RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Znf740Q6NZQ6 180 aa4.54□□□□□ -1.68
Lig4-202ENSMUST00000170033 Spink2Q8BMY7 86 aa4.54□□□□□ -1.68
Lig4-202ENSMUST00000170033 Cd164l2Q9D6W7 172 aa4.54□□□□□ -1.68
Lig4-202ENSMUST00000170033 Gm10767Q3TQP0 103 aa4.54□□□□□ -1.68
Lig4-202ENSMUST00000170033 Psors1c2Q80ZC9 134 aa4.54□□□□□ -1.68
Lig4-202ENSMUST00000170033 Chchd7Q8K2Q5 85 aa4.54□□□□□ -1.68
Lig4-202ENSMUST00000170033 Mpv17l2Q8VIK2 200 aa4.54□□□□□ -1.68
Lig4-202ENSMUST00000170033 Znf706Q9D115 76 aaKnown RBP4.54□□□□□ -1.68
Lig4-202ENSMUST00000170033 KalrnA2CG49 2964 aa4.54□□□□□ -1.68
Lig4-202ENSMUST00000170033 Zzef1Q5SSH7 2924 aa4.53□□□□□ -1.68
Lig4-202ENSMUST00000170033 FcorP0DJI6 106 aa4.53□□□□□ -1.68
Lig4-202ENSMUST00000170033 Tmem263Q9DAM7 115 aa4.53□□□□□ -1.68
Lig4-202ENSMUST00000170033 Ttc28Q80XJ3 2450 aa4.53□□□□□ -1.69
Lig4-202ENSMUST00000170033 1810032O08RikE9PZV8 113 aa4.52□□□□□ -1.69
Lig4-202ENSMUST00000170033 Gm2564F6Z9S8 108 aa4.52□□□□□ -1.69
Lig4-202ENSMUST00000170033 Igf1P05017 153 aa4.52□□□□□ -1.69
Lig4-202ENSMUST00000170033 Qrich2A0A140LIY9 2337 aa4.52□□□□□ -1.69
Lig4-202ENSMUST00000170033 Ighv3-8A0A075B5T0 131 aa4.52□□□□□ -1.69
Lig4-202ENSMUST00000170033 Ighv13-2A0A0A6YWN3 119 aa4.52□□□□□ -1.69
Lig4-202ENSMUST00000170033 Fam104aA2A6P4 185 aa4.52□□□□□ -1.69
Lig4-202ENSMUST00000170033 Ang3P97802 145 aa4.52□□□□□ -1.69
Lig4-202ENSMUST00000170033 SnurfQ9WU12 71 aa4.52□□□□□ -1.69
Lig4-202ENSMUST00000170033 Trav14-1A0A0G2JF94 121 aa4.52□□□□□ -1.69
Lig4-202ENSMUST00000170033 P01786 117 aa4.52□□□□□ -1.69
Lig4-202ENSMUST00000170033 Chtf8P0CG14 533 aa4.52□□□□□ -1.69
Lig4-202ENSMUST00000170033 P84751 237 aa4.52□□□□□ -1.69
Lig4-202ENSMUST00000170033 Pou2af1Q64693 256 aa4.52□□□□□ -1.69
Lig4-202ENSMUST00000170033 4930556J24RikQ9D4U7 146 aa4.52□□□□□ -1.69
Lig4-202ENSMUST00000170033 Gm10490F6VBM2 120 aa4.51□□□□□ -1.69
Lig4-202ENSMUST00000170033 Triap1Q9D8Z2 76 aa4.51□□□□□ -1.69
Lig4-202ENSMUST00000170033 1700074P13RikQ9D9G7 251 aa4.51□□□□□ -1.69
Lig4-202ENSMUST00000170033 Fam208bQ5DTT3 2382 aa4.51□□□□□ -1.69
Lig4-202ENSMUST00000170033 Ccl19O70460 108 aa4.51□□□□□ -1.69
