RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Gm6793B2RXM2 351 aa11.02□□□□□ -0.65
Vcan-201ENSMUST00000109543 Rpl13aP19253 203 aaKnown RBP11.02□□□□□ -0.65
Vcan-201ENSMUST00000109543 Cdc42se2Q8BGH7 84 aa11.02□□□□□ -0.65
Vcan-201ENSMUST00000109543 Ndufa3Q9CQ91 84 aa11.02□□□□□ -0.65
Vcan-201ENSMUST00000109543 Cox7a1P56392 80 aa11.01□□□□□ -0.65
Vcan-201ENSMUST00000109543 CrygaP04345 174 aa11.01□□□□□ -0.65
Vcan-201ENSMUST00000109543 RetnQ99P87 114 aa11.01□□□□□ -0.65
Vcan-201ENSMUST00000109543 Myo18bE9PV66 2605 aa11□□□□□ -0.65
Vcan-201ENSMUST00000109543 P01745 121 aa11□□□□□ -0.65
Vcan-201ENSMUST00000109543 P01823 113 aa11□□□□□ -0.65
Vcan-201ENSMUST00000109543 Smrp1Q2MH31 260 aa11□□□□□ -0.65
Vcan-201ENSMUST00000109543 BC048562Q80ZQ7 204 aa11□□□□□ -0.65
Vcan-201ENSMUST00000109543 Ighv1-49A0A0A6YWX2 117 aa11□□□□□ -0.65
Vcan-201ENSMUST00000109543 Trav4-3A0A0B4J1K1 110 aa11□□□□□ -0.65
Vcan-201ENSMUST00000109543 Nhlrc1Q8BR37 401 aa11□□□□□ -0.65
Vcan-201ENSMUST00000109543 Hspg2Q05793 3707 aaKnown RBP10.99□□□□□ -0.65
Vcan-201ENSMUST00000109543 Tfpi2O35536 230 aa10.99□□□□□ -0.65
Vcan-201ENSMUST00000109543 Shisa2Q8QZV2 295 aa10.99□□□□□ -0.65
Vcan-201ENSMUST00000109543 Sh2d1aO88890 126 aa10.98□□□□□ -0.65
Vcan-201ENSMUST00000109543 Prp2P05143 317 aa10.98□□□□□ -0.65
Vcan-201ENSMUST00000109543 Gm10772F7AIG4 85 aa10.98□□□□□ -0.65
Vcan-201ENSMUST00000109543 4930432M17RikQ3V0W9 174 aa10.98□□□□□ -0.65
Vcan-201ENSMUST00000109543 Rpl32-psP17932 135 aa10.97□□□□□ -0.65
Vcan-201ENSMUST00000109543 Defb47Q30KN1 79 aa10.97□□□□□ -0.65
Vcan-201ENSMUST00000109543 Gm9936Q8C864 160 aa10.97□□□□□ -0.65
Vcan-201ENSMUST00000109543 4930415O20RikQ8CDT5 131 aa10.97□□□□□ -0.65
Vcan-201ENSMUST00000109543 Setd2E9Q5F9 2537 aa10.97□□□□□ -0.65
Vcan-201ENSMUST00000109543 Glrp1E9Q9S8 174 aa10.97□□□□□ -0.65
Vcan-201ENSMUST00000109543 Cby1Q9D1C2 127 aa10.96□□□□□ -0.65
Vcan-201ENSMUST00000109543 Timm17bQ9Z0V7 172 aa10.96□□□□□ -0.65
Vcan-201ENSMUST00000109543 Pla2g1bQ9Z0Y2 146 aa10.96□□□□□ -0.65
Vcan-201ENSMUST00000109543 Ighv1-62-1A0A075B5U3 116 aa10.96□□□□□ -0.66
Vcan-201ENSMUST00000109543 Trav13n-1A0A0G2JEU8 110 aa10.96□□□□□ -0.66
Vcan-201ENSMUST00000109543 Gm11020F6ZGD5 61 aa10.95□□□□□ -0.66
