RNA–Protein interactions for RNA: ENSMUST00000109546.8

Vcan-203, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 12,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-203ENSMUST00000109546 Csrp1P97315 193 aaKnown RBP4.63□□□□□ -1.67
Vcan-203ENSMUST00000109546 Gm15557A6PWY0 234 aa4.63□□□□□ -1.67
Vcan-203ENSMUST00000109546 Trav13d-1A0A075B606 110 aa4.62□□□□□ -1.67
Vcan-203ENSMUST00000109546 Gm5153P01627 120 aa4.62□□□□□ -1.67
Vcan-203ENSMUST00000109546 P04944 107 aa4.62□□□□□ -1.67
Vcan-203ENSMUST00000109546 Lrp4Q8VI56 1905 aa4.62□□□□□ -1.67
Vcan-203ENSMUST00000109546 PinlypQ9CQD7 212 aa4.62□□□□□ -1.67
Vcan-203ENSMUST00000109546 Znf414Q9DCK4 299 aa4.62□□□□□ -1.67
Vcan-203ENSMUST00000109546 Spry4Q9WTP2 300 aa4.62□□□□□ -1.67
Vcan-203ENSMUST00000109546 Edn3P48299 214 aa4.62□□□□□ -1.67
Vcan-203ENSMUST00000109546 Igkv8-19A0A0G2JFN8 121 aa4.62□□□□□ -1.67
Vcan-203ENSMUST00000109546 Wfdc6bF6ULY1 148 aa4.62□□□□□ -1.67
Vcan-203ENSMUST00000109546 4930556J24RikQ9D4U7 146 aa4.61□□□□□ -1.67
Vcan-203ENSMUST00000109546 Ighv8-11A0A075B5X4 119 aa4.61□□□□□ -1.67
Vcan-203ENSMUST00000109546 Znrd1Q791N7 123 aa4.61□□□□□ -1.67
Vcan-203ENSMUST00000109546 Gm21060J3KMU4 56 aa4.61□□□□□ -1.67
Vcan-203ENSMUST00000109546 Gm37988J3QM41 62 aa4.61□□□□□ -1.67
Vcan-203ENSMUST00000109546 OdaphJ3QNT8 126 aa4.61□□□□□ -1.67
Vcan-203ENSMUST00000109546 Defb26Q30KN7 186 aa4.61□□□□□ -1.67
Vcan-203ENSMUST00000109546 Trav13-4-dv7A0A075B6C2 110 aa4.61□□□□□ -1.67
Vcan-203ENSMUST00000109546 Ighv2-2A0A075B5P8 116 aa4.61□□□□□ -1.67
Vcan-203ENSMUST00000109546 P01821 116 aa4.61□□□□□ -1.67
Vcan-203ENSMUST00000109546 1700084M14RikB1AT01 78 aa4.61□□□□□ -1.67
Vcan-203ENSMUST00000109546 Rspo1Q9Z132 265 aa4.61□□□□□ -1.67
Vcan-203ENSMUST00000109546 Tln1P26039 2541 aaKnown RBP4.6□□□□□ -1.67
Vcan-203ENSMUST00000109546 C130032M10RikQ8C888 123 aa4.6□□□□□ -1.67
Vcan-203ENSMUST00000109546 Gm9958Q8C9U4 106 aa4.6□□□□□ -1.67
Vcan-203ENSMUST00000109546 Ankhd1E9PUR0 2548 aaKnown RBP4.6□□□□□ -1.67
Vcan-203ENSMUST00000109546 Ighv2-3A0A075B696 115 aa4.6□□□□□ -1.67
Vcan-203ENSMUST00000109546 P06328 117 aa4.6□□□□□ -1.67
Vcan-203ENSMUST00000109546 Q9D8Q6 235 aa4.6□□□□□ -1.67
Vcan-203ENSMUST00000109546 Krtap16-1A2A5X5 502 aa4.6□□□□□ -1.67
