RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 3110070M22RikQ9DAQ7 118 aa8.52□□□□□ -1.05
Trim50-202ENSMUST00000111180 Sec11aQ9R0P6 179 aa8.52□□□□□ -1.05
Trim50-202ENSMUST00000111180 Ube2d1P61080 147 aaKnown RBP8.51□□□□□ -1.05
Trim50-202ENSMUST00000111180 SeboxP70368 190 aa8.51□□□□□ -1.05
Trim50-202ENSMUST00000111180 Cox11Q6P8I6 275 aa8.51□□□□□ -1.05
Trim50-202ENSMUST00000111180 Bles03Q8VD62 251 aa8.51□□□□□ -1.05
Trim50-202ENSMUST00000111180 Gpx1P11352 201 aa8.51□□□□□ -1.05
Trim50-202ENSMUST00000111180 Ndufc2Q9CQ54 120 aa8.51□□□□□ -1.05
Trim50-202ENSMUST00000111180 Ankrd39Q9D2X0 183 aa8.51□□□□□ -1.05
Trim50-202ENSMUST00000111180 Q9D727 114 aa8.51□□□□□ -1.05
Trim50-202ENSMUST00000111180 Igkv4-79A0A075B5L8 119 aa8.5□□□□□ -1.05
Trim50-202ENSMUST00000111180 Gm12057A0A087WR21 115 aa8.5□□□□□ -1.05
Trim50-202ENSMUST00000111180 Zfp951A0A087WRH0 451 aa8.5□□□□□ -1.05
Trim50-202ENSMUST00000111180 Scgb1b19F6WYW0 93 aa8.5□□□□□ -1.05
Trim50-202ENSMUST00000111180 Rbx1P62878 108 aa8.5□□□□□ -1.05
Trim50-202ENSMUST00000111180 AplnQ9R0R4 77 aa8.5□□□□□ -1.05
Trim50-202ENSMUST00000111180 Brd3osA0A1B0GRB6 84 aa8.49□□□□□ -1.05
Trim50-202ENSMUST00000111180 Fam240aJ3QNP9 97 aa8.49□□□□□ -1.05
Trim50-202ENSMUST00000111180 LeprotO89013 131 aa8.49□□□□□ -1.05
Trim50-202ENSMUST00000111180 Cox7a2lQ61387 111 aa8.49□□□□□ -1.05
Trim50-202ENSMUST00000111180 Cryba4Q9JJV0 196 aa8.49□□□□□ -1.05
Trim50-202ENSMUST00000111180 Dnah7cA0A087WR13 4024 aa8.48□□□□□ -1.05
Trim50-202ENSMUST00000111180 Trav3-3Q5R1C3 114 aa8.48□□□□□ -1.05
Trim50-202ENSMUST00000111180 Mpv17l2Q8VIK2 200 aa8.48□□□□□ -1.05
Trim50-202ENSMUST00000111180 MobpQ9D2P8 170 aa8.48□□□□□ -1.05
Trim50-202ENSMUST00000111180 4930546C10RikE9Q4Y3 121 aa8.47□□□□□ -1.05
Trim50-202ENSMUST00000111180 Trappc1Q5NCF2 145 aa8.47□□□□□ -1.05
Trim50-202ENSMUST00000111180 Tmem223Q9CQE2 199 aaKnown RBP8.47□□□□□ -1.05
Trim50-202ENSMUST00000111180 Snhg11Q4G0K9 87 aa8.46□□□□□ -1.05
Trim50-202ENSMUST00000111180 PemtQ61907 199 aa8.46□□□□□ -1.05
Trim50-202ENSMUST00000111180 Hist2h2beQ64524 126 aa8.46□□□□□ -1.05
Trim50-202ENSMUST00000111180 Esp24A8R0V6 68 aa8.45□□□□□ -1.06
Trim50-202ENSMUST00000111180 Tfpi2O35536 230 aa8.45□□□□□ -1.06