Vcan-201ENSMUST00000109543 Trav4d-3A0A075B625 110 aa10.95□□□□□ -0.66
Vcan-201ENSMUST00000109543 4930546C10RikE9Q4Y3 121 aa10.94□□□□□ -0.66
Vcan-201ENSMUST00000109543 Akap13E9Q394 2776 aa10.93□□□□□ -0.66
Vcan-201ENSMUST00000109543 CirbpP60824 172 aaKnown RBP10.93□□□□□ -0.66
Vcan-201ENSMUST00000109543 Igkv4-72A0A0B4J1I4 117 aa10.92□□□□□ -0.66
Vcan-201ENSMUST00000109543 Gm10135F6TEE5 83 aa10.92□□□□□ -0.66
Vcan-201ENSMUST00000109543 BatfO35284 125 aa10.92□□□□□ -0.66
Vcan-201ENSMUST00000109543 CdsnQ7TPC1 561 aa10.92□□□□□ -0.66
Vcan-201ENSMUST00000109543 Trav13-4-dv7A0A075B6C2 110 aa10.91□□□□□ -0.66
Vcan-201ENSMUST00000109543 Ppp1r32Q148A4 427 aa10.91□□□□□ -0.66
Vcan-201ENSMUST00000109543 Atp6v0e2Q91XE7 81 aa10.91□□□□□ -0.66
Vcan-201ENSMUST00000109543 1700010B08RikQ9DAI7 102 aa10.91□□□□□ -0.66
Vcan-201ENSMUST00000109543 Ighv1-61P01749 117 aa10.91□□□□□ -0.66
Vcan-201ENSMUST00000109543 CrygfQ9CXV3 174 aa10.91□□□□□ -0.66
Vcan-201ENSMUST00000109543 Tomm7Q9D173 55 aa10.91□□□□□ -0.66
Vcan-201ENSMUST00000109543 Spink4O35679 86 aa10.9□□□□□ -0.66
Vcan-201ENSMUST00000109543 Gm12057A0A087WR21 115 aa10.9□□□□□ -0.67
Vcan-201ENSMUST00000109543 Gm11444F6QMA6 170 aa10.9□□□□□ -0.67
Vcan-201ENSMUST00000109543 Dand5Q76LW6 185 aa10.9□□□□□ -0.67
Vcan-201ENSMUST00000109543 A830031A19RikQ8BNT5 113 aa10.9□□□□□ -0.67
Vcan-201ENSMUST00000109543 9430069I07RikQ9CX21 111 aa10.9□□□□□ -0.67
Vcan-201ENSMUST00000109543 MobpQ9D2P8 170 aa10.9□□□□□ -0.67
Vcan-201ENSMUST00000109543 Insl3O09107 122 aa10.89□□□□□ -0.67
Vcan-201ENSMUST00000109543 Sigmar1O55242 223 aa10.89□□□□□ -0.67
Vcan-201ENSMUST00000109543 Igkv4-54A0A0G2JES9 117 aa10.89□□□□□ -0.67
Vcan-201ENSMUST00000109543 Gm29423A0A087WRM1 55 aa10.88□□□□□ -0.67
Vcan-201ENSMUST00000109543 Gm43218A0A0G2JGT0 114 aa10.88□□□□□ -0.67
Vcan-201ENSMUST00000109543 Q8R092 253 aa10.88□□□□□ -0.67
Vcan-201ENSMUST00000109543 Gm28269A0A087WSG3 125 aa10.87□□□□□ -0.67
Vcan-201ENSMUST00000109543 Trav11A0A0B4J1J9 114 aa10.87□□□□□ -0.67
Vcan-201ENSMUST00000109543 Scgb1b24B1B0N6 92 aa10.87□□□□□ -0.67
Vcan-201ENSMUST00000109543 CrygdP04342 174 aa10.87□□□□□ -0.67
Vcan-201ENSMUST00000109543 CrygeQ03740 174 aa10.87□□□□□ -0.67
