RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Fam240aJ3QNP9 97 aa4.62□□□□□ -1.67
Lig4-202ENSMUST00000170033 Cd24P24807 76 aa4.62□□□□□ -1.67
Lig4-202ENSMUST00000170033 Mustn1Q99JI1 82 aa4.62□□□□□ -1.67
Lig4-202ENSMUST00000170033 Ighv8-5A0A0A6YY60 119 aa4.62□□□□□ -1.67
Lig4-202ENSMUST00000170033 Ube2d1P61080 147 aaKnown RBP4.62□□□□□ -1.67
Lig4-202ENSMUST00000170033 H1fxQ80ZM5 188 aa4.62□□□□□ -1.67
Lig4-202ENSMUST00000170033 Trav4-3A0A0B4J1K1 110 aa4.61□□□□□ -1.67
Lig4-202ENSMUST00000170033 Gm10322F7D7I4 111 aa4.61□□□□□ -1.67
Lig4-202ENSMUST00000170033 SbsponQ3UPR9 264 aa4.61□□□□□ -1.67
Lig4-202ENSMUST00000170033 Dopey2Q3UHQ6 2295 aa4.61□□□□□ -1.67
Lig4-202ENSMUST00000170033 Ighv1-58A0A075B5W9 117 aa4.61□□□□□ -1.67
Lig4-202ENSMUST00000170033 Ins1P01325 108 aa4.61□□□□□ -1.67
Lig4-202ENSMUST00000170033 Ube2d3P61079 147 aa4.61□□□□□ -1.67
Lig4-202ENSMUST00000170033 Ube2d2P62838 147 aa4.61□□□□□ -1.67
Lig4-202ENSMUST00000170033 Q9D8Q6 235 aa4.61□□□□□ -1.67
Lig4-202ENSMUST00000170033 LhbO09108 141 aa4.61□□□□□ -1.67
Lig4-202ENSMUST00000170033 PlaurP35456 327 aa4.61□□□□□ -1.67
Lig4-202ENSMUST00000170033 Defb18Q30KP5 85 aa4.61□□□□□ -1.67
Lig4-202ENSMUST00000170033 Il1f10Q8R459 152 aa4.61□□□□□ -1.67
Lig4-202ENSMUST00000170033 CrygfQ9CXV3 174 aa4.61□□□□□ -1.67
Lig4-202ENSMUST00000170033 Morn5Q9DAI9 170 aa4.61□□□□□ -1.67
Lig4-202ENSMUST00000170033 Pet100P0DJE0 76 aa4.6□□□□□ -1.67
Lig4-202ENSMUST00000170033 Defa21Q8C1P2 93 aa4.6□□□□□ -1.67
Lig4-202ENSMUST00000170033 Gemin7Q9CWY4 129 aa4.6□□□□□ -1.67
Lig4-202ENSMUST00000170033 Plac1Q9JI83 173 aa4.6□□□□□ -1.67
Lig4-202ENSMUST00000170033 Trav4d-3A0A075B625 110 aa4.6□□□□□ -1.67
Lig4-202ENSMUST00000170033 Igkv4-74A0A0B4J1I3 119 aa4.6□□□□□ -1.67
Lig4-202ENSMUST00000170033 Mrps12O35680 139 aa4.6□□□□□ -1.67
Lig4-202ENSMUST00000170033 Ighv1-72P01751 139 aa4.6□□□□□ -1.67
Lig4-202ENSMUST00000170033 TtrP07309 147 aa4.6□□□□□ -1.67
Lig4-202ENSMUST00000170033 Atp5eP56382 52 aa4.6□□□□□ -1.67
Lig4-202ENSMUST00000170033 Pglyrp4Q0VB07 374 aa4.6□□□□□ -1.67
Lig4-202ENSMUST00000170033 Defb47Q30KN1 79 aa4.6□□□□□ -1.67
Lig4-202ENSMUST00000170033 Rab37Q9JKM7 223 aa4.6□□□□□ -1.67
