RNA–Protein interactions for RNA: ENSMUST00000041010.14

Ccdc9-201, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-201ENSMUST00000041010 Igkv1-117A0A140T8M0 119 aa15.41■□□□□ 0.06
Ccdc9-201ENSMUST00000041010 Tfpi2O35536 230 aa15.41■□□□□ 0.06
Ccdc9-201ENSMUST00000041010 Rnase1P00683 149 aa15.41■□□□□ 0.06
Ccdc9-201ENSMUST00000041010 Ndufa12Q7TMF3 145 aaKnown RBP15.4■□□□□ 0.06
Ccdc9-201ENSMUST00000041010 9430015G10RikA2ASP7 199 aa15.4■□□□□ 0.06
Ccdc9-201ENSMUST00000041010 H2al1aQ5M8Q2 105 aa15.4■□□□□ 0.06
Ccdc9-201ENSMUST00000041010 Gm10647E9Q8X0 124 aa15.39■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 Defb29Q8BGW9 78 aa15.39■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 Ucn2Q99ML8 113 aa15.39■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 A930009A15RikG3UYI6 118 aa15.38■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 Ighv2-9-1A0A075B697 116 aa15.38■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 Ighv1-56A0A0A6YXG2 117 aa15.38■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 Trav9n-2A0A0G2JDP3 113 aa15.38■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 Tenm3Q9WTS6 2715 aa15.37■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 Gm815Q3UWS2 115 aa15.37■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 4930544G11RikQ9CR99 193 aa15.37■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 Naa38Q9D2U5 125 aa15.37■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 Nf1Q04690 2841 aa15.37■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 Rif1Q6PR54 2419 aaKnown RBP15.37■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 Tmem254aP0DN89 123 aa15.36■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 Tmem254bP0DN90 123 aa15.36■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 Tmem254cP0DN91 123 aa15.36■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 Cdc42se2Q8BGH7 84 aa15.36■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 1810062G17RikG3X8Y2 129 aa15.36■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 Muc4Q8JZM8 3443 aa15.36■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 GfyJ3KML8 504 aa15.35■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 Fam19a5Q91WE9 132 aa15.35■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 Fhl2O70433 279 aa15.35■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 P01738 130 aa15.35■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 Cep192E9Q4Y4 2514 aaKnown RBP15.35■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 Epg5Q80TA9 2572 aa15.35■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 Cd99Q8VCN6 175 aa15.34■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 P01729 129 aa15.34■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 Plac8l1Q08EJ0 177 aa15.34■□□□□ 0.05
Ccdc9-201ENSMUST00000041010 P01745 121 aa15.33■□□□□ 0.04
Ccdc9-201ENSMUST00000041010 GhrhP16043 103 aa15.33■□□□□ 0.04
Ccdc9-201ENSMUST00000041010 Ifitm6A0A1B0GS75 124 aa15.33■□□□□ 0.04
Ccdc9-201ENSMUST00000041010 Gm7849D3YX03 116 aa15.33■□□□□ 0.04
Ccdc9-201ENSMUST00000041010 Fam110dQ80X91 271 aa15.32■□□□□ 0.04
Ccdc9-201ENSMUST00000041010 Ube2d4D3YUH6 135 aa15.32■□□□□ 0.04
Ccdc9-201ENSMUST00000041010 Reg3gO09049 174 aa15.32■□□□□ 0.04
Ccdc9-201ENSMUST00000041010 Pfn2Q9JJV2 140 aa15.32■□□□□ 0.04
Ccdc9-201ENSMUST00000041010 Crlf1Q9JM58 425 aa15.32■□□□□ 0.04
Ccdc9-201ENSMUST00000041010 BsnO88737 3942 aa15.31■□□□□ 0.04
Ccdc9-201ENSMUST00000041010 4930470P17RikQ9D542 155 aa15.31■□□□□ 0.04
Ccdc9-201ENSMUST00000041010 Gm7102J3QQ10 178 aa15.3■□□□□ 0.04