Vcan-201ENSMUST00000109543 Sostdc1Q9CQN4 206 aa10.87□□□□□ -0.67
Vcan-201ENSMUST00000109543 Eif4ebp3Q80VV3 101 aa10.87□□□□□ -0.67
Vcan-201ENSMUST00000109543 Leap2Q91V13 76 aa10.87□□□□□ -0.67
Vcan-201ENSMUST00000109543 Gm4861Q8C5A4 106 aa10.86□□□□□ -0.67
Vcan-201ENSMUST00000109543 Fbn1Q61554 2873 aaKnown RBP10.86□□□□□ -0.67
Vcan-201ENSMUST00000109543 Igkv4-53A0A0G2JFC6 119 aa10.86□□□□□ -0.67
Vcan-201ENSMUST00000109543 LbhQ9CX60 105 aa10.86□□□□□ -0.67
Vcan-201ENSMUST00000109543 Tenm4Q3UHK6 2771 aa10.85□□□□□ -0.67
Vcan-201ENSMUST00000109543 Trav9d-4A0A0G2JG37 103 aa10.85□□□□□ -0.67
Vcan-201ENSMUST00000109543 CicQ924A2 2510 aa10.85□□□□□ -0.67
Vcan-201ENSMUST00000109543 1700011M02RikB1AX35 88 aa10.85□□□□□ -0.67
Vcan-201ENSMUST00000109543 CenpwQ3URR0 86 aa10.85□□□□□ -0.67
Vcan-201ENSMUST00000109543 Trav3-1Q5R1I8 114 aa10.85□□□□□ -0.67
Vcan-201ENSMUST00000109543 Lgals4Q8K419 326 aa10.85□□□□□ -0.67
Vcan-201ENSMUST00000109543 Brwd1Q921C3 2304 aa10.84□□□□□ -0.67
Vcan-201ENSMUST00000109543 Trav13d-4A0A0G2JFX3 110 aa10.84□□□□□ -0.67
Vcan-201ENSMUST00000109543 Gm904Q3V2L5 102 aa10.84□□□□□ -0.67
Vcan-201ENSMUST00000109543 4930544G11RikQ9CR99 193 aa10.84□□□□□ -0.67
Vcan-201ENSMUST00000109543 Esm1Q9QYY7 184 aa10.84□□□□□ -0.67
Vcan-201ENSMUST00000109543 Igkv4-61A0A0G2JH00 117 aa10.84□□□□□ -0.67
Vcan-201ENSMUST00000109543 Ly6hQ9WUC3 139 aa10.84□□□□□ -0.67
Vcan-201ENSMUST00000109543 Ighv1-59A0A0A6YXE0 117 aa10.83□□□□□ -0.68
Vcan-201ENSMUST00000109543 Vmo1Q5SXG7 201 aa10.83□□□□□ -0.68
Vcan-201ENSMUST00000109543 Cox8cA6H666 72 aa10.83□□□□□ -0.68
Vcan-201ENSMUST00000109543 Tm2d2Q8R0I4 213 aa10.83□□□□□ -0.68
Vcan-201ENSMUST00000109543 D730001G18RikA0A087WQU7 115 aa10.82□□□□□ -0.68
Vcan-201ENSMUST00000109543 PrcdQ00LT2 53 aa10.82□□□□□ -0.68
Vcan-201ENSMUST00000109543 Dppa2Q9CWH0 301 aa10.82□□□□□ -0.68
Vcan-201ENSMUST00000109543 Zfand2aQ9JII7 171 aa10.82□□□□□ -0.68
Vcan-201ENSMUST00000109543 2310009B15RikA0A0A6YWI4 143 aa10.81□□□□□ -0.68
Vcan-201ENSMUST00000109543 Cops9Q3U898 57 aa10.81□□□□□ -0.68
Vcan-201ENSMUST00000109543 Q9DAQ5 155 aa10.81□□□□□ -0.68
Vcan-201ENSMUST00000109543 Odf3l2Q3TZ65 277 aa10.81□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 50.5 ms