Lig4-202ENSMUST00000170033 Crlf1Q9JM58 425 aa4.6□□□□□ -1.67
Lig4-202ENSMUST00000170033 7530416G11RikJ3QJX6 159 aa4.59□□□□□ -1.67
Lig4-202ENSMUST00000170033 Rps28P62858 69 aaKnown RBP4.59□□□□□ -1.67
Lig4-202ENSMUST00000170033 Cystm1Q8K353 104 aa4.59□□□□□ -1.67
Lig4-202ENSMUST00000170033 PmvkQ9D1G2 192 aa4.59□□□□□ -1.67
Lig4-202ENSMUST00000170033 Dynlrb2Q9DAJ5 96 aa4.59□□□□□ -1.67
Lig4-202ENSMUST00000170033 Ptprz1B9EKR1 2312 aa4.59□□□□□ -1.68
Lig4-202ENSMUST00000170033 Trank1Q8BV79 2999 aa4.59□□□□□ -1.68
Lig4-202ENSMUST00000170033 Ighv2-3A0A075B696 115 aa4.59□□□□□ -1.68
Lig4-202ENSMUST00000170033 Csn3P06796 181 aa4.59□□□□□ -1.68
Lig4-202ENSMUST00000170033 Ros1Q78DX7 2340 aa4.58□□□□□ -1.68
Lig4-202ENSMUST00000170033 Piezo1E2JF22 2547 aa4.58□□□□□ -1.68
Lig4-202ENSMUST00000170033 Ncor2Q9WU42 2472 aaKnown RBP4.58□□□□□ -1.68
Lig4-202ENSMUST00000170033 BlcapP62951 87 aa4.58□□□□□ -1.68
Lig4-202ENSMUST00000170033 Tmem170bP86050 132 aa4.58□□□□□ -1.68
Lig4-202ENSMUST00000170033 Cd164Q9R0L9 197 aa4.58□□□□□ -1.68
Lig4-202ENSMUST00000170033 Ubr5Q80TP3 2792 aa4.58□□□□□ -1.68
Lig4-202ENSMUST00000170033 Abca4O35600 2310 aa4.58□□□□□ -1.68
Lig4-202ENSMUST00000170033 Gm17472A0A075B683 117 aa4.58□□□□□ -1.68
Lig4-202ENSMUST00000170033 C530025M09RikF6RGA8 229 aa4.58□□□□□ -1.68
Lig4-202ENSMUST00000170033 Gm10509O88255 85 aa4.58□□□□□ -1.68
Lig4-202ENSMUST00000170033 LeprotO89013 131 aa4.58□□□□□ -1.68
Lig4-202ENSMUST00000170033 CrebbpP45481 2441 aa4.58□□□□□ -1.68
Lig4-202ENSMUST00000170033 Gm9936Q8C864 160 aa4.58□□□□□ -1.68
Lig4-202ENSMUST00000170033 Cd99Q8VCN6 175 aa4.58□□□□□ -1.68
Lig4-202ENSMUST00000170033 3110018I06RikQ9CXS0 120 aa4.58□□□□□ -1.68
Lig4-202ENSMUST00000170033 Higd1aQ9JLR9 95 aa4.58□□□□□ -1.68
Lig4-202ENSMUST00000170033 Timm17bQ9Z0V7 172 aa4.58□□□□□ -1.68
Lig4-202ENSMUST00000170033 Tln1P26039 2541 aaKnown RBP4.58□□□□□ -1.68
Lig4-202ENSMUST00000170033 NpwA0A1L1STR8 176 aa4.57□□□□□ -1.68
Lig4-202ENSMUST00000170033 P01819 144 aa4.57□□□□□ -1.68
Lig4-202ENSMUST00000170033 Q5BN45 167 aa4.57□□□□□ -1.68
Lig4-202ENSMUST00000170033 Gm16223Q8CBM3 117 aa4.57□□□□□ -1.68
