RNA–Protein interactions for RNA: ENSMUST00000115345.7

Syn1-202, Transcript of Synapsin-1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Syn1, Length 3,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1-202ENSMUST00000115345 FlncQ8VHX6 2726 aaKnown RBP10.11□□□□□ -0.79
Syn1-202ENSMUST00000115345 Igkv4-70A0A0B4J1I5 116 aa10.1□□□□□ -0.79
Syn1-202ENSMUST00000115345 Ighv1-11A0A0A6YWI9 117 aa10.1□□□□□ -0.79
Syn1-202ENSMUST00000115345 Gm5142Q8C5X9 133 aa10.1□□□□□ -0.79
Syn1-202ENSMUST00000115345 Celsr2Q9R0M0 2920 aa10.09□□□□□ -0.79
Syn1-202ENSMUST00000115345 Igkv8-26A0A075B5N5 123 aa10.09□□□□□ -0.79
Syn1-202ENSMUST00000115345 Odf1Q61999 247 aa10.09□□□□□ -0.79
Syn1-202ENSMUST00000115345 Gm12216A0A1W2P827 62 aa10.09□□□□□ -0.79
Syn1-202ENSMUST00000115345 Gm10542F6XDR3 90 aa10.08□□□□□ -0.8
Syn1-202ENSMUST00000115345 Spink4O35679 86 aa10.08□□□□□ -0.8
Syn1-202ENSMUST00000115345 Gm10518F6UQQ9 182 aa10.07□□□□□ -0.8
Syn1-202ENSMUST00000115345 Igkv1-99F6XWB2 120 aa10.07□□□□□ -0.8
Syn1-202ENSMUST00000115345 U90926O08546 118 aa10.07□□□□□ -0.8
Syn1-202ENSMUST00000115345 Trav9-4A0A0B4J1K2 113 aa10.06□□□□□ -0.8
Syn1-202ENSMUST00000115345 E030018B13RikJ3QMS9 113 aa10.06□□□□□ -0.8
Syn1-202ENSMUST00000115345 Ankhd1E9PUR0 2548 aaKnown RBP10.06□□□□□ -0.8
Syn1-202ENSMUST00000115345 Krtap11-1E9Q2E9 183 aa10.06□□□□□ -0.8
Syn1-202ENSMUST00000115345 Ighv1-82A0A0G2JEU7 117 aa10.06□□□□□ -0.8
Syn1-202ENSMUST00000115345 Utp20Q5XG71 2788 aaKnown RBP10.05□□□□□ -0.8
Syn1-202ENSMUST00000115345 Trav9d-3A0A075B695 113 aa10.05□□□□□ -0.8
Syn1-202ENSMUST00000115345 Igkv3-1A0A075B5P1 119 aa10.05□□□□□ -0.8
Syn1-202ENSMUST00000115345 Ighv2-2A0A075B5P8 116 aa10.05□□□□□ -0.8
Syn1-202ENSMUST00000115345 Ighv2-9A0A075B5Q5 116 aa10.05□□□□□ -0.8
Syn1-202ENSMUST00000115345 P01821 116 aa10.05□□□□□ -0.8
Syn1-202ENSMUST00000115345 Atp6v0e1Q9CQD8 81 aa10.04□□□□□ -0.8
Syn1-202ENSMUST00000115345 Gm9970F6ZED4 185 aa10.04□□□□□ -0.8
Syn1-202ENSMUST00000115345 Wfdc15bQ9JHY4 80 aa10.04□□□□□ -0.8
Syn1-202ENSMUST00000115345 MobpQ9D2P8 170 aa10.03□□□□□ -0.8
Syn1-202ENSMUST00000115345 Igkv4-92A0A0B4J1I2 117 aa10.02□□□□□ -0.8
Syn1-202ENSMUST00000115345 Prok1Q14A28 105 aa10.02□□□□□ -0.8
Syn1-202ENSMUST00000115345 Gm9195A0A140LHT4 2805 aa10.02□□□□□ -0.8
