RNA–Protein interactions for RNA: ENSMUST00000225246.1

Ssr1-203, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-203ENSMUST00000225246 Atp5eP56382 52 aa9.52□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Ube2wQ8VDW4 151 aa9.52□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Sptan1P16546 2472 aaKnown RBP9.52□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Trdv5A0A075B661 115 aa9.52□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Gm17472A0A075B683 117 aa9.52□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Gm29666A0A087WQ99 126 aa9.52□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Glrp1E9Q9S8 174 aa9.52□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Gm11444F6QMA6 170 aa9.52□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Gm21994F6T2D2 329 aa9.52□□□□□ -0.89
Ssr1-203ENSMUST00000225246 SvipQ3UZP4 77 aa9.52□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Morn3Q8C5T4 241 aa9.52□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Rmi2Q3UPE3 149 aa9.51□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Fam208bQ5DTT3 2382 aa9.5□□□□□ -0.89
Ssr1-203ENSMUST00000225246 2310009B15RikA0A0A6YWI4 143 aa9.5□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Cox6cQ9CPQ1 76 aa9.5□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Lyrm7Q9DA03 104 aa9.5□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Atp5g3P56384 141 aa9.49□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Srsf12Q8C8K3 266 aa9.49□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Fgf23Q9EPC2 251 aa9.49□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Rif1Q6PR54 2419 aaKnown RBP9.49□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Igkv4-78A0A0A6YYE5 119 aa9.49□□□□□ -0.89
Ssr1-203ENSMUST00000225246 4930415O20RikQ8CDT5 131 aa9.49□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Zc2hc1bQ9D534 172 aa9.49□□□□□ -0.89
Ssr1-203ENSMUST00000225246 1700010B08RikQ9DAI7 102 aa9.49□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Gm29423A0A087WRM1 55 aa9.48□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Wdr38Q9D994 303 aa9.48□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Trbv30A0A0B4J1P1 111 aa9.47□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Fam110dQ80X91 271 aa9.47□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Tmem101Q91VP7 257 aa9.47□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Gm20730A0A075B5J6 119 aa9.47□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Reg3gO09049 174 aa9.47□□□□□ -0.89
Ssr1-203ENSMUST00000225246 AngP21570 145 aa9.47□□□□□ -0.89
Ssr1-203ENSMUST00000225246 4930432M17RikQ3V0W9 174 aa9.47□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Armcx4E9PWM3 2356 aa9.47□□□□□ -0.89
Ssr1-203ENSMUST00000225246 Igkv4-91A0A075B5L2 119 aa9.46□□□□□ -0.9
Ssr1-203ENSMUST00000225246 Znf414Q9DCK4 299 aa9.46□□□□□ -0.9
Ssr1-203ENSMUST00000225246 Epg5Q80TA9 2572 aa9.46□□□□□ -0.9
Ssr1-203ENSMUST00000225246 Ankhd1E9PUR0 2548 aaKnown RBP9.45□□□□□ -0.9
Ssr1-203ENSMUST00000225246 Trav7-6A0A075B640 112 aa9.45□□□□□ -0.9
Ssr1-203ENSMUST00000225246 P01786 117 aa9.45□□□□□ -0.9
Ssr1-203ENSMUST00000225246 CirbpP60824 172 aaKnown RBP9.45□□□□□ -0.9
Ssr1-203ENSMUST00000225246 TrrapQ80YV3 2565 aaKnown RBP9.45□□□□□ -0.9
Ssr1-203ENSMUST00000225246 Klk1b4P00757 256 aa9.45□□□□□ -0.9
Ssr1-203ENSMUST00000225246 Trav13d-1A0A075B606 110 aa9.44□□□□□ -0.9
Ssr1-203ENSMUST00000225246 Fxyd5P97808 178 aa9.44□□□□□ -0.9
Ssr1-203ENSMUST00000225246 Cops9Q3U898 57 aa9.44□□□□□ -0.9
Ssr1-203ENSMUST00000225246 Eif4ebp3Q80VV3 101 aa9.44□□□□□ -0.9
Ssr1-203ENSMUST00000225246 4930470P17RikQ9D542 155 aa9.44□□□□□ -0.9
Ssr1-203ENSMUST00000225246 Prpf8Q99PV0 2335 aaKnown RBP9.43□□□□□ -0.9