Lig4-202ENSMUST00000170033 Rpl39P62892 51 aa4.51□□□□□ -1.69
Lig4-202ENSMUST00000170033 Pfn2Q9JJV2 140 aa4.51□□□□□ -1.69
Lig4-202ENSMUST00000170033 Gm9747Q810H1 104 aa4.5□□□□□ -1.69
Lig4-202ENSMUST00000170033 A530064D06RikQ8BNV8 229 aa4.5□□□□□ -1.69
Lig4-202ENSMUST00000170033 Dmxl2Q8BPN8 3032 aa4.5□□□□□ -1.69
Lig4-202ENSMUST00000170033 Ube2wQ8VDW4 151 aa4.5□□□□□ -1.69
Lig4-202ENSMUST00000170033 1700010B08RikQ9DAI7 102 aa4.5□□□□□ -1.69
Lig4-202ENSMUST00000170033 Gvin1Q80SU7 2427 aa4.5□□□□□ -1.69
Lig4-202ENSMUST00000170033 Zfhx3Q61329 3726 aa4.5□□□□□ -1.69
Lig4-202ENSMUST00000170033 Gm43218A0A0G2JGT0 114 aa4.5□□□□□ -1.69
Lig4-202ENSMUST00000170033 Gm10553J3QPF1 123 aa4.5□□□□□ -1.69
Lig4-202ENSMUST00000170033 Trav9-2A0A075B647 113 aa4.49□□□□□ -1.69
Lig4-202ENSMUST00000170033 Trav9-4A0A0B4J1K2 113 aa4.49□□□□□ -1.69
Lig4-202ENSMUST00000170033 C920008G01RikA0A0B4J1N1 112 aa4.49□□□□□ -1.69
Lig4-202ENSMUST00000170033 Klk9Q32M27 251 aa4.49□□□□□ -1.69
Lig4-202ENSMUST00000170033 Dad1P61804 113 aa4.49□□□□□ -1.69
Lig4-202ENSMUST00000170033 Gm10577Q3UDV9 132 aa4.49□□□□□ -1.69
Lig4-202ENSMUST00000170033 Nav2E9Q842 2432 aa4.49□□□□□ -1.69
Lig4-202ENSMUST00000170033 Muc4Q8JZM8 3443 aa4.49□□□□□ -1.69
Lig4-202ENSMUST00000170033 Sorl1O88307 2215 aaKnown RBP4.48□□□□□ -1.69
Lig4-202ENSMUST00000170033 Gm17521F6QAC8 156 aa4.48□□□□□ -1.69
Lig4-202ENSMUST00000170033 Gm3443F7CCV5 94 aa4.48□□□□□ -1.69
Lig4-202ENSMUST00000170033 Sh2d1aO88890 126 aa4.48□□□□□ -1.69
Lig4-202ENSMUST00000170033 A530084C06RikQ3UTW2 186 aa4.48□□□□□ -1.69
Lig4-202ENSMUST00000170033 Fam19a4Q7TPG5 135 aa4.48□□□□□ -1.69
Lig4-202ENSMUST00000170033 Mrpl35Q9CQL6 188 aa4.48□□□□□ -1.69
Lig4-202ENSMUST00000170033 Igkv2-137A0A0B4J1H6 120 aa4.48□□□□□ -1.69
Lig4-202ENSMUST00000170033 Gm7102J3QQ10 178 aa4.48□□□□□ -1.69
Lig4-202ENSMUST00000170033 Rnase1P00683 149 aa4.48□□□□□ -1.69
Lig4-202ENSMUST00000170033 Gm10300Q8C8P7 189 aa4.48□□□□□ -1.69
Lig4-202ENSMUST00000170033 CenpeQ6RT24 2474 aaKnown RBP4.48□□□□□ -1.69
Lig4-202ENSMUST00000170033 Trdv5A0A075B661 115 aa4.48□□□□□ -1.69
Lig4-202ENSMUST00000170033 P01738 130 aa4.48□□□□□ -1.69
Lig4-202ENSMUST00000170033 Cox6cQ9CPQ1 76 aa4.48□□□□□ -1.69
