000028280 Zfp292Q9Z2U2 2698 aa8.91□□□□□ -0.98
Col5a1-201ENSMUST00000028280 Map1aQ9QYR6 2776 aa8.9□□□□□ -0.99
Col5a1-201ENSMUST00000028280 Gm9195A0A140LHT4 2805 aa8.89□□□□□ -0.99
Col5a1-201ENSMUST00000028280 Gm4491E0CX42 125 aa8.89□□□□□ -0.99
Col5a1-201ENSMUST00000028280 CenpfE9Q3P4 2997 aaKnown RBP8.89□□□□□ -0.99
Col5a1-201ENSMUST00000028280 Zcchc13Q9D548 170 aa8.88□□□□□ -0.99
Col5a1-201ENSMUST00000028280 AtrQ9JKK8 2635 aa8.87□□□□□ -0.99
Col5a1-201ENSMUST00000028280 Gcn1E9PVA8 2671 aaKnown RBP8.86□□□□□ -0.99
Col5a1-201ENSMUST00000028280 FlnaQ8BTM8 2647 aaKnown RBP8.85□□□□□ -0.99
Col5a1-201ENSMUST00000028280 OxtP35454 125 aa8.84□□□□□ -0.99
Col5a1-201ENSMUST00000028280 Cypt14J3QPF7 87 aa8.83□□□□□ -1
Col5a1-201ENSMUST00000028280 9530053A07RikE9PVG8 2581 aa8.83□□□□□ -1
Col5a1-201ENSMUST00000028280 Gm3646F6S692 53 aa8.82□□□□□ -1
Col5a1-201ENSMUST00000028280 Plac8Q9JI48 112 aa8.79□□□□□ -1
Col5a1-201ENSMUST00000028280 Ep400Q8CHI8 3072 aaKnown RBP8.78□□□□□ -1
Col5a1-201ENSMUST00000028280 Cep350E9Q309 3095 aa8.78□□□□□ -1
Col5a1-201ENSMUST00000028280 Romo1P60603 79 aa8.77□□□□□ -1.01
Col5a1-201ENSMUST00000028280 Smim29Q8R043 75 aa8.77□□□□□ -1.01
Col5a1-201ENSMUST00000028280 Gm3250E9Q1M3 230 aa8.76□□□□□ -1.01
Col5a1-201ENSMUST00000028280 FlnbQ80X90 2602 aaKnown RBP8.75□□□□□ -1.01
Col5a1-201ENSMUST00000028280 Odf3bQ5M8M2 238 aa8.72□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 58.6 ms