RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 Gm10542F6XDR3 90 aa5.46□□□□□ -1.53
Bdnf-207ENSMUST00000111047 P06329 120 aa5.46□□□□□ -1.53
Bdnf-207ENSMUST00000111047 Trav9d-3A0A075B695 113 aa5.46□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Igkv4-68A0A0B4J1I7 117 aa5.46□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Spata25Q9DA57 226 aa5.46□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Dnal4Q9DCM4 105 aa5.46□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Smg1Q8BKX6 3658 aaKnown RBP5.46□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Eif4ebp1Q60876 117 aa5.46□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Itpr3P70227 2670 aa5.46□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Tomm7Q9D173 55 aa5.45□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Lelp1Q9DAE3 120 aa5.45□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Crip2Q9DCT8 208 aaKnown RBP5.45□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Myo18bE9PV66 2605 aa5.45□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Trav13n-1A0A0G2JEU8 110 aa5.45□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Prp2P05143 317 aa5.45□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Gm3443F7CCV5 94 aa5.45□□□□□ -1.54
Bdnf-207ENSMUST00000111047 4930432M17RikQ3V0W9 174 aa5.45□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Znf740Q6NZQ6 180 aa5.45□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Dand5Q76LW6 185 aa5.45□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Trav7-6A0A075B640 112 aa5.45□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Gm7257D3YX25 99 aa5.45□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Gm10322F7D7I4 111 aa5.45□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Srsf12Q8C8K3 266 aa5.45□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Shisa2Q8QZV2 295 aa5.45□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Zc2hc1bQ9D534 172 aa5.45□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Zfp462B1AWL2 2495 aaKnown RBP5.44□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Igkv4-78A0A0A6YYE5 119 aa5.44□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Lyrm9Q3UN90 78 aa5.44□□□□□ -1.54
Bdnf-207ENSMUST00000111047 1700010B08RikQ9DAI7 102 aa5.44□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Trav9d-4A0A0G2JG37 103 aa5.44□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Gm10135F6TEE5 83 aa5.44□□□□□ -1.54
Bdnf-207ENSMUST00000111047 PrlhG3UWC3 86 aa5.44□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Atp5g3P56384 141 aa5.44□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Ighv1-72P01751 139 aa5.44□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Fxyd5P97808 178 aa5.44□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Prss58Q8BW11 241 aa5.44□□□□□ -1.54
Bdnf-207ENSMUST00000111047 3110070M22RikQ9DAQ7 118 aa5.44□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Timm17bQ9Z0V7 172 aa5.44□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Setd2E9Q5F9 2537 aa5.43□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Gm17472A0A075B683 117 aa5.43□□□□□ -1.54
Bdnf-207ENSMUST00000111047 NpwA0A1L1STR8 176 aa5.43□□□□□ -1.54
Bdnf-207ENSMUST00000111047 5730596B20RikQ8BQ08 205 aa5.43□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Pfn2Q9JJV2 140 aa5.43□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Gm7544A0A1Y7VJ58 118 aa5.43□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Lst1O08843 95 aa5.43□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Cox7a1P56392 80 aa5.43□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Crlf1Q9JM58 425 aa5.43□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Epg5Q80TA9 2572 aa5.42□□□□□ -1.54