Trim50-202ENSMUST00000111180 Ndufa1O35683 70 aa8.45□□□□□ -1.06
Trim50-202ENSMUST00000111180 P01837 106 aa8.45□□□□□ -1.06
Trim50-202ENSMUST00000111180 Gm10604Q3V0X7 143 aa8.45□□□□□ -1.06
Trim50-202ENSMUST00000111180 Gatd1Q8BFQ8 220 aa8.45□□□□□ -1.06
Trim50-202ENSMUST00000111180 Gm4861Q8C5A4 106 aa8.45□□□□□ -1.06
Trim50-202ENSMUST00000111180 Mustn1Q99JI1 82 aa8.45□□□□□ -1.06
Trim50-202ENSMUST00000111180 Defa35E9QLQ1 93 aa8.45□□□□□ -1.06
Trim50-202ENSMUST00000111180 Ca1P13634 261 aa8.45□□□□□ -1.06
Trim50-202ENSMUST00000111180 Cks1brtQ3UNC9 96 aa8.45□□□□□ -1.06
Trim50-202ENSMUST00000111180 2010109I03RikQ9CQ11 111 aa8.45□□□□□ -1.06
Trim50-202ENSMUST00000111180 Dnah7bL7N1Y0 4068 aa8.44□□□□□ -1.06
Trim50-202ENSMUST00000111180 Igkv3-1A0A075B5P1 119 aa8.44□□□□□ -1.06
Trim50-202ENSMUST00000111180 Gm45717A0A1B0GT68 152 aa8.44□□□□□ -1.06
Trim50-202ENSMUST00000111180 Gm28374F6SG70 93 aa8.44□□□□□ -1.06
Trim50-202ENSMUST00000111180 P0C913 63 aa8.44□□□□□ -1.06
Trim50-202ENSMUST00000111180 Tm4sf20Q9CQY8 226 aa8.44□□□□□ -1.06
Trim50-202ENSMUST00000111180 9430069I07RikQ9CX21 111 aa8.44□□□□□ -1.06
Trim50-202ENSMUST00000111180 Ssbp1Q9CYR0 152 aaKnown RBP8.44□□□□□ -1.06
Trim50-202ENSMUST00000111180 Ss18l2Q9D174 77 aa8.44□□□□□ -1.06
Trim50-202ENSMUST00000111180 Reg3bP35230 175 aa8.43□□□□□ -1.06
Trim50-202ENSMUST00000111180 Foxi2Q3I5G5 311 aa8.43□□□□□ -1.06
Trim50-202ENSMUST00000111180 E130208F15RikQ3UPV3 143 aa8.43□□□□□ -1.06
Trim50-202ENSMUST00000111180 Cfap126Q6P8X9 189 aa8.43□□□□□ -1.06
Trim50-202ENSMUST00000111180 PpdpfQ9CR37 115 aa8.43□□□□□ -1.06
Trim50-202ENSMUST00000111180 Trav7-6A0A075B640 112 aa8.42□□□□□ -1.06
Trim50-202ENSMUST00000111180 Hbb-bsA8DUK4 147 aa8.42□□□□□ -1.06
Trim50-202ENSMUST00000111180 Gm10542F6XDR3 90 aa8.42□□□□□ -1.06
Trim50-202ENSMUST00000111180 Hbb-b1P02088 147 aa8.42□□□□□ -1.06
Trim50-202ENSMUST00000111180 Rbm7Q9CQT2 265 aaKnown RBP8.42□□□□□ -1.06
Trim50-202ENSMUST00000111180 Gm11444F6QMA6 170 aa8.41□□□□□ -1.06
Trim50-202ENSMUST00000111180 Ighv2-9-1A0A075B697 116 aa8.4□□□□□ -1.06
Trim50-202ENSMUST00000111180 CrxO54751 299 aa8.4□□□□□ -1.06
Trim50-202ENSMUST00000111180 PolP10400 120 aa8.4□□□□□ -1.06
Trim50-202ENSMUST00000111180 Defa6P50704 93 aa8.4□□□□□ -1.06
