RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 Fgfbp3Q1HCM0 245 aa6.34□□□□□ -1.4
Ttc28-201ENSMUST00000040111 Gm4707V9GXN5 68 aa6.34□□□□□ -1.4
Ttc28-201ENSMUST00000040111 CrygeQ03740 174 aa6.33□□□□□ -1.4
Ttc28-201ENSMUST00000040111 Ighv1-66A0A075B5X5 117 aa6.33□□□□□ -1.4
Ttc28-201ENSMUST00000040111 Ube2d1P61080 147 aaKnown RBP6.33□□□□□ -1.4
Ttc28-201ENSMUST00000040111 Rtl10D3YWW5 146 aa6.32□□□□□ -1.4
Ttc28-201ENSMUST00000040111 Sprr2jO70561 109 aa6.32□□□□□ -1.4
Ttc28-201ENSMUST00000040111 UtrnE9Q6R7 3430 aa6.32□□□□□ -1.4
Ttc28-201ENSMUST00000040111 Ighv3-3A0A0A6YWL2 116 aa6.32□□□□□ -1.4
Ttc28-201ENSMUST00000040111 TeppQ6IMH0 216 aa6.32□□□□□ -1.4
Ttc28-201ENSMUST00000040111 Ovol3D3YYM0 189 aa6.32□□□□□ -1.4
Ttc28-201ENSMUST00000040111 SycnQ8VCK7 134 aa6.32□□□□□ -1.4
Ttc28-201ENSMUST00000040111 P06329 120 aa6.32□□□□□ -1.4
Ttc28-201ENSMUST00000040111 Gm7138L7N2C3 230 aa6.31□□□□□ -1.4
Ttc28-201ENSMUST00000040111 Gm3238W4VSP7 230 aa6.31□□□□□ -1.4
Ttc28-201ENSMUST00000040111 Gm3443F7CCV5 94 aa6.31□□□□□ -1.4
Ttc28-201ENSMUST00000040111 FlnaQ8BTM8 2647 aaKnown RBP6.31□□□□□ -1.4
Ttc28-201ENSMUST00000040111 4930524J08RikQ9CUJ5 163 aa6.3□□□□□ -1.4
Ttc28-201ENSMUST00000040111 Ifitm6A0A1B0GS75 124 aa6.3□□□□□ -1.4
Ttc28-201ENSMUST00000040111 A930009A15RikG3UYI6 118 aa6.3□□□□□ -1.4
Ttc28-201ENSMUST00000040111 4930432M17RikQ3V0W9 174 aa6.3□□□□□ -1.4
Ttc28-201ENSMUST00000040111 Defb42Q8BVB5 75 aa6.3□□□□□ -1.4
Ttc28-201ENSMUST00000040111 Col27a1Q5QNQ9 1845 aa6.29□□□□□ -1.4
Ttc28-201ENSMUST00000040111 Cep350E9Q309 3095 aa6.29□□□□□ -1.4
Ttc28-201ENSMUST00000040111 Srsf12Q8C8K3 266 aa6.29□□□□□ -1.4
Ttc28-201ENSMUST00000040111 Rpl28P41105 137 aaKnown RBP6.29□□□□□ -1.4
Ttc28-201ENSMUST00000040111 Prr9Q8BV84 116 aa6.28□□□□□ -1.4
Ttc28-201ENSMUST00000040111 Map1aQ9QYR6 2776 aa6.28□□□□□ -1.4
Ttc28-201ENSMUST00000040111 4930518I15RikQ3V2W7 57 aa6.28□□□□□ -1.4
Ttc28-201ENSMUST00000040111 Crip2Q9DCT8 208 aaKnown RBP6.28□□□□□ -1.4
Ttc28-201ENSMUST00000040111 Chchd7Q8K2Q5 85 aa6.27□□□□□ -1.41
Ttc28-201ENSMUST00000040111 SnurfQ9WU12 71 aa6.27□□□□□ -1.41
Ttc28-201ENSMUST00000040111 C130032M10RikQ8C888 123 aa6.27□□□□□ -1.41
Ttc28-201ENSMUST00000040111 Gm10135F6TEE5 83 aa6.27□□□□□ -1.41
