RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Rbmy1a1O35698 380 aa6□□□□□ -1.45
Trim39-201ENSMUST00000042717 Ly6gP35461 111 aa6□□□□□ -1.45
Trim39-201ENSMUST00000042717 Tal2Q62282 108 aa6□□□□□ -1.45
Trim39-201ENSMUST00000042717 Plac1Q9JI83 173 aa6□□□□□ -1.45
Trim39-201ENSMUST00000042717 Trav13d-4A0A0G2JFX3 110 aa5.99□□□□□ -1.45
Trim39-201ENSMUST00000042717 Gm44965A0A0N4SVR3 59 aa5.99□□□□□ -1.45
Trim39-201ENSMUST00000042717 NpwA0A1L1STR8 176 aa5.99□□□□□ -1.45
Trim39-201ENSMUST00000042717 Defa2P28309 93 aa5.99□□□□□ -1.45
Trim39-201ENSMUST00000042717 Zc2hc1bQ9D534 172 aa5.99□□□□□ -1.45
Trim39-201ENSMUST00000042717 Gm26920S4R2A5 56 aa5.99□□□□□ -1.45
Trim39-201ENSMUST00000042717 Megf8P60882 2789 aa5.99□□□□□ -1.45
Trim39-201ENSMUST00000042717 Ighv8-13A0A075B5Y0 101 aa5.99□□□□□ -1.45
Trim39-201ENSMUST00000042717 Gm43218A0A0G2JGT0 114 aa5.99□□□□□ -1.45
Trim39-201ENSMUST00000042717 Gm45717A0A1B0GT68 152 aa5.99□□□□□ -1.45
Trim39-201ENSMUST00000042717 Fgf6P21658 208 aa5.99□□□□□ -1.45
Trim39-201ENSMUST00000042717 Bles03Q8VD62 251 aa5.99□□□□□ -1.45
Trim39-201ENSMUST00000042717 Prr13Q9CQJ5 137 aa5.99□□□□□ -1.45
Trim39-201ENSMUST00000042717 Erg28Q9ERY9 140 aa5.99□□□□□ -1.45
Trim39-201ENSMUST00000042717 Igkv3-1A0A075B5P1 119 aa5.98□□□□□ -1.45
Trim39-201ENSMUST00000042717 Gm16181B0V2H2 73 aa5.98□□□□□ -1.45
Trim39-201ENSMUST00000042717 Reg3bP35230 175 aa5.98□□□□□ -1.45
Trim39-201ENSMUST00000042717 Trav7-6A0A075B640 112 aa5.98□□□□□ -1.45
Trim39-201ENSMUST00000042717 Tmem213Q08EA8 116 aa5.98□□□□□ -1.45
Trim39-201ENSMUST00000042717 SrarpQ3ULG3 163 aa5.98□□□□□ -1.45
Trim39-201ENSMUST00000042717 Anapc13Q8R034 74 aa5.98□□□□□ -1.45
Trim39-201ENSMUST00000042717 4930544G11RikQ9CR99 193 aa5.98□□□□□ -1.45
Trim39-201ENSMUST00000042717 Stab2Q8R4U0 2559 aa5.98□□□□□ -1.45
Trim39-201ENSMUST00000042717 Gm10647E9Q8X0 124 aa5.97□□□□□ -1.45
Trim39-201ENSMUST00000042717 Gm11444F6QMA6 170 aa5.97□□□□□ -1.45
Trim39-201ENSMUST00000042717 Tfpi2O35536 230 aa5.97□□□□□ -1.45
Trim39-201ENSMUST00000042717 Odf3l2Q3TZ65 277 aa5.97□□□□□ -1.45
Trim39-201ENSMUST00000042717 Hbb-bsA8DUK4 147 aa5.97□□□□□ -1.45
Trim39-201ENSMUST00000042717 Hbb-b1P02088 147 aa5.97□□□□□ -1.45
Trim39-201ENSMUST00000042717 Bsph2Q0Q236 131 aa5.97□□□□□ -1.45
