RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Fgf23Q9EPC2 251 aa11.19□□□□□ -0.62
Trim39-203ENSMUST00000113706 Gm45717A0A1B0GT68 152 aa11.19□□□□□ -0.62
Trim39-203ENSMUST00000113706 Spink1P09036 80 aa11.19□□□□□ -0.62
Trim39-203ENSMUST00000113706 BC106179Q8C9L1 186 aa11.19□□□□□ -0.62
Trim39-203ENSMUST00000113706 Tmem101Q91VP7 257 aa11.19□□□□□ -0.62
Trim39-203ENSMUST00000113706 Ighv8-5A0A0A6YY60 119 aa11.18□□□□□ -0.62
Trim39-203ENSMUST00000113706 Gm45785A0A1B0GT05 94 aa11.18□□□□□ -0.62
Trim39-203ENSMUST00000113706 Notch2O35516 2470 aa11.18□□□□□ -0.62
Trim39-203ENSMUST00000113706 Cox7a1P56392 80 aa11.18□□□□□ -0.62
Trim39-203ENSMUST00000113706 Rpl24Q8BP67 157 aaKnown RBP11.18□□□□□ -0.62
Trim39-203ENSMUST00000113706 Slamf6Q9ET39 351 aa11.18□□□□□ -0.62
Trim39-203ENSMUST00000113706 Hint1P70349 126 aaKnown RBP11.17□□□□□ -0.62
Trim39-203ENSMUST00000113706 Trav13d-1A0A075B606 110 aa11.16□□□□□ -0.62
Trim39-203ENSMUST00000113706 Cox11Q6P8I6 275 aa11.16□□□□□ -0.62
Trim39-203ENSMUST00000113706 Znf740Q6NZQ6 180 aa11.16□□□□□ -0.62
Trim39-203ENSMUST00000113706 Leap2Q91V13 76 aa11.16□□□□□ -0.62
Trim39-203ENSMUST00000113706 Defa3P28310 93 aa11.15□□□□□ -0.62
Trim39-203ENSMUST00000113706 Defa10P50708 93 aa11.15□□□□□ -0.62
Trim39-203ENSMUST00000113706 Defa15P50713 93 aa11.15□□□□□ -0.62
Trim39-203ENSMUST00000113706 Tcf24V9GWT9 166 aa11.15□□□□□ -0.62
Trim39-203ENSMUST00000113706 Gm20730A0A075B5J6 119 aa11.15□□□□□ -0.62
Trim39-203ENSMUST00000113706 D730001G18RikA0A087WQU7 115 aa11.15□□□□□ -0.62
Trim39-203ENSMUST00000113706 Ifitm10Q8BR26 201 aa11.15□□□□□ -0.62
Trim39-203ENSMUST00000113706 Igkv4-79A0A075B5L8 119 aa11.14□□□□□ -0.63
Trim39-203ENSMUST00000113706 Igkv4-54A0A0G2JES9 117 aa11.14□□□□□ -0.63
Trim39-203ENSMUST00000113706 Gm10772F7AIG4 85 aa11.14□□□□□ -0.63
Trim39-203ENSMUST00000113706 Plac8l1Q08EJ0 177 aa11.14□□□□□ -0.63
Trim39-203ENSMUST00000113706 Tac4Q99N14 128 aa11.14□□□□□ -0.63
Trim39-203ENSMUST00000113706 Morn5Q9DAI9 170 aa11.14□□□□□ -0.63
Trim39-203ENSMUST00000113706 CrygaP04345 174 aa11.14□□□□□ -0.63
Trim39-203ENSMUST00000113706 Ly6gP35461 111 aa11.14□□□□□ -0.63
Trim39-203ENSMUST00000113706 Cmc4Q61908 68 aa11.14□□□□□ -0.63
Trim39-203ENSMUST00000113706 Gm7138L7N2C3 230 aa11.14□□□□□ -0.63
