RNA–Protein interactions for RNA: ENSMUST00000089332.4

Col8a1-201, Transcript of Collagen alpha-1(VIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col8a1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1-201ENSMUST00000089332 Trav13-4-dv7A0A075B6C2 110 aa9.14□□□□□ -0.95
Col8a1-201ENSMUST00000089332 P01659 112 aa9.14□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Gm10542F6XDR3 90 aa9.14□□□□□ -0.95
Col8a1-201ENSMUST00000089332 BikO70337 150 aa9.14□□□□□ -0.95
Col8a1-201ENSMUST00000089332 NpyP57774 97 aa9.14□□□□□ -0.95
Col8a1-201ENSMUST00000089332 P01674 108 aa9.14□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Rbmy1bQ60990 380 aa9.14□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Iglc1A0A0G2JE99 106 aa9.13□□□□□ -0.95
Col8a1-201ENSMUST00000089332 P01843 105 aa9.13□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Snai3Q9QY31 287 aa9.13□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Wisp2Q9Z0G4 251 aa9.13□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Gm4707V9GXN5 68 aa9.13□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Cyyr1Q8VIH7 165 aa9.13□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Gm37389A0A0A6YW05 95 aa9.12□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Trav13-1A0A075B644 110 aa9.12□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Spink10Q8CAC8 162 aa9.12□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Dscaml1Q4VA61 2053 aa9.12□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Tanc2A2A690 1994 aa9.12□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Ptpn13Q64512 2453 aa9.11□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Notch2O35516 2470 aa9.11□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Ighv1-63A0A075B5X2 117 aa9.11□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Psmb8P28063 276 aa9.11□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Gm42674D3YUT9 64 aa9.11□□□□□ -0.95
Col8a1-201ENSMUST00000089332 1110002E22RikE0CYV9 1786 aa9.11□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Tmem243B2RVB9 118 aa9.11□□□□□ -0.95
Col8a1-201ENSMUST00000089332 P01747 120 aa9.11□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Ighv1-5A0A0A6YWG2 117 aa9.11□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Gm6899Q3USS0 134 aa9.11□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Q9D8Q6 235 aa9.11□□□□□ -0.95
Col8a1-201ENSMUST00000089332 B230359F08RikA0A0B4J1K3 109 aa9.1□□□□□ -0.95
Col8a1-201ENSMUST00000089332 AngP21570 145 aa9.1□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Gm3618D3Z4P5 127 aa9.1□□□□□ -0.95
Col8a1-201ENSMUST00000089332 SbsponQ3UPR9 264 aa9.1□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Ighv2-6A0A075B6A7 116 aa9.1□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Klk12B2RVZ0 247 aa9.1□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Q9D131 166 aa9.1□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Sh2d1aO88890 126 aa9.1□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Ufsp1Q9CZP0 217 aa9.1□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Tax1bp3Q9DBG9 124 aa9.09□□□□□ -0.95
Col8a1-201ENSMUST00000089332 Pde6gP09174 87 aa9.09□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Trav13n-2A0A0G2JF93 110 aa9.08□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Gata1P17679 413 aa9.08□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Tet2Q4JK59 1912 aaKnown RBP9.08□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Igkv2-109A0A075B5K6 120 aa9.08□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Trav11A0A0B4J1J9 114 aa9.08□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Rbm3O89086 153 aaKnown RBP9.08□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Tmem258P61166 79 aa9.08□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Znf239P24399 201 aa9.08□□□□□ -0.96