Trim39-201ENSMUST00000042717 Snhg11Q4G0K9 87 aa5.97□□□□□ -1.45
Trim39-201ENSMUST00000042717 Rbmy1bQ60990 380 aa5.97□□□□□ -1.45
Trim39-201ENSMUST00000042717 Defb11Q8R2I7 77 aa5.97□□□□□ -1.45
Trim39-201ENSMUST00000042717 MobpQ9D2P8 170 aa5.97□□□□□ -1.45
Trim39-201ENSMUST00000042717 AplnQ9R0R4 77 aa5.97□□□□□ -1.45
Trim39-201ENSMUST00000042717 Ighv13-2A0A0A6YWN3 119 aa5.96□□□□□ -1.45
Trim39-201ENSMUST00000042717 Insl3O09107 122 aa5.96□□□□□ -1.45
Trim39-201ENSMUST00000042717 Hint1P70349 126 aaKnown RBP5.96□□□□□ -1.45
Trim39-201ENSMUST00000042717 Rmi2Q3UPE3 149 aa5.96□□□□□ -1.45
Trim39-201ENSMUST00000042717 Igkv6-13A0A0G2JGY3 119 aa5.95□□□□□ -1.46
Trim39-201ENSMUST00000042717 4930546C10RikE9Q4Y3 121 aa5.95□□□□□ -1.46
Trim39-201ENSMUST00000042717 Lect2O88803 151 aa5.95□□□□□ -1.46
Trim39-201ENSMUST00000042717 Cdip1Q9DB75 208 aa5.95□□□□□ -1.46
Trim39-201ENSMUST00000042717 MalO09198 153 aa5.95□□□□□ -1.46
Trim39-201ENSMUST00000042717 Ccl25O35903 144 aa5.95□□□□□ -1.46
Trim39-201ENSMUST00000042717 P01823 113 aa5.95□□□□□ -1.46
Trim39-201ENSMUST00000042717 Fgf23Q9EPC2 251 aa5.95□□□□□ -1.46
Trim39-201ENSMUST00000042717 5730596B20RikQ8BQ08 205 aa5.95□□□□□ -1.46
Trim39-201ENSMUST00000042717 Prss58Q8BW11 241 aa5.94□□□□□ -1.46
Trim39-201ENSMUST00000042717 BaalcQ8VHV1 145 aa5.94□□□□□ -1.46
Trim39-201ENSMUST00000042717 Tenm2Q9WTS5 2764 aa5.94□□□□□ -1.46
Trim39-201ENSMUST00000042717 Srsf9Q9D0B0 222 aaKnown RBP5.94□□□□□ -1.46
Trim39-201ENSMUST00000042717 Triap1Q9D8Z2 76 aa5.94□□□□□ -1.46
Trim39-201ENSMUST00000042717 Trav9n-4A0A075B631 113 aa5.93□□□□□ -1.46
Trim39-201ENSMUST00000042717 Gm28269A0A087WSG3 125 aa5.93□□□□□ -1.46
Trim39-201ENSMUST00000042717 Trav11A0A0B4J1J9 114 aa5.93□□□□□ -1.46
Trim39-201ENSMUST00000042717 Vamp8O70404 101 aa5.93□□□□□ -1.46
Trim39-201ENSMUST00000042717 SmcpP15265 143 aa5.93□□□□□ -1.46
Trim39-201ENSMUST00000042717 2010109I03RikQ9CQ11 111 aa5.93□□□□□ -1.46
Trim39-201ENSMUST00000042717 Ighv1-62-1A0A075B5U3 116 aa5.93□□□□□ -1.46
Trim39-201ENSMUST00000042717 Zfp951A0A087WRH0 451 aa5.93□□□□□ -1.46
Trim39-201ENSMUST00000042717 Gm4861Q8C5A4 106 aa5.93□□□□□ -1.46
Trim39-201ENSMUST00000042717 Gm11020F6ZGD5 61 aa5.92□□□□□ -1.46
