RNA–Protein interactions for RNA: ENSMUST00000045312.5

Smc1a-201, Transcript of Structural maintenance of chromosomes protein 1A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc1a, Length 4,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1a-201ENSMUST00000045312 TrrapQ80YV3 2565 aaKnown RBP5.02□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Bahcc1Q3UHR0 2643 aa5.02□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Usp9yF8VPU6 2556 aa5.02□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Gm11213A0A1B0GR83 88 aa5.02□□□□□ -1.61
Smc1a-201ENSMUST00000045312 PlaurP35456 327 aa5.02□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Odf3l2Q3TZ65 277 aa5.02□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Q9DAA7 145 aa5.02□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Igkv3-3A0A140T8Q0 119 aa5.01□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Obox2E9PXV9 151 aa5.01□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Zfand2aQ9JII7 171 aa5.01□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Pla2g1bQ9Z0Y2 146 aa5.01□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Eif4ebp3Q80VV3 101 aa5.01□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Gm42715A0A087WP63 3095 aaKnown RBP5.01□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Chchd7Q8K2Q5 85 aa5□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Gpha2Q925Q5 128 aa5□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Igkv8-27A0A0G2JF28 120 aa5□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Igkv8-30A0A140T8M3 121 aa5□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Defb37Q7TMD2 62 aa5□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Gm9922Q8C3P1 144 aa5□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Igkv3-4A0A140T8Q4 119 aa4.99□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Myo18bE9PV66 2605 aa4.99□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Ighv2-5A0A0A6YY69 116 aa4.99□□□□□ -1.61
Smc1a-201ENSMUST00000045312 E130114P18RikF6S0S7 154 aa4.99□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Defb42Q8BVB5 75 aa4.99□□□□□ -1.61
Smc1a-201ENSMUST00000045312 1700012A03RikQ9DAF1 130 aa4.98□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Tcl1b5P56845 121 aa4.97□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Gm17689B3GLJ4 109 aa4.97□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Defb2P82020 71 aa4.97□□□□□ -1.61
Smc1a-201ENSMUST00000045312 AI606181Q8C7B9 129 aa4.97□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Ighv2-9-1A0A075B697 116 aa4.97□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Igkv8-21A0A140T8P7 120 aa4.97□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Reg3aO09037 175 aa4.96□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Cdc42se1Q8BHL7 80 aa4.96□□□□□ -1.61
Smc1a-201ENSMUST00000045312 Gm10308Q9CVR5 141 aa4.96□□□□□ -1.62
Smc1a-201ENSMUST00000045312 CrygfQ9CXV3 174 aa4.96□□□□□ -1.62
Smc1a-201ENSMUST00000045312 A930009A15RikG3UYI6 118 aa4.95□□□□□ -1.62
Smc1a-201ENSMUST00000045312 Ly6c2P0CW03 131 aa4.95□□□□□ -1.62
Smc1a-201ENSMUST00000045312 Gm9903Q8C9Y8 129 aa4.95□□□□□ -1.62
Smc1a-201ENSMUST00000045312 Gm5617Q91VN2 117 aa4.95□□□□□ -1.62
Smc1a-201ENSMUST00000045312 Msrb1Q9JLC3 116 aa4.95□□□□□ -1.62
Smc1a-201ENSMUST00000045312 FshbQ60687 130 aa4.95□□□□□ -1.62
Smc1a-201ENSMUST00000045312 Ighv2-2A0A075B5P8 116 aa4.94□□□□□ -1.62
Smc1a-201ENSMUST00000045312 P01821 116 aa4.94□□□□□ -1.62
Smc1a-201ENSMUST00000045312 Mrpl34Q99N91 92 aa4.94□□□□□ -1.62
Smc1a-201ENSMUST00000045312 Epg5Q80TA9 2572 aa4.93□□□□□ -1.62
Smc1a-201ENSMUST00000045312 Gm10160F6Y577 67 aa4.93□□□□□ -1.62