Trim50-202ENSMUST00000111180 Stard9Q80TF6 4561 aa8.4□□□□□ -1.06
Trim50-202ENSMUST00000111180 Dnah1E9Q8T7 4250 aa8.4□□□□□ -1.06
Trim50-202ENSMUST00000111180 Vps13dB1ART2 4390 aa8.4□□□□□ -1.07
Trim50-202ENSMUST00000111180 Hsbp1l1B2RXB2 72 aa8.39□□□□□ -1.07
Trim50-202ENSMUST00000111180 Defa30E9QPZ2 93 aa8.39□□□□□ -1.07
Trim50-202ENSMUST00000111180 Cd33Q63994 403 aa8.39□□□□□ -1.07
Trim50-202ENSMUST00000111180 Prelid3aQ8VE85 172 aa8.39□□□□□ -1.07
Trim50-202ENSMUST00000111180 HilpdaQ9JLS0 64 aa8.39□□□□□ -1.07
Trim50-202ENSMUST00000111180 Trav4n-4A0A075B615 110 aa8.38□□□□□ -1.07
Trim50-202ENSMUST00000111180 Trav8-1A0A075B641 109 aa8.38□□□□□ -1.07
Trim50-202ENSMUST00000111180 Sprr1bQ62267 153 aa8.38□□□□□ -1.07
Trim50-202ENSMUST00000111180 Gm4064A0A087WR82 380 aa8.38□□□□□ -1.07
Trim50-202ENSMUST00000111180 Gm10352B2RWR6 380 aa8.38□□□□□ -1.07
Trim50-202ENSMUST00000111180 Rbmy1a1O35698 380 aa8.38□□□□□ -1.07
Trim50-202ENSMUST00000111180 Rbmy1bQ60990 380 aa8.38□□□□□ -1.07
Trim50-202ENSMUST00000111180 Plac1Q9JI83 173 aa8.38□□□□□ -1.07
Trim50-202ENSMUST00000111180 Igkv6-13A0A0G2JGY3 119 aa8.37□□□□□ -1.07
Trim50-202ENSMUST00000111180 Prp2P05143 317 aa8.37□□□□□ -1.07
Trim50-202ENSMUST00000111180 Krtap10-4Q08EG8 221 aa8.37□□□□□ -1.07
Trim50-202ENSMUST00000111180 Gm10295Q8CCF3 114 aa8.37□□□□□ -1.07
Trim50-202ENSMUST00000111180 Tspo2Q9CRZ8 162 aa8.37□□□□□ -1.07
Trim50-202ENSMUST00000111180 Gnb1lQ9EQ15 326 aa8.37□□□□□ -1.07
Trim50-202ENSMUST00000111180 Ccl17F6R5P4 103 aa8.36□□□□□ -1.07
Trim50-202ENSMUST00000111180 Gm9242J3QNY1 357 aa8.36□□□□□ -1.07
Trim50-202ENSMUST00000111180 Pcp4l1Q6W8Q3 68 aa8.36□□□□□ -1.07
Trim50-202ENSMUST00000111180 Hnrnpa3Q8BG05 379 aaKnown RBP8.36□□□□□ -1.07
Trim50-202ENSMUST00000111180 RetnQ99P87 114 aa8.36□□□□□ -1.07
Trim50-202ENSMUST00000111180 4930442H23RikQ9D5G7 103 aa8.36□□□□□ -1.07
Trim50-202ENSMUST00000111180 Ighv1-62-1A0A075B5U3 116 aa8.35□□□□□ -1.07
Trim50-202ENSMUST00000111180 Trav9n-4A0A075B631 113 aa8.35□□□□□ -1.07
Trim50-202ENSMUST00000111180 Defa2P28309 93 aa8.35□□□□□ -1.07
Trim50-202ENSMUST00000111180 EnhoQ8K1D8 76 aa8.35□□□□□ -1.07
Trim50-202ENSMUST00000111180 Uqcc3Q8K2T4 89 aa8.35□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 111.2 ms