Ttc28-201ENSMUST00000040111 Cd164Q9R0L9 197 aa6.26□□□□□ -1.41
Ttc28-201ENSMUST00000040111 1700056E22RikF7CNM6 234 aa6.25□□□□□ -1.41
Ttc28-201ENSMUST00000040111 Gm5153P01627 120 aa6.25□□□□□ -1.41
Ttc28-201ENSMUST00000040111 Col4a2P08122 1707 aa6.25□□□□□ -1.41
Ttc28-201ENSMUST00000040111 Adm2Q7TNK8 150 aa6.25□□□□□ -1.41
Ttc28-201ENSMUST00000040111 Gm10570F6VB42 170 aa6.25□□□□□ -1.41
Ttc28-201ENSMUST00000040111 Cdip1Q9DB75 208 aa6.25□□□□□ -1.41
Ttc28-201ENSMUST00000040111 Bean1Q9EQG5 255 aa6.25□□□□□ -1.41
Ttc28-201ENSMUST00000040111 9530053A07RikE9PVG8 2581 aa6.25□□□□□ -1.41
Ttc28-201ENSMUST00000040111 Polr2kQ63871 58 aa6.25□□□□□ -1.41
Ttc28-201ENSMUST00000040111 Defb39Q70KL3 74 aa6.24□□□□□ -1.41
Ttc28-201ENSMUST00000040111 Ighv2-9-1A0A075B697 116 aa6.24□□□□□ -1.41
Ttc28-201ENSMUST00000040111 Gm10509O88255 85 aa6.24□□□□□ -1.41
Ttc28-201ENSMUST00000040111 Gm17606F6ZL36 78 aa6.23□□□□□ -1.41
Ttc28-201ENSMUST00000040111 4930519P11RikQ9CUJ8 166 aa6.23□□□□□ -1.41
Ttc28-201ENSMUST00000040111 Gm12216A0A1W2P827 62 aa6.23□□□□□ -1.41
Ttc28-201ENSMUST00000040111 Defb37Q7TMD2 62 aa6.23□□□□□ -1.41
Ttc28-201ENSMUST00000040111 Gm5142Q8C5X9 133 aa6.23□□□□□ -1.41
Ttc28-201ENSMUST00000040111 Igkv8-19A0A0G2JFN8 121 aa6.23□□□□□ -1.41
Ttc28-201ENSMUST00000040111 Wfdc17Q5SSJ1 76 aa6.22□□□□□ -1.41
Ttc28-201ENSMUST00000040111 Gm9922Q8C3P1 144 aa6.22□□□□□ -1.41
Ttc28-201ENSMUST00000040111 4930556J24RikQ9D4U7 146 aa6.22□□□□□ -1.41
Ttc28-201ENSMUST00000040111 CnfnQ6PCW6 111 aa6.22□□□□□ -1.41
Ttc28-201ENSMUST00000040111 Jbts17Q8CE72 3214 aa6.22□□□□□ -1.41
Ttc28-201ENSMUST00000040111 Shisa2Q8QZV2 295 aa6.22□□□□□ -1.41
Ttc28-201ENSMUST00000040111 Nsd1O88491 2588 aaKnown RBP6.21□□□□□ -1.42
Ttc28-201ENSMUST00000040111 Gm16485Q8C4B7 115 aa6.21□□□□□ -1.42
Ttc28-201ENSMUST00000040111 Coa6Q8BGD8 79 aa6.2□□□□□ -1.42
Ttc28-201ENSMUST00000040111 RetnlbQ99P86 105 aa6.2□□□□□ -1.42
Ttc28-201ENSMUST00000040111 Cdc42se2Q8BGH7 84 aa6.19□□□□□ -1.42
Ttc28-201ENSMUST00000040111 Tep1P97499 2629 aa6.19□□□□□ -1.42
Ttc28-201ENSMUST00000040111 Gm28230A0A0A0MQ91 144 aa6.19□□□□□ -1.42
Ttc28-201ENSMUST00000040111 Znf580Q9DB38 172 aa6.19□□□□□ -1.42