Col8a1-201ENSMUST00000089332 A130051J06RikQ8CAU1 227 aa9.08□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Cryba4Q9JJV0 196 aa9.08□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Esm1Q9QYY7 184 aa9.08□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Hivep3A2A884 2348 aa9.08□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Fgfbp3Q1HCM0 245 aa9.07□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Edn2P22389 175 aa9.07□□□□□ -0.96
Col8a1-201ENSMUST00000089332 P0C913 63 aa9.07□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Znf575Q3TXZ1 239 aa9.07□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Myo9aQ8C170 2542 aa9.06□□□□□ -0.96
Col8a1-201ENSMUST00000089332 AcanQ61282 2132 aaKnown RBP9.06□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Fam222aQ6PGH4 453 aa9.06□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Fam19a1Q7TPG8 133 aa9.06□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Ormdl1Q921I0 153 aa9.06□□□□□ -0.96
Col8a1-201ENSMUST00000089332 CrygdP04342 174 aa9.05□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Pcsk5Q04592 1877 aa9.05□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Gm8439G3UWA7 96 aa9.05□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Prrc2aQ7TSC1 2158 aaKnown RBP9.05□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Gm10401E9Q3K6 71 aa9.05□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Usp9xP70398 2559 aaKnown RBP9.05□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Adamts20P59511 1906 aa9.04□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Ccdc179J3QM76 67 aa9.04□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Gm26602M0QWA4 95 aa9.04□□□□□ -0.96
Col8a1-201ENSMUST00000089332 1520401A03RikA0A0J9YVH6 598 aa9.04□□□□□ -0.96
Col8a1-201ENSMUST00000089332 9430015G10RikA2ASP7 199 aa9.04□□□□□ -0.96
Col8a1-201ENSMUST00000089332 PlaurP35456 327 aa9.04□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Ighv1-59A0A0A6YXE0 117 aa9.04□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Igkv1-35A0A0G2JDE5 120 aa9.04□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Gm20726G3UX18 150 aa9.04□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Wipf1Q8K1I7 493 aa9.03□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Tcl1b3P56842 122 aa9.03□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Fhl2O70433 279 aa9.03□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Chchd7Q8K2Q5 85 aa9.03□□□□□ -0.96
Col8a1-201ENSMUST00000089332 C2cd3Q52KB6 2323 aa9.03□□□□□ -0.96
Col8a1-201ENSMUST00000089332 PscaP57096 123 aa9.03□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Tfpi2O35536 230 aa9.02□□□□□ -0.96
Col8a1-201ENSMUST00000089332 Ankhd1E9PUR0 2548 aaKnown RBP9.02□□□□□ -0.97
Col8a1-201ENSMUST00000089332 Gm5629P06327 117 aa9.02□□□□□ -0.97
Col8a1-201ENSMUST00000089332 FcorP0DJI6 106 aa9.02□□□□□ -0.97
Col8a1-201ENSMUST00000089332 Rpl39lQ9CQD0 51 aa9.02□□□□□ -0.97
Col8a1-201ENSMUST00000089332 Naa38Q9D2U5 125 aa9.01□□□□□ -0.97
Col8a1-201ENSMUST00000089332 Ighv1-61P01749 117 aa9.01□□□□□ -0.97
Col8a1-201ENSMUST00000089332 PrlhG3UWC3 86 aa9.01□□□□□ -0.97
Col8a1-201ENSMUST00000089332 Triap1Q9D8Z2 76 aa9□□□□□ -0.97
Col8a1-201ENSMUST00000089332 Vpreb3D3Z6J4 130 aa9□□□□□ -0.97
Col8a1-201ENSMUST00000089332 SetxA2AKX3 2646 aa9□□□□□ -0.97
Col8a1-201ENSMUST00000089332 Igkv3-4A0A140T8Q4 119 aa9□□□□□ -0.97
Col8a1-201ENSMUST00000089332 Col4a4Q9QZR9 1682 aa9□□□□□ -0.97
Col8a1-201ENSMUST00000089332 Gm44965A0A0N4SVR3 59 aa8.99□□□□□ -0.97
Col8a1-201ENSMUST00000089332 Tmem254aP0DN89 123 aa8.99□□□□□ -0.97
Col8a1-201ENSMUST00000089332 Tmem254bP0DN90 123 aa8.99□□□□□ -0.97
Col8a1-201ENSMUST00000089332 Tmem254cP0DN91 123 aa8.99□□□□□ -0.97
Col8a1-201ENSMUST00000089332 Spink8Q09TK9 105 aa8.99□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 107.9 ms