Lig4-202ENSMUST00000170033 Sec16aA2AIX1 2377 aa4.47□□□□□ -1.69
Lig4-202ENSMUST00000170033 Gm9887F6RFI0 207 aa4.47□□□□□ -1.69
Lig4-202ENSMUST00000170033 CrygaP04345 174 aa4.47□□□□□ -1.69
Lig4-202ENSMUST00000170033 Rpl36aP83882 106 aaKnown RBP4.47□□□□□ -1.69
Lig4-202ENSMUST00000170033 Ccl21aP84444 133 aa4.47□□□□□ -1.69
Lig4-202ENSMUST00000170033 Ccl21bP86792 133 aa4.47□□□□□ -1.69
Lig4-202ENSMUST00000170033 Ccl21cP86793 133 aa4.47□□□□□ -1.69
Lig4-202ENSMUST00000170033 Cmc4Q61908 68 aa4.47□□□□□ -1.69
Lig4-202ENSMUST00000170033 Zfp292Q9Z2U2 2698 aa4.47□□□□□ -1.69
Lig4-202ENSMUST00000170033 MsmbO08540 113 aa4.47□□□□□ -1.69
Lig4-202ENSMUST00000170033 Tmem258P61166 79 aa4.47□□□□□ -1.69
Lig4-202ENSMUST00000170033 Ifitm10Q8BR26 201 aa4.47□□□□□ -1.69
Lig4-202ENSMUST00000170033 DspE9Q557 2883 aaKnown RBP4.47□□□□□ -1.69
Lig4-202ENSMUST00000170033 4930546C10RikE9Q4Y3 121 aa4.46□□□□□ -1.69
Lig4-202ENSMUST00000170033 Lect2O88803 151 aa4.46□□□□□ -1.69
Lig4-202ENSMUST00000170033 Tmem254aP0DN89 123 aa4.46□□□□□ -1.69
Lig4-202ENSMUST00000170033 Tmem254bP0DN90 123 aa4.46□□□□□ -1.69
Lig4-202ENSMUST00000170033 Tmem254cP0DN91 123 aa4.46□□□□□ -1.69
Lig4-202ENSMUST00000170033 Eif4ebp3Q80VV3 101 aa4.46□□□□□ -1.69
Lig4-202ENSMUST00000170033 Kmt2bO08550 2713 aa4.46□□□□□ -1.7
Lig4-202ENSMUST00000170033 Igkv4-91A0A075B5L2 119 aa4.46□□□□□ -1.7
Lig4-202ENSMUST00000170033 Gm21748Q3UE70 102 aa4.46□□□□□ -1.7
Lig4-202ENSMUST00000170033 Gm815Q3UWS2 115 aa4.46□□□□□ -1.7
Lig4-202ENSMUST00000170033 Defb42Q8BVB5 75 aa4.46□□□□□ -1.7
Lig4-202ENSMUST00000170033 4930470P17RikQ9D542 155 aa4.46□□□□□ -1.7
Lig4-202ENSMUST00000170033 Znf414Q9DCK4 299 aa4.46□□□□□ -1.7
Lig4-202ENSMUST00000170033 Gm29423A0A087WRM1 55 aa4.46□□□□□ -1.7
Lig4-202ENSMUST00000170033 1700042G07RikB1AUF7 90 aa4.46□□□□□ -1.7
Lig4-202ENSMUST00000170033 Defa27F2Z403 93 aa4.46□□□□□ -1.7
Lig4-202ENSMUST00000170033 Xcl1P47993 114 aa4.46□□□□□ -1.7
Lig4-202ENSMUST00000170033 Hist1h4aP62806 103 aaKnown RBP4.46□□□□□ -1.7
Lig4-202ENSMUST00000170033 Spata25Q9DA57 226 aa4.46□□□□□ -1.7
Lig4-202ENSMUST00000170033 Fbn2Q61555 2907 aa4.45□□□□□ -1.7
Retrieved 100 of 22,080 RNA–protein pairs in 60.7 ms