Lig4-202ENSMUST00000170033 Foxi1Q922I5 372 aa4.57□□□□□ -1.68
Lig4-202ENSMUST00000170033 Map1bP14873 2464 aaKnown RBP4.57□□□□□ -1.68
Lig4-202ENSMUST00000170033 A930009A15RikG3UYI6 118 aa4.57□□□□□ -1.68
Lig4-202ENSMUST00000170033 Cops9Q3U898 57 aa4.57□□□□□ -1.68
Lig4-202ENSMUST00000170033 Smg1Q8BKX6 3658 aaKnown RBP4.57□□□□□ -1.68
Lig4-202ENSMUST00000170033 Trav7-6A0A075B640 112 aa4.57□□□□□ -1.68
Lig4-202ENSMUST00000170033 Igkv4-68A0A0B4J1I7 117 aa4.57□□□□□ -1.68
Lig4-202ENSMUST00000170033 A830031A19RikQ8BNT5 113 aa4.57□□□□□ -1.68
Lig4-202ENSMUST00000170033 Dph3Q8K0W9 82 aa4.57□□□□□ -1.68
Lig4-202ENSMUST00000170033 Ighv1-11A0A0A6YWI9 117 aa4.56□□□□□ -1.68
Lig4-202ENSMUST00000170033 Wfdc15aQ8BH89 80 aa4.56□□□□□ -1.68
Lig4-202ENSMUST00000170033 3110070M22RikQ9DAQ7 118 aa4.56□□□□□ -1.68
Lig4-202ENSMUST00000170033 Klk11Q9QYN3 276 aa4.56□□□□□ -1.68
Lig4-202ENSMUST00000170033 Brd3osA0A1B0GRB6 84 aa4.56□□□□□ -1.68
Lig4-202ENSMUST00000170033 Gm42674D3YUT9 64 aa4.56□□□□□ -1.68
Lig4-202ENSMUST00000170033 Abca1P41233 2261 aa4.55□□□□□ -1.68
Lig4-202ENSMUST00000170033 Gm6040Q4QY32 63 aa4.55□□□□□ -1.68
Lig4-202ENSMUST00000170033 AI854703Q8BIN3 203 aa4.55□□□□□ -1.68
Lig4-202ENSMUST00000170033 Cspg4Q8VHY0 2327 aa4.55□□□□□ -1.68
Lig4-202ENSMUST00000170033 Gm10521E9PZK0 135 aa4.55□□□□□ -1.68
Lig4-202ENSMUST00000170033 Prelid3aQ8VE85 172 aa4.55□□□□□ -1.68
Lig4-202ENSMUST00000170033 Phlda3Q9WV95 125 aa4.55□□□□□ -1.68
Lig4-202ENSMUST00000170033 Prpf8Q99PV0 2335 aaKnown RBP4.55□□□□□ -1.68
Lig4-202ENSMUST00000170033 Defa28D3Z1V9 94 aa4.55□□□□□ -1.68
Lig4-202ENSMUST00000170033 Gm7075D3Z497 112 aa4.55□□□□□ -1.68
Lig4-202ENSMUST00000170033 Gm10160F6Y577 67 aa4.55□□□□□ -1.68
Lig4-202ENSMUST00000170033 Gm933J3QPC1 141 aa4.55□□□□□ -1.68
Lig4-202ENSMUST00000170033 Foxi2Q3I5G5 311 aa4.55□□□□□ -1.68
Lig4-202ENSMUST00000170033 Gm1553Q66VB7 94 aa4.55□□□□□ -1.68
Lig4-202ENSMUST00000170033 Q99M08 65 aa4.55□□□□□ -1.68
Lig4-202ENSMUST00000170033 Ighv2-7A0A075B5Q8 116 aa4.54□□□□□ -1.68
Lig4-202ENSMUST00000170033 Gm8439G3UWA7 96 aa4.54□□□□□ -1.68
Lig4-202ENSMUST00000170033 SrarpQ3ULG3 163 aa4.54□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 84.6 ms