Trim39-203ENSMUST00000113706 CckP09240 115 aa11.14□□□□□ -0.63
Trim39-203ENSMUST00000113706 Rmi2Q3UPE3 149 aa11.14□□□□□ -0.63
Trim39-203ENSMUST00000113706 Try10Q792Z1 246 aaKnown RBP11.14□□□□□ -0.63
Trim39-203ENSMUST00000113706 Ociad2Q9D8W7 154 aa11.14□□□□□ -0.63
Trim39-203ENSMUST00000113706 Gm3238W4VSP7 230 aa11.14□□□□□ -0.63
Trim39-203ENSMUST00000113706 NpwA0A1L1STR8 176 aa11.13□□□□□ -0.63
Trim39-203ENSMUST00000113706 Gm933J3QPC1 141 aa11.13□□□□□ -0.63
Trim39-203ENSMUST00000113706 Srrm2Q8BTI8 2703 aaKnown RBP11.13□□□□□ -0.63
Trim39-203ENSMUST00000113706 Ighv1-49A0A0A6YWX2 117 aa11.13□□□□□ -0.63
Trim39-203ENSMUST00000113706 Gm10542F6XDR3 90 aa11.13□□□□□ -0.63
Trim39-203ENSMUST00000113706 Sh2d1aO88890 126 aa11.13□□□□□ -0.63
Trim39-203ENSMUST00000113706 Il1f10Q8R459 152 aa11.13□□□□□ -0.63
Trim39-203ENSMUST00000113706 Igkv4-72A0A0B4J1I4 117 aa11.12□□□□□ -0.63
Trim39-203ENSMUST00000113706 Fam240bJ3QMB3 78 aa11.12□□□□□ -0.63
Trim39-203ENSMUST00000113706 Insl3O09107 122 aa11.12□□□□□ -0.63
Trim39-203ENSMUST00000113706 Tfpi2O35536 230 aa11.12□□□□□ -0.63
Trim39-203ENSMUST00000113706 PolqQ8CGS6 2544 aa11.12□□□□□ -0.63
Trim39-203ENSMUST00000113706 Spink4O35679 86 aa11.11□□□□□ -0.63
Trim39-203ENSMUST00000113706 Cdc42se2Q8BGH7 84 aa11.11□□□□□ -0.63
Trim39-203ENSMUST00000113706 Rab37Q9JKM7 223 aa11.11□□□□□ -0.63
Trim39-203ENSMUST00000113706 Gm36176A0A1W2P8D5 158 aa11.1□□□□□ -0.63
Trim39-203ENSMUST00000113706 Ppp1r32Q148A4 427 aa11.1□□□□□ -0.63
Trim39-203ENSMUST00000113706 Wfdc17Q5SSJ1 76 aa11.1□□□□□ -0.63
Trim39-203ENSMUST00000113706 Gtf2h5Q8K2X8 71 aa11.1□□□□□ -0.63
Trim39-203ENSMUST00000113706 Shisa2Q8QZV2 295 aa11.1□□□□□ -0.63
Trim39-203ENSMUST00000113706 Igkv4-61A0A0G2JH00 117 aa11.1□□□□□ -0.63
Trim39-203ENSMUST00000113706 Ighv1-59A0A0A6YXE0 117 aa11.09□□□□□ -0.63
Trim39-203ENSMUST00000113706 Zc2hc1bQ9D534 172 aa11.09□□□□□ -0.63
Trim39-203ENSMUST00000113706 NrepQ07475 68 aa11.09□□□□□ -0.63
Trim39-203ENSMUST00000113706 ApcQ61315 2845 aa11.09□□□□□ -0.63
Trim39-203ENSMUST00000113706 Col6a5A6H584 2640 aa11.09□□□□□ -0.63
Trim39-203ENSMUST00000113706 E130114P18RikF6S0S7 154 aa11.09□□□□□ -0.63
Trim39-203ENSMUST00000113706 P01823 113 aa11.09□□□□□ -0.63
Trim39-203ENSMUST00000113706 P01745 121 aa11.08□□□□□ -0.64