Syn1-202ENSMUST00000115345 3110021N24RikJ3QMN2 152 aa10.01□□□□□ -0.81
Syn1-202ENSMUST00000115345 Cd52Q64389 74 aa10.01□□□□□ -0.81
Syn1-202ENSMUST00000115345 Igfn1Q3KNY0 2849 aa10.01□□□□□ -0.81
Syn1-202ENSMUST00000115345 Prr15lQ8JZM2 100 aa10.01□□□□□ -0.81
Syn1-202ENSMUST00000115345 SptssbQ925E8 76 aa10.01□□□□□ -0.81
Syn1-202ENSMUST00000115345 Ndufs7Q9DC70 224 aa10□□□□□ -0.81
Syn1-202ENSMUST00000115345 Cypt14J3QPF7 87 aa10□□□□□ -0.81
Syn1-202ENSMUST00000115345 Cmya5Q70KF4 3739 aa10□□□□□ -0.81
Syn1-202ENSMUST00000115345 Igkv8-18A0A0B4J1J3 123 aa9.99□□□□□ -0.81
Syn1-202ENSMUST00000115345 Smim29Q8R043 75 aa9.99□□□□□ -0.81
Syn1-202ENSMUST00000115345 Dpm3Q9D1Q4 92 aa9.99□□□□□ -0.81
Syn1-202ENSMUST00000115345 Gm36368A0A1D5RLK8 91 aa9.98□□□□□ -0.81
Syn1-202ENSMUST00000115345 A930009A15RikG3UYI6 118 aa9.98□□□□□ -0.81
Syn1-202ENSMUST00000115345 Cnep1r1Q3UJ81 125 aa9.98□□□□□ -0.81
Syn1-202ENSMUST00000115345 Pde6gP09174 87 aa9.97□□□□□ -0.81
Syn1-202ENSMUST00000115345 Ankrd17Q99NH0 2603 aaKnown RBP9.97□□□□□ -0.81
Syn1-202ENSMUST00000115345 Igkv4-78A0A0A6YYE5 119 aa9.97□□□□□ -0.81
Syn1-202ENSMUST00000115345 Med13lQ6JPI3 2207 aa9.97□□□□□ -0.81
Syn1-202ENSMUST00000115345 Igkv8-34A0A0G2JDU0 121 aa9.97□□□□□ -0.81
Syn1-202ENSMUST00000115345 Igkv6-15A0A140T8M5 115 aa9.97□□□□□ -0.81
Syn1-202ENSMUST00000115345 Mrps21P58059 87 aa9.96□□□□□ -0.81
Syn1-202ENSMUST00000115345 Col6a4A2AX52 2309 aa9.96□□□□□ -0.82
Syn1-202ENSMUST00000115345 Spag11Q8K4N2 71 aa9.95□□□□□ -0.82
Syn1-202ENSMUST00000115345 Tln2Q71LX4 2375 aa9.95□□□□□ -0.82
Syn1-202ENSMUST00000115345 Klk12B2RVZ0 247 aa9.95□□□□□ -0.82
Syn1-202ENSMUST00000115345 Klk9Q32M27 251 aa9.95□□□□□ -0.82
Syn1-202ENSMUST00000115345 Flg2Q2VIS4 2362 aa9.95□□□□□ -0.82
Syn1-202ENSMUST00000115345 Gm20538F6Z9R1 75 aa9.95□□□□□ -0.82
Syn1-202ENSMUST00000115345 LhbO09108 141 aa9.95□□□□□ -0.82
Syn1-202ENSMUST00000115345 Cd59aO55186 123 aa9.95□□□□□ -0.82
Syn1-202ENSMUST00000115345 Cdc42se2Q8BGH7 84 aa9.95□□□□□ -0.82
Syn1-202ENSMUST00000115345 A0A286YCN5 57 aa9.94□□□□□ -0.82
Syn1-202ENSMUST00000115345 Reg3aO09037 175 aa9.92□□□□□ -0.82
Syn1-202ENSMUST00000115345 P01738 130 aa9.92□□□□□ -0.82
Syn1-202ENSMUST00000115345 Ank2Q8C8R3 3898 aa9.92□□□□□ -0.82