Ssr1-203ENSMUST00000225246 Gm10767Q3TQP0 103 aa9.43□□□□□ -0.9
Ssr1-203ENSMUST00000225246 Gm815Q3UWS2 115 aa9.43□□□□□ -0.9
Ssr1-203ENSMUST00000225246 Q99M08 65 aa9.43□□□□□ -0.9
Ssr1-203ENSMUST00000225246 Ucn2Q99ML8 113 aa9.43□□□□□ -0.9
Ssr1-203ENSMUST00000225246 P01823 113 aa9.42□□□□□ -0.9
Ssr1-203ENSMUST00000225246 Gm28539A0A087WSL9 92 aa9.42□□□□□ -0.9
Ssr1-203ENSMUST00000225246 4930546C10RikE9Q4Y3 121 aa9.42□□□□□ -0.9
Ssr1-203ENSMUST00000225246 P01738 130 aa9.42□□□□□ -0.9
Ssr1-203ENSMUST00000225246 Gm10577Q3UDV9 132 aa9.42□□□□□ -0.9
Ssr1-203ENSMUST00000225246 HampQ9EQ21 83 aa9.42□□□□□ -0.9
Ssr1-203ENSMUST00000225246 Ang3P97802 145 aa9.41□□□□□ -0.9
Ssr1-203ENSMUST00000225246 Muc2Q80Z19 2680 aa9.41□□□□□ -0.9
Ssr1-203ENSMUST00000225246 Gm26661M0QWV4 156 aa9.4□□□□□ -0.9
Ssr1-203ENSMUST00000225246 Rnf183Q8QZS5 190 aa9.4□□□□□ -0.9
Ssr1-203ENSMUST00000225246 AY761184Q9D848 116 aa9.4□□□□□ -0.9
Ssr1-203ENSMUST00000225246 Ighv1-62-1A0A075B5U3 116 aa9.4□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Trav9n-2A0A0G2JDP3 113 aa9.4□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Gm3443F7CCV5 94 aa9.4□□□□□ -0.91
Ssr1-203ENSMUST00000225246 SbsponQ3UPR9 264 aa9.4□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Nhlrc1Q8BR37 401 aa9.4□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Xlr5cQ9JJR2 179 aa9.4□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Nbeal1E9PYP2 2688 aa9.39□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Sorl1O88307 2215 aaKnown RBP9.39□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Csmd2V9GX34 3611 aa9.39□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Gm8439G3UWA7 96 aa9.39□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Gm10251J3QPM5 127 aa9.39□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Gm10735Q3US96 136 aa9.39□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Gm904Q3V2L5 102 aa9.39□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Foxc1Q61572 553 aa9.39□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Sostdc1Q9CQN4 206 aa9.39□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Phpt1Q9DAK9 124 aa9.39□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Defb18Q30KP5 85 aa9.38□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Ly6hQ9WUC3 139 aa9.38□□□□□ -0.91
Ssr1-203ENSMUST00000225246 LrbaQ9ESE1 2856 aa9.38□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Igkv4-79A0A075B5L8 119 aa9.38□□□□□ -0.91
Ssr1-203ENSMUST00000225246 SpinklQ8CEK3 90 aa9.38□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Shisa2Q8QZV2 295 aa9.38□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Svep1A2AVA0 3567 aa9.37□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Gm9195A0A140LHT4 2805 aa9.37□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Tfpi2O35536 230 aa9.37□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Gm10549Q3URY4 149 aa9.37□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Cdc42se2Q8BGH7 84 aa9.37□□□□□ -0.91
Ssr1-203ENSMUST00000225246 9430069I07RikQ9CX21 111 aa9.37□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Col6a4A2AX52 2309 aa9.37□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Gm10542F6XDR3 90 aa9.36□□□□□ -0.91
Ssr1-203ENSMUST00000225246 SmcpP15265 143 aa9.36□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Rpl36aP83882 106 aaKnown RBP9.36□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Col7a1Q63870 2944 aa9.36□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Smim10l1A0A087WNQ7 89 aa9.35□□□□□ -0.91
Ssr1-203ENSMUST00000225246 Gm867A0A1W2P7T4 151 aa9.35□□□□□ -0.91
Ssr1-203ENSMUST00000225246 CrygaP04345 174 aa9.35□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 85.9 ms