Smc1a-201ENSMUST00000045312 Gm4707V9GXN5 68 aa4.93□□□□□ -1.62
Smc1a-201ENSMUST00000045312 Gm3443F7CCV5 94 aa4.92□□□□□ -1.62
Smc1a-201ENSMUST00000045312 Igkv3-12A0A140T8P0 119 aa4.92□□□□□ -1.62
Smc1a-201ENSMUST00000045312 Prr9Q8BV84 116 aa4.92□□□□□ -1.62
Smc1a-201ENSMUST00000045312 Gm9767G3X930 207 aa4.92□□□□□ -1.62
Smc1a-201ENSMUST00000045312 Cox6a2P43023 97 aa4.92□□□□□ -1.62
Smc1a-201ENSMUST00000045312 C130032M10RikQ8C888 123 aa4.92□□□□□ -1.62
Smc1a-201ENSMUST00000045312 Cep192E9Q4Y4 2514 aaKnown RBP4.92□□□□□ -1.62
Smc1a-201ENSMUST00000045312 Prrc2cQ3TLH4 2846 aaKnown RBP4.91□□□□□ -1.62
Smc1a-201ENSMUST00000045312 Cep350E9Q309 3095 aa4.91□□□□□ -1.62
Smc1a-201ENSMUST00000045312 Coa5Q99M07 74 aa4.91□□□□□ -1.62
Smc1a-201ENSMUST00000045312 Abca12E9Q876 2595 aa4.9□□□□□ -1.62
Smc1a-201ENSMUST00000045312 Gm44790A0A0N4SV91 103 aa4.9□□□□□ -1.62
Smc1a-201ENSMUST00000045312 Gm21886J3QJU9 214 aa4.9□□□□□ -1.62
Smc1a-201ENSMUST00000045312 CrygaP04345 174 aa4.9□□□□□ -1.63
Smc1a-201ENSMUST00000045312 TrioQ0KL02 3102 aa4.89□□□□□ -1.63
Smc1a-201ENSMUST00000045312 Gm17509Q9CZ61 145 aa4.89□□□□□ -1.63
Smc1a-201ENSMUST00000045312 MobpQ9D2P8 170 aa4.89□□□□□ -1.63
Smc1a-201ENSMUST00000045312 Gm28230A0A0A0MQ91 144 aa4.89□□□□□ -1.63
Smc1a-201ENSMUST00000045312 Fam229bQ8CF36 80 aa4.89□□□□□ -1.63
Smc1a-201ENSMUST00000045312 HrnrQ8VHD8 2496 aa4.89□□□□□ -1.63
Smc1a-201ENSMUST00000045312 Gm10770F7D043 238 aa4.89□□□□□ -1.63
Smc1a-201ENSMUST00000045312 1810062G17RikG3X8Y2 129 aa4.88□□□□□ -1.63
Smc1a-201ENSMUST00000045312 Dnah12Q3V0Q1 3086 aa4.88□□□□□ -1.63
Smc1a-201ENSMUST00000045312 Wfdc15aQ8BH89 80 aa4.88□□□□□ -1.63
Smc1a-201ENSMUST00000045312 SycnQ8VCK7 134 aa4.88□□□□□ -1.63
Smc1a-201ENSMUST00000045312 CenpfE9Q3P4 2997 aaKnown RBP4.88□□□□□ -1.63
Smc1a-201ENSMUST00000045312 Ighv2-9A0A075B5Q5 116 aa4.88□□□□□ -1.63
Smc1a-201ENSMUST00000045312 1700018G05RikA0A1B0GSI2 66 aa4.88□□□□□ -1.63
Smc1a-201ENSMUST00000045312 Lama2Q60675 3118 aaKnown RBP4.87□□□□□ -1.63
Smc1a-201ENSMUST00000045312 Phxr4P15974 95 aa4.87□□□□□ -1.63
Smc1a-201ENSMUST00000045312 Zfp292Q9Z2U2 2698 aa4.87□□□□□ -1.63
Smc1a-201ENSMUST00000045312 Igkv8-19A0A0G2JFN8 121 aa4.87□□□□□ -1.63
Smc1a-201ENSMUST00000045312 Gm20661K7N787 53 aa4.87□□□□□ -1.63
Smc1a-201ENSMUST00000045312 Wfdc3Q14AE4 130 aa4.87□□□□□ -1.63
Smc1a-201ENSMUST00000045312 CnbpP53996 178 aaKnown RBP4.86□□□□□ -1.63
Smc1a-201ENSMUST00000045312 Srsf12Q8C8K3 266 aa4.86□□□□□ -1.63
Smc1a-201ENSMUST00000045312 Limd2Q8BGB5 128 aa4.85□□□□□ -1.63
Smc1a-201ENSMUST00000045312 UtrnE9Q6R7 3430 aa4.85□□□□□ -1.63
Smc1a-201ENSMUST00000045312 Unc79Q0KK59 2596 aa4.85□□□□□ -1.63
Smc1a-201ENSMUST00000045312 Jbts17Q8CE72 3214 aa4.84□□□□□ -1.63
Smc1a-201ENSMUST00000045312 D730001G18RikA0A087WQU7 115 aa4.84□□□□□ -1.63
Smc1a-201ENSMUST00000045312 PscaP57096 123 aa4.84□□□□□ -1.63
Smc1a-201ENSMUST00000045312 Elof1P60003 83 aa4.84□□□□□ -1.63
Smc1a-201ENSMUST00000045312 A730009L09RikA0A1B0GS82 72 aa4.84□□□□□ -1.64
Smc1a-201ENSMUST00000045312 Gm10643Q3URG9 111 aa4.84□□□□□ -1.64
Smc1a-201ENSMUST00000045312 Tnrc18Q80WC3 2878 aa4.83□□□□□ -1.64
Smc1a-201ENSMUST00000045312 Igkv8-28A0A0G2JE47 121 aa4.83□□□□□ -1.64
Smc1a-201ENSMUST00000045312 Bri3P28662 125 aa4.82□□□□□ -1.64
Smc1a-201ENSMUST00000045312 Q8K1L6 76 aa4.82□□□□□ -1.64
Smc1a-201ENSMUST00000045312 Ankrd17Q99NH0 2603 aaKnown RBP4.82□□□□□ -1.64
Smc1a-201ENSMUST00000045312 Wfdc17Q5SSJ1 76 aa4.82□□□□□ -1.64
Smc1a-201ENSMUST00000045312 Rpl37aP61514 92 aa4.82□□□□□ -1.64
Smc1a-201ENSMUST00000045312 Igkv3-7A0A0G2JE31 119 aa4.82□□□□□ -1.64
Retrieved 100 of 22,080 RNA–protein pairs in 106.6 ms