Trim39-203ENSMUST00000113706 Hrct1Q9D6B9 109 aa11.08□□□□□ -0.64
Trim39-203ENSMUST00000113706 Gm43218A0A0G2JGT0 114 aa11.07□□□□□ -0.64
Trim39-203ENSMUST00000113706 Gm904Q3V2L5 102 aa11.07□□□□□ -0.64
Trim39-203ENSMUST00000113706 Foxc1Q61572 553 aa11.07□□□□□ -0.64
Trim39-203ENSMUST00000113706 4930442H23RikQ9D5G7 103 aa11.07□□□□□ -0.64
Trim39-203ENSMUST00000113706 4930432M17RikQ3V0W9 174 aa11.07□□□□□ -0.64
Trim39-203ENSMUST00000113706 Klk11Q9QYN3 276 aa11.07□□□□□ -0.64
Trim39-203ENSMUST00000113706 Trav4-3A0A0B4J1K1 110 aa11.06□□□□□ -0.64
Trim39-203ENSMUST00000113706 Dad1P61804 113 aa11.06□□□□□ -0.64
Trim39-203ENSMUST00000113706 BC048562Q80ZQ7 204 aa11.06□□□□□ -0.64
Trim39-203ENSMUST00000113706 Higd2aQ9CQJ1 106 aa11.05□□□□□ -0.64
Trim39-203ENSMUST00000113706 Gm6793B2RXM2 351 aa11.05□□□□□ -0.64
Trim39-203ENSMUST00000113706 Igkv4-53A0A0G2JFC6 119 aa11.05□□□□□ -0.64
Trim39-203ENSMUST00000113706 Prelid3aQ8VE85 172 aa11.05□□□□□ -0.64
Trim39-203ENSMUST00000113706 Klk9Q32M27 251 aa11.04□□□□□ -0.64
Trim39-203ENSMUST00000113706 RetnQ99P87 114 aa11.04□□□□□ -0.64
Trim39-203ENSMUST00000113706 Ighv1-62-1A0A075B5U3 116 aa11.04□□□□□ -0.64
Trim39-203ENSMUST00000113706 Spry2Q9QXV8 315 aa11.04□□□□□ -0.64
Trim39-203ENSMUST00000113706 Timm17bQ9Z0V7 172 aa11.04□□□□□ -0.64
Trim39-203ENSMUST00000113706 4930546C10RikE9Q4Y3 121 aa11.03□□□□□ -0.64
Trim39-203ENSMUST00000113706 Prp2P05143 317 aa11.03□□□□□ -0.64
Trim39-203ENSMUST00000113706 PrcdQ00LT2 53 aa11.03□□□□□ -0.64
Trim39-203ENSMUST00000113706 Phxr5P08399 672 aa11.03□□□□□ -0.64
Trim39-203ENSMUST00000113706 Vmo1Q5SXG7 201 aa11.03□□□□□ -0.64
Trim39-203ENSMUST00000113706 Gm9936Q8C864 160 aa11.03□□□□□ -0.64
Trim39-203ENSMUST00000113706 Tomm7Q9D173 55 aa11.03□□□□□ -0.64
Trim39-203ENSMUST00000113706 Glrp1E9Q9S8 174 aa11.02□□□□□ -0.64
Trim39-203ENSMUST00000113706 Rpl32-psP17932 135 aa11.02□□□□□ -0.64
Trim39-203ENSMUST00000113706 Atp6v0e2Q91XE7 81 aa11.02□□□□□ -0.65
Trim39-203ENSMUST00000113706 Spata45Q9CVW4 97 aa11.02□□□□□ -0.65
Trim39-203ENSMUST00000113706 Trav13n-1A0A0G2JEU8 110 aa11.01□□□□□ -0.65
Trim39-203ENSMUST00000113706 Defb10Q8R2I8 73 aa11.01□□□□□ -0.65
Trim39-203ENSMUST00000113706 Kmt2aP55200 3966 aa11.01□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 49.5 ms