Ttc28-201ENSMUST00000040111 Ighv1-56A0A0A6YXG2 117 aa6.19□□□□□ -1.42
Ttc28-201ENSMUST00000040111 Spint4Q9D263 159 aa6.19□□□□□ -1.42
Ttc28-201ENSMUST00000040111 Gm28374F6SG70 93 aa6.18□□□□□ -1.42
Ttc28-201ENSMUST00000040111 Gm10845Q3UNY9 185 aa6.18□□□□□ -1.42
Ttc28-201ENSMUST00000040111 Lelp1Q9DAE3 120 aa6.18□□□□□ -1.42
Ttc28-201ENSMUST00000040111 Sostdc1Q9CQN4 206 aa6.17□□□□□ -1.42
Ttc28-201ENSMUST00000040111 Chd6A3KFM7 2711 aa6.17□□□□□ -1.42
Ttc28-201ENSMUST00000040111 6430550D23RikE9Q1X6 194 aa6.17□□□□□ -1.42
Ttc28-201ENSMUST00000040111 Ighv2-9A0A075B5Q5 116 aa6.16□□□□□ -1.42
Ttc28-201ENSMUST00000040111 Gm9573F7C950 1606 aa6.16□□□□□ -1.42
Ttc28-201ENSMUST00000040111 Reg3aO09037 175 aa6.16□□□□□ -1.42
Ttc28-201ENSMUST00000040111 Krtap24-1G3X9A2 248 aa6.16□□□□□ -1.42
Ttc28-201ENSMUST00000040111 BC025920Q3US60 128 aa6.16□□□□□ -1.42
Ttc28-201ENSMUST00000040111 Gm10642Q3TWM1 71 aa6.16□□□□□ -1.42
Ttc28-201ENSMUST00000040111 Krtap27-1E9PX37 202 aa6.16□□□□□ -1.42
Ttc28-201ENSMUST00000040111 Gm10549Q3URY4 149 aa6.15□□□□□ -1.42
Ttc28-201ENSMUST00000040111 Ntn5Q3UQ22 452 aa6.14□□□□□ -1.43
Ttc28-201ENSMUST00000040111 Gm10197F6QEY5 67 aa6.14□□□□□ -1.43
Ttc28-201ENSMUST00000040111 Crip3Q6Q6R3 243 aa6.14□□□□□ -1.43
Ttc28-201ENSMUST00000040111 Smr3aQ61900 147 aa6.14□□□□□ -1.43
Ttc28-201ENSMUST00000040111 Gm17509Q9CZ61 145 aa6.14□□□□□ -1.43
Ttc28-201ENSMUST00000040111 A730009L09RikA0A1B0GS82 72 aa6.12□□□□□ -1.43
Ttc28-201ENSMUST00000040111 Zfand2aQ9JII7 171 aa6.12□□□□□ -1.43
Ttc28-201ENSMUST00000040111 A530084C06RikQ3UTW2 186 aa6.12□□□□□ -1.43
Ttc28-201ENSMUST00000040111 1700018G05RikA0A1B0GSI2 66 aa6.12□□□□□ -1.43
Ttc28-201ENSMUST00000040111 Mp68P56379 58 aa6.12□□□□□ -1.43
Ttc28-201ENSMUST00000040111 TrioQ0KL02 3102 aa6.12□□□□□ -1.43
Ttc28-201ENSMUST00000040111 Prr13Q9CQJ5 137 aa6.12□□□□□ -1.43
Ttc28-201ENSMUST00000040111 Fam19a3Q7TPG6 132 aa6.12□□□□□ -1.43
Ttc28-201ENSMUST00000040111 Gm10160F6Y577 67 aa6.11□□□□□ -1.43
Ttc28-201ENSMUST00000040111 Limd2Q8BGB5 128 aa6.11□□□□□ -1.43
Ttc28-201ENSMUST00000040111 Mrpl34Q99N91 92 aa6.11□□□□□ -1.43
Ttc28-201ENSMUST00000040111 Col6a5A6H584 2640 aa6.11□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 129.7 ms