Trim39-201ENSMUST00000042717 P01843 105 aa5.92□□□□□ -1.46
Trim39-201ENSMUST00000042717 Dnah3Q8BW94 4083 aa5.92□□□□□ -1.46
Trim39-201ENSMUST00000042717 Gm6812B1AXU1 112 aa5.92□□□□□ -1.46
Trim39-201ENSMUST00000042717 PemtQ61907 199 aa5.92□□□□□ -1.46
Trim39-201ENSMUST00000042717 C920008G01RikA0A0B4J1N1 112 aa5.91□□□□□ -1.46
Trim39-201ENSMUST00000042717 Krtap11-1E9Q2E9 183 aa5.91□□□□□ -1.46
Trim39-201ENSMUST00000042717 Smim1P0C8K7 78 aa5.91□□□□□ -1.46
Trim39-201ENSMUST00000042717 Defa15P50713 93 aa5.91□□□□□ -1.46
Trim39-201ENSMUST00000042717 Prelid3aQ8VE85 172 aa5.91□□□□□ -1.46
Trim39-201ENSMUST00000042717 Ss18l2Q9D174 77 aa5.91□□□□□ -1.46
Trim39-201ENSMUST00000042717 Dpm2Q9Z324 84 aa5.91□□□□□ -1.46
Trim39-201ENSMUST00000042717 Gm10295Q8CCF3 114 aa5.91□□□□□ -1.46
Trim39-201ENSMUST00000042717 Csmd3Q80T79 3707 aa5.91□□□□□ -1.46
Trim39-201ENSMUST00000042717 CirbpP60824 172 aaKnown RBP5.9□□□□□ -1.46
Trim39-201ENSMUST00000042717 E130208F15RikQ3UPV3 143 aa5.9□□□□□ -1.46
Trim39-201ENSMUST00000042717 EnhoQ8K1D8 76 aa5.9□□□□□ -1.46
Trim39-201ENSMUST00000042717 Tmem223Q9CQE2 199 aaKnown RBP5.9□□□□□ -1.46
Trim39-201ENSMUST00000042717 Trav9d-4A0A0G2JG37 103 aa5.9□□□□□ -1.46
Trim39-201ENSMUST00000042717 B230359F08RikA0A0B4J1K3 109 aa5.9□□□□□ -1.47
Trim39-201ENSMUST00000042717 CckP09240 115 aa5.9□□□□□ -1.47
Trim39-201ENSMUST00000042717 Dnah7bL7N1Y0 4068 aa5.89□□□□□ -1.47
Trim39-201ENSMUST00000042717 Spink13Q3UTS8 97 aa5.89□□□□□ -1.47
Trim39-201ENSMUST00000042717 Gm9507D3Z5T3 223 aa5.89□□□□□ -1.47
Trim39-201ENSMUST00000042717 Ntn5Q3UQ22 452 aa5.89□□□□□ -1.47
Trim39-201ENSMUST00000042717 Trav4n-4A0A075B615 110 aa5.88□□□□□ -1.47
Trim39-201ENSMUST00000042717 P01755 137 aa5.88□□□□□ -1.47
Trim39-201ENSMUST00000042717 9230102O04RikA2ASX7 82 aa5.88□□□□□ -1.47
Trim39-201ENSMUST00000042717 Gatd1Q8BFQ8 220 aa5.88□□□□□ -1.47
Trim39-201ENSMUST00000042717 9430069I07RikQ9CX21 111 aa5.88□□□□□ -1.47
Trim39-201ENSMUST00000042717 4930432M17RikQ3V0W9 174 aa5.88□□□□□ -1.47
Trim39-201ENSMUST00000042717 SpinklQ8CEK3 90 aa5.88□□□□□ -1.47
Trim39-201ENSMUST00000042717 Huwe1Q7TMY8 4377 aaKnown RBP5.87□□□□□ -1.47
Trim39-201ENSMUST00000042717 Igkv8-24A0A140T8P5 121 aa5.87□□□□□ -1.47
Retrieved 100 of 22,080 RNA–protein pairs in 66.6 ms