Bdnf-207ENSMUST00000111047 P01823 113 aa5.42□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Bles03Q8VD62 251 aa5.42□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Hectd1Q69ZR2 2618 aaKnown RBP5.42□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Ankrd17Q99NH0 2603 aaKnown RBP5.42□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Cox6b1P56391 86 aaKnown RBP5.42□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Lage3Q9CR70 148 aa5.42□□□□□ -1.54
Bdnf-207ENSMUST00000111047 C2cd3Q52KB6 2323 aa5.42□□□□□ -1.54
Bdnf-207ENSMUST00000111047 SelenowP63300 88 aa5.42□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Gm9922Q8C3P1 144 aa5.41□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Ankrd11E9Q4F7 2643 aa5.41□□□□□ -1.54
Bdnf-207ENSMUST00000111047 P01729 129 aa5.41□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Ighv1-61P01749 117 aa5.41□□□□□ -1.54
Bdnf-207ENSMUST00000111047 AngP21570 145 aa5.41□□□□□ -1.54
Bdnf-207ENSMUST00000111047 AI854703Q8BIN3 203 aa5.41□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Ighv1-62-1A0A075B5U3 116 aa5.41□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Defb42Q8BVB5 75 aa5.41□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Igkv4-79A0A075B5L8 119 aa5.4□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Zfp951A0A087WRH0 451 aa5.4□□□□□ -1.54
Bdnf-207ENSMUST00000111047 GfyJ3KML8 504 aa5.4□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Atp5g1Q9CR84 136 aa5.4□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Hivep3A2A884 2348 aa5.4□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Gm11565A2A4M7 156 aa5.4□□□□□ -1.54
Bdnf-207ENSMUST00000111047 4930518I15RikQ3V2W7 57 aa5.4□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Ndufa12Q7TMF3 145 aaKnown RBP5.4□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Morn3Q8C5T4 241 aa5.4□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Q8R092 253 aa5.4□□□□□ -1.54
Bdnf-207ENSMUST00000111047 Lama5Q61001 3718 aa5.4□□□□□ -1.55
Bdnf-207ENSMUST00000111047 PemtQ61907 199 aa5.4□□□□□ -1.55
Bdnf-207ENSMUST00000111047 Gm9747Q810H1 104 aa5.4□□□□□ -1.55
Bdnf-207ENSMUST00000111047 9430069I07RikQ9CX21 111 aa5.4□□□□□ -1.55
Bdnf-207ENSMUST00000111047 Trav13-4-dv7A0A075B6C2 110 aa5.39□□□□□ -1.55
Bdnf-207ENSMUST00000111047 Pglyrp4Q0VB07 374 aa5.39□□□□□ -1.55
Bdnf-207ENSMUST00000111047 Defa23Q5G866 93 aa5.39□□□□□ -1.55
Bdnf-207ENSMUST00000111047 Vmo1Q5SXG7 201 aa5.39□□□□□ -1.55
Bdnf-207ENSMUST00000111047 Esm1Q9QYY7 184 aa5.39□□□□□ -1.55
Bdnf-207ENSMUST00000111047 Gm16381A0A1Y7VKT9 73 aa5.39□□□□□ -1.55
Bdnf-207ENSMUST00000111047 SbsponQ3UPR9 264 aa5.39□□□□□ -1.55
Bdnf-207ENSMUST00000111047 Gm4861Q8C5A4 106 aa5.39□□□□□ -1.55
Bdnf-207ENSMUST00000111047 Ly6hQ9WUC3 139 aa5.39□□□□□ -1.55
Bdnf-207ENSMUST00000111047 Ubr5Q80TP3 2792 aa5.39□□□□□ -1.55
Bdnf-207ENSMUST00000111047 Unc79Q0KK59 2596 aa5.39□□□□□ -1.55
Bdnf-207ENSMUST00000111047 Samd13D3YUG0 102 aa5.39□□□□□ -1.55
Bdnf-207ENSMUST00000111047 Gm28374F6SG70 93 aa5.39□□□□□ -1.55
Bdnf-207ENSMUST00000111047 Gatd1Q8BFQ8 220 aa5.39□□□□□ -1.55
Bdnf-207ENSMUST00000111047 Igkv1-99F6XWB2 120 aa5.39□□□□□ -1.55
Bdnf-207ENSMUST00000111047 Fam19a5Q91WE9 132 aa5.39□□□□□ -1.55
Bdnf-207ENSMUST00000111047 Sh2d1aO88890 126 aa5.38□□□□□ -1.55
Bdnf-207ENSMUST00000111047 Defb29Q8BGW9 78 aa5.38□□□□□ -1.55
Bdnf-207ENSMUST00000111047 FlnaQ8BTM8 2647 aaKnown RBP5.38□□□□□ -1.55
Bdnf-207ENSMUST00000111047 Gm9887F6RFI0 207 aa5.38□□□□□ -1.55
Bdnf-207ENSMUST00000111047 Erdr1J3QMM0 206 aa5.38□□□□□ -1.55
Bdnf-207ENSMUST00000111047 Cdc42se2Q8BGH7 84 aa5.38□□□□□ -1.55
Retrieved 100 of 22,080 RNA–protein pairs in 108.7 ms