Vcan-203ENSMUST00000109546 Wfdc15aQ8BH89 80 aa4.6□□□□□ -1.67
Vcan-203ENSMUST00000109546 Gm10542F6XDR3 90 aa4.6□□□□□ -1.67
Vcan-203ENSMUST00000109546 Q08AU9 97 aa4.6□□□□□ -1.67
Vcan-203ENSMUST00000109546 Gm9970F6ZED4 185 aa4.59□□□□□ -1.67
Vcan-203ENSMUST00000109546 Gm7257D3YX25 99 aa4.59□□□□□ -1.67
Vcan-203ENSMUST00000109546 P01823 113 aa4.59□□□□□ -1.67
Vcan-203ENSMUST00000109546 Ighv1-59A0A0A6YXE0 117 aa4.59□□□□□ -1.67
Vcan-203ENSMUST00000109546 Gm16485Q8C4B7 115 aa4.59□□□□□ -1.67
Vcan-203ENSMUST00000109546 Prol1E9PYQ4 312 aa4.59□□□□□ -1.67
Vcan-203ENSMUST00000109546 Ccl21aP84444 133 aa4.59□□□□□ -1.67
Vcan-203ENSMUST00000109546 Ccl21bP86792 133 aa4.59□□□□□ -1.67
Vcan-203ENSMUST00000109546 Ccl21cP86793 133 aa4.59□□□□□ -1.67
Vcan-203ENSMUST00000109546 Fhl1P97447 280 aaKnown RBP4.59□□□□□ -1.67
Vcan-203ENSMUST00000109546 Kmt2bO08550 2713 aa4.59□□□□□ -1.67
Vcan-203ENSMUST00000109546 Hivep2Q3UHF7 2430 aa4.59□□□□□ -1.67
Vcan-203ENSMUST00000109546 Gm10384Q3UQ87 92 aa4.59□□□□□ -1.67
Vcan-203ENSMUST00000109546 Trbv13-1A0A0B4J1P8 112 aa4.59□□□□□ -1.67
Vcan-203ENSMUST00000109546 Bean1Q9EQG5 255 aa4.59□□□□□ -1.67
Vcan-203ENSMUST00000109546 Ighv1-63A0A075B5X2 117 aa4.59□□□□□ -1.68
Vcan-203ENSMUST00000109546 Gm10160F6Y577 67 aa4.59□□□□□ -1.68
Vcan-203ENSMUST00000109546 Col9a3A2ACT7 680 aa4.59□□□□□ -1.68
Vcan-203ENSMUST00000109546 Chchd7Q8K2Q5 85 aa4.59□□□□□ -1.68
Vcan-203ENSMUST00000109546 B230359F08RikA0A0B4J1K3 109 aa4.58□□□□□ -1.68
Vcan-203ENSMUST00000109546 Notch2O35516 2470 aa4.58□□□□□ -1.68
Vcan-203ENSMUST00000109546 E030018B13RikJ3QMS9 113 aa4.58□□□□□ -1.68
Vcan-203ENSMUST00000109546 P84751 237 aa4.58□□□□□ -1.68
Vcan-203ENSMUST00000109546 4930524J08RikQ9CUJ5 163 aa4.58□□□□□ -1.68
Vcan-203ENSMUST00000109546 Chchd10Q7TNL9 138 aa4.58□□□□□ -1.68
Vcan-203ENSMUST00000109546 ElnP54320 860 aa4.58□□□□□ -1.68
Vcan-203ENSMUST00000109546 CnfnQ6PCW6 111 aa4.58□□□□□ -1.68
Vcan-203ENSMUST00000109546 SnurfQ9WU12 71 aa4.58□□□□□ -1.68
Vcan-203ENSMUST00000109546 IgipA0A1B0GR74 53 aa4.58□□□□□ -1.68
Vcan-203ENSMUST00000109546 Defb6Q91VD6 63 aa4.58□□□□□ -1.68
Vcan-203ENSMUST00000109546 Gm10549Q3URY4 149 aa4.58□□□□□ -1.68