Ccdc9-201ENSMUST00000041010 P01786 117 aa15.3■□□□□ 0.04
Ccdc9-201ENSMUST00000041010 Krtap16-1A2A5X5 502 aa15.29■□□□□ 0.04
Ccdc9-201ENSMUST00000041010 Rpl36aP83882 106 aaKnown RBP15.29■□□□□ 0.04
Ccdc9-201ENSMUST00000041010 Smim26Q3V460 107 aa15.29■□□□□ 0.04
Ccdc9-201ENSMUST00000041010 Tmem223Q9CQE2 199 aaKnown RBP15.29■□□□□ 0.04
Ccdc9-201ENSMUST00000041010 Defb50Q6TU36 73 aa15.28■□□□□ 0.04
Ccdc9-201ENSMUST00000041010 Q99M08 65 aa15.28■□□□□ 0.04
Ccdc9-201ENSMUST00000041010 Usp9yF8VPU6 2556 aa15.27■□□□□ 0.04
Ccdc9-201ENSMUST00000041010 Trav13-4-dv7A0A075B6C2 110 aa15.27■□□□□ 0.04
Ccdc9-201ENSMUST00000041010 Spink1P09036 80 aa15.27■□□□□ 0.04
Ccdc9-201ENSMUST00000041010 MtorQ9JLN9 2549 aa15.25■□□□□ 0.03
Ccdc9-201ENSMUST00000041010 Gm9767G3X930 207 aa15.25■□□□□ 0.03
Ccdc9-201ENSMUST00000041010 CrygaP04345 174 aa15.25■□□□□ 0.03
Ccdc9-201ENSMUST00000041010 Trbv30A0A0B4J1P1 111 aa15.24■□□□□ 0.03
Ccdc9-201ENSMUST00000041010 Ppp1r32Q148A4 427 aa15.24■□□□□ 0.03
Ccdc9-201ENSMUST00000041010 Igkv1-99F6XWB2 120 aa15.24■□□□□ 0.03
Ccdc9-201ENSMUST00000041010 Mapk1ip1lQ8BH93 242 aa15.24■□□□□ 0.03
Ccdc9-201ENSMUST00000041010 Zfand2aQ9JII7 171 aa15.24■□□□□ 0.03
Ccdc9-201ENSMUST00000041010 P01755 137 aa15.22■□□□□ 0.03
Ccdc9-201ENSMUST00000041010 Chd6A3KFM7 2711 aa15.22■□□□□ 0.03
Ccdc9-201ENSMUST00000041010 Defa23Q5G866 93 aa15.21■□□□□ 0.03
Ccdc9-201ENSMUST00000041010 Ighv13-2A0A0A6YWN3 119 aa15.21■□□□□ 0.03
Ccdc9-201ENSMUST00000041010 Prp2P05143 317 aa15.21■□□□□ 0.03
Ccdc9-201ENSMUST00000041010 CrygeQ03740 174 aa15.21■□□□□ 0.03
Ccdc9-201ENSMUST00000041010 Gm10308Q9CVR5 141 aa15.21■□□□□ 0.03
Ccdc9-201ENSMUST00000041010 BaalcQ8VHV1 145 aa15.2■□□□□ 0.02
Ccdc9-201ENSMUST00000041010 Q9DAA7 145 aa15.2■□□□□ 0.02
Ccdc9-201ENSMUST00000041010 E130208F15RikQ3UPV3 143 aa15.2■□□□□ 0.02
Ccdc9-201ENSMUST00000041010 Zfp462B1AWL2 2495 aaKnown RBP15.19■□□□□ 0.02
Ccdc9-201ENSMUST00000041010 Trav13n-2A0A0G2JF93 110 aa15.19■□□□□ 0.02
Ccdc9-201ENSMUST00000041010 Gm3443F7CCV5 94 aa15.19■□□□□ 0.02
Ccdc9-201ENSMUST00000041010 Gm5142Q8C5X9 133 aa15.18■□□□□ 0.02
Ccdc9-201ENSMUST00000041010 Gm10845Q3UNY9 185 aa15.18■□□□□ 0.02
Ccdc9-201ENSMUST00000041010 B230359F08RikA0A0B4J1K3 109 aa15.17■□□□□ 0.02
Ccdc9-201ENSMUST00000041010 Fam19a1Q7TPG8 133 aa15.17■□□□□ 0.02
Ccdc9-201ENSMUST00000041010 Brk1Q91VR8 75 aa15.17■□□□□ 0.02
Ccdc9-201ENSMUST00000041010 EnhoQ8K1D8 76 aa15.16■□□□□ 0.02
Ccdc9-201ENSMUST00000041010 Rpl39lQ9CQD0 51 aa15.16■□□□□ 0.02
Ccdc9-201ENSMUST00000041010 Igkv8-21A0A140T8P7 120 aa15.15■□□□□ 0.02
Ccdc9-201ENSMUST00000041010 CubnQ9JLB4 3623 aa15.14■□□□□ 0.01
Ccdc9-201ENSMUST00000041010 Gm10337F7DEP7 55 aa15.14■□□□□ 0.01
Ccdc9-201ENSMUST00000041010 4930535I16RikQ9CUI2 172 aa15.14■□□□□ 0.01
Ccdc9-201ENSMUST00000041010 B230307C23RikQ8BLB2 64 aa15.13■□□□□ 0.01
Ccdc9-201ENSMUST00000041010 Ormdl1Q921I0 153 aa15.13■□□□□ 0.01
Ccdc9-201ENSMUST00000041010 MobpQ9D2P8 170 aa15.13■□□□□ 0.01
Ccdc9-201ENSMUST00000041010 Ighv10-3A0A075B5T6 119 aa15.12■□□□□ 0.01
Ccdc9-201ENSMUST00000041010 Ighv1-59A0A0A6YXE0 117 aa15.11■□□□□ 0.01
Ccdc9-201ENSMUST00000041010 CicQ924A2 2510 aa15.11■□□□□ 0.01
Ccdc9-201ENSMUST00000041010 Chd9Q8BYH8 2885 aa15.11■□□□□ 0.01
Ccdc9-201ENSMUST00000041010 Trav13d-4A0A0G2JFX3 110 aa15.1■□□□□ 0.01
Ccdc9-201ENSMUST00000041010 Gm10772F7AIG4 85 aa15.1■□□□□ 0.01
Ccdc9-201ENSMUST00000041010 Krtap24-1G3X9A2 248 aa15.1■□□□□ 0.01
Ccdc9-201ENSMUST00000041010 Notch3Q61982 2318 aa15.09■□□□□ 0.01
Ccdc9-201ENSMUST00000041010 Trav13-1A0A075B644 110 aa15.09■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 52.1 ms