Syn1-202ENSMUST00000115345 Usp9yF8VPU6 2556 aa9.92□□□□□ -0.82
Syn1-202ENSMUST00000115345 Igkv8-24A0A140T8P5 121 aa9.92□□□□□ -0.82
Syn1-202ENSMUST00000115345 Gm9513B3GLJ6 99 aa9.92□□□□□ -0.82
Syn1-202ENSMUST00000115345 Ighv3-1A0A075B5S6 116 aa9.92□□□□□ -0.82
Syn1-202ENSMUST00000115345 Igkv4-79A0A075B5L8 119 aa9.91□□□□□ -0.82
Syn1-202ENSMUST00000115345 Igkv4-57-1A0A075B5M4 119 aa9.9□□□□□ -0.82
Syn1-202ENSMUST00000115345 Gm16485Q8C4B7 115 aa9.9□□□□□ -0.82
Syn1-202ENSMUST00000115345 A730071L15RikQ8C4X0 137 aa9.9□□□□□ -0.82
Syn1-202ENSMUST00000115345 Igkv4-62A0A0G2JDW9 117 aa9.88□□□□□ -0.83
Syn1-202ENSMUST00000115345 CicQ924A2 2510 aa9.88□□□□□ -0.83
Syn1-202ENSMUST00000115345 Sfta2E9PXB6 77 aa9.88□□□□□ -0.83
Syn1-202ENSMUST00000115345 B9d2Q3UK10 175 aa9.88□□□□□ -0.83
Syn1-202ENSMUST00000115345 Gm10645Q3UPY1 145 aa9.88□□□□□ -0.83
Syn1-202ENSMUST00000115345 Armcx4E9PWM3 2356 aa9.88□□□□□ -0.83
Syn1-202ENSMUST00000115345 Obox2E9PXV9 151 aa9.88□□□□□ -0.83
Syn1-202ENSMUST00000115345 9530003J23RikQ8BM26 151 aa9.87□□□□□ -0.83
Syn1-202ENSMUST00000115345 Igkv8-19A0A0G2JFN8 121 aa9.87□□□□□ -0.83
Syn1-202ENSMUST00000115345 Gm10320E9PW43 113 aa9.87□□□□□ -0.83
Syn1-202ENSMUST00000115345 Znf706Q9D115 76 aaKnown RBP9.87□□□□□ -0.83
Syn1-202ENSMUST00000115345 Setd2E9Q5F9 2537 aa9.86□□□□□ -0.83
Syn1-202ENSMUST00000115345 Tff3Q62395 81 aa9.86□□□□□ -0.83
Syn1-202ENSMUST00000115345 MtorQ9JLN9 2549 aa9.85□□□□□ -0.83
Syn1-202ENSMUST00000115345 Cypt15B1AXS0 87 aa9.85□□□□□ -0.83
Syn1-202ENSMUST00000115345 FshbQ60687 130 aa9.85□□□□□ -0.83
Syn1-202ENSMUST00000115345 FlnaQ8BTM8 2647 aaKnown RBP9.85□□□□□ -0.83
Syn1-202ENSMUST00000115345 Defb50Q6TU36 73 aa9.85□□□□□ -0.83
Syn1-202ENSMUST00000115345 Minos1Q7TNS2 76 aa9.84□□□□□ -0.83
Syn1-202ENSMUST00000115345 Cox7b2Q9D2H1 82 aa9.84□□□□□ -0.83
Syn1-202ENSMUST00000115345 Igkv4-58A0A0G2JGI6 119 aa9.83□□□□□ -0.84
Syn1-202ENSMUST00000115345 OtogO55225 2910 aa9.83□□□□□ -0.84
Syn1-202ENSMUST00000115345 Tfpi2O35536 230 aa9.82□□□□□ -0.84
Syn1-202ENSMUST00000115345 Gm17727E9Q4V7 109 aa9.81□□□□□ -0.84
Syn1-202ENSMUST00000115345 Reg3gO09049 174 aa9.81□□□□□ -0.84
Syn1-202ENSMUST00000115345 Prp2P05143 317 aa9.81□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 58.1 ms