Vcan-203ENSMUST00000109546 Tcte2E9PY37 120 aa4.57□□□□□ -1.68
Vcan-203ENSMUST00000109546 Higd2aQ9CQJ1 106 aa4.57□□□□□ -1.68
Vcan-203ENSMUST00000109546 P04943 107 aa4.57□□□□□ -1.68
Vcan-203ENSMUST00000109546 Ighv1-66A0A075B5X5 117 aa4.57□□□□□ -1.68
Vcan-203ENSMUST00000109546 Col24a1Q30D77 1733 aa4.57□□□□□ -1.68
Vcan-203ENSMUST00000109546 Spag11Q8K4N2 71 aa4.57□□□□□ -1.68
Vcan-203ENSMUST00000109546 Kiaa1549Q68FD9 1940 aa4.57□□□□□ -1.68
Vcan-203ENSMUST00000109546 Prp2P05143 317 aa4.56□□□□□ -1.68
Vcan-203ENSMUST00000109546 Itgbl1Q8VDV0 494 aa4.56□□□□□ -1.68
Vcan-203ENSMUST00000109546 Gm10845Q3UNY9 185 aa4.56□□□□□ -1.68
Vcan-203ENSMUST00000109546 Gm16503Q8C6M9 103 aa4.56□□□□□ -1.68
Vcan-203ENSMUST00000109546 A530084C06RikQ3UTW2 186 aa4.56□□□□□ -1.68
Vcan-203ENSMUST00000109546 Tns1E9Q0S6 1888 aaKnown RBP4.56□□□□□ -1.68
Vcan-203ENSMUST00000109546 3110082J24RikF6Z6Z2 108 aa4.56□□□□□ -1.68
Vcan-203ENSMUST00000109546 Ly6c1P0CW02 131 aa4.56□□□□□ -1.68
Vcan-203ENSMUST00000109546 B230104I21RikQ3USW4 141 aa4.56□□□□□ -1.68
Vcan-203ENSMUST00000109546 Ighv3-3A0A0A6YWL2 116 aa4.56□□□□□ -1.68
Vcan-203ENSMUST00000109546 P01728 117 aa4.56□□□□□ -1.68
Vcan-203ENSMUST00000109546 LhbO09108 141 aa4.56□□□□□ -1.68
Vcan-203ENSMUST00000109546 FcorP0DJI6 106 aa4.56□□□□□ -1.68
Vcan-203ENSMUST00000109546 Uqcr11Q9CPX8 56 aa4.56□□□□□ -1.68
Vcan-203ENSMUST00000109546 Elof1P60003 83 aa4.56□□□□□ -1.68
Vcan-203ENSMUST00000109546 Gm44973A0A140LJJ1 189 aa4.55□□□□□ -1.68
Vcan-203ENSMUST00000109546 Gm12057A0A087WR21 115 aa4.55□□□□□ -1.68
Vcan-203ENSMUST00000109546 Gm10267M0QWD8 85 aa4.55□□□□□ -1.68
Vcan-203ENSMUST00000109546 Foxs1Q61574 329 aa4.55□□□□□ -1.68
Vcan-203ENSMUST00000109546 Fam110dQ80X91 271 aa4.55□□□□□ -1.68
Vcan-203ENSMUST00000109546 Prok1Q14A28 105 aa4.55□□□□□ -1.68
Vcan-203ENSMUST00000109546 Cdc42se1Q8BHL7 80 aa4.55□□□□□ -1.68
Vcan-203ENSMUST00000109546 Pkd1l2Q7TN88 2461 aa4.55□□□□□ -1.68
Vcan-203ENSMUST00000109546 Esm1Q9QYY7 184 aa4.55□□□□□ -1.68
Vcan-203ENSMUST00000109546 1810032O08RikE9PZV8 113 aa4.55□□□□□ -1.68
Vcan-203ENSMUST00000109546 Gm10647E9Q8X0 124 aa4.55□□□□□ -1.68
Vcan-203ENSMUST00000109546 Prh1P05142 261 aa4.55□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 70.7 ms