RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Ndufa3Q9CQ91 84 aa6.19□□□□□ -1.42
Trim39-201ENSMUST00000042717 Tspo2Q9CRZ8 162 aa6.19□□□□□ -1.42
Trim39-201ENSMUST00000042717 Klf13Q9JJZ6 289 aa6.19□□□□□ -1.42
Trim39-201ENSMUST00000042717 Ccdc179J3QM76 67 aa6.18□□□□□ -1.42
Trim39-201ENSMUST00000042717 Dad1P61804 113 aa6.18□□□□□ -1.42
Trim39-201ENSMUST00000042717 Cmc4Q61908 68 aa6.18□□□□□ -1.42
Trim39-201ENSMUST00000042717 Ighv1-85A0A075B5Y6 117 aa6.18□□□□□ -1.42
Trim39-201ENSMUST00000042717 Trav13d-1A0A075B606 110 aa6.18□□□□□ -1.42
Trim39-201ENSMUST00000042717 Igkv4-54A0A0G2JES9 117 aa6.18□□□□□ -1.42
Trim39-201ENSMUST00000042717 Gm45753A0A1C7CYU8 86 aa6.18□□□□□ -1.42
Trim39-201ENSMUST00000042717 Gm867A0A1W2P7T4 151 aa6.18□□□□□ -1.42
Trim39-201ENSMUST00000042717 Gm26727M0QWT1 121 aa6.18□□□□□ -1.42
Trim39-201ENSMUST00000042717 Gata1P17679 413 aa6.18□□□□□ -1.42
Trim39-201ENSMUST00000042717 Rpl36aP83882 106 aaKnown RBP6.18□□□□□ -1.42
Trim39-201ENSMUST00000042717 Tmem170bP86050 132 aa6.18□□□□□ -1.42
Trim39-201ENSMUST00000042717 Cox7a2lQ61387 111 aa6.18□□□□□ -1.42
Trim39-201ENSMUST00000042717 Chchd7Q8K2Q5 85 aa6.18□□□□□ -1.42
Trim39-201ENSMUST00000042717 Sh2d1aO88890 126 aa6.17□□□□□ -1.42
Trim39-201ENSMUST00000042717 PlnP61014 52 aa6.17□□□□□ -1.42
Trim39-201ENSMUST00000042717 BtcQ05928 177 aa6.17□□□□□ -1.42
Trim39-201ENSMUST00000042717 4930596D02RikQ3V0H9 216 aa6.17□□□□□ -1.42
Trim39-201ENSMUST00000042717 Tomm6Q9CQN3 74 aa6.17□□□□□ -1.42
Trim39-201ENSMUST00000042717 F11rO88792 300 aa6.17□□□□□ -1.42
Trim39-201ENSMUST00000042717 P01745 121 aa6.17□□□□□ -1.42
Trim39-201ENSMUST00000042717 Sslp1Q3UN54 99 aa6.17□□□□□ -1.42
Trim39-201ENSMUST00000042717 Gm904Q3V2L5 102 aa6.17□□□□□ -1.42
Trim39-201ENSMUST00000042717 Il1f10Q8R459 152 aa6.17□□□□□ -1.42
Trim39-201ENSMUST00000042717 Mfap4Q9D1H9 257 aa6.17□□□□□ -1.42
Trim39-201ENSMUST00000042717 Ighv2-6A0A075B6A7 116 aa6.17□□□□□ -1.42
Trim39-201ENSMUST00000042717 Rpl36-ps4A0A140T8U4 117 aa6.17□□□□□ -1.42
Trim39-201ENSMUST00000042717 G0s2Q61585 103 aa6.17□□□□□ -1.42
Trim39-201ENSMUST00000042717 P06329 120 aa6.16□□□□□ -1.42
Trim39-201ENSMUST00000042717 Tmem101Q91VP7 257 aa6.16□□□□□ -1.42
Trim39-201ENSMUST00000042717 Vmn1r197Q8R265 298 aa6.16□□□□□ -1.42
Trim39-201ENSMUST00000042717 Gpha2Q925Q5 128 aa6.16□□□□□ -1.42
Trim39-201ENSMUST00000042717 Ighv1-49A0A0A6YWX2 117 aa6.15□□□□□ -1.42
Trim39-201ENSMUST00000042717 Igkv2-137A0A0B4J1H6 120 aa6.15□□□□□ -1.42
Trim39-201ENSMUST00000042717 Gm9887F6RFI0 207 aa6.15□□□□□ -1.42
Trim39-201ENSMUST00000042717 Phxr5P08399 672 aa6.15□□□□□ -1.42
Trim39-201ENSMUST00000042717 P0C913 63 aa6.15□□□□□ -1.42
Trim39-201ENSMUST00000042717 Fgfbp3Q1HCM0 245 aa6.15□□□□□ -1.42
Trim39-201ENSMUST00000042717 Klk5Q9D140 293 aa6.15□□□□□ -1.42
Trim39-201ENSMUST00000042717 Dnah10D3YYQ8 4591 aa6.15□□□□□ -1.42
Trim39-201ENSMUST00000042717 FcorP0DJI6 106 aa6.15□□□□□ -1.43
Trim39-201ENSMUST00000042717 Tmem97Q8VD00 176 aa6.15□□□□□ -1.43
Trim39-201ENSMUST00000042717 Pradc1Q9D9N8 188 aa6.15□□□□□ -1.43
Trim39-201ENSMUST00000042717 Trdv2-1A0A0G2JGB9 116 aa6.14□□□□□ -1.43
Trim39-201ENSMUST00000042717 Mtatp8P03930 67 aa6.14□□□□□ -1.43
Trim39-201ENSMUST00000042717 Prp2P05143 317 aa6.14□□□□□ -1.43
Trim39-201ENSMUST00000042717 P18527 97 aa6.14□□□□□ -1.43
Trim39-201ENSMUST00000042717 Mrpl52Q9D0Y8 121 aa6.14□□□□□ -1.43
Trim39-201ENSMUST00000042717 Klk11Q9QYN3 276 aa6.14□□□□□ -1.43
Trim39-201ENSMUST00000042717 P01729 129 aa6.14□□□□□ -1.43
Trim39-201ENSMUST00000042717 Ca1P13634 261 aa6.14□□□□□ -1.43
Trim39-201ENSMUST00000042717 Sec61gP60060 68 aa6.14□□□□□ -1.43
Trim39-201ENSMUST00000042717 BC048562Q80ZQ7 204 aa6.14□□□□□ -1.43
Trim39-201ENSMUST00000042717 Pmis2Q497Q9 96 aa6.14□□□□□ -1.43
Trim39-201ENSMUST00000042717 Q5BN45 167 aa6.14□□□□□ -1.43
Trim39-201ENSMUST00000042717 Fam19a4Q7TPG5 135 aa6.14□□□□□ -1.43
Trim39-201ENSMUST00000042717 Slc25a20Q9Z2Z6 301 aaKnown RBP6.14□□□□□ -1.43
Trim39-201ENSMUST00000042717 Igkv4-78A0A0A6YYE5 119 aa6.13□□□□□ -1.43
Trim39-201ENSMUST00000042717 Igkv4-72A0A0B4J1I4 117 aa6.13□□□□□ -1.43
Trim39-201ENSMUST00000042717 Esp24A8R0V6 68 aa6.13□□□□□ -1.43
Trim39-201ENSMUST00000042717 FcgbpE9Q0B5 2583 aa6.13□□□□□ -1.43
Trim39-201ENSMUST00000042717 Gm26602M0QWA4 95 aa6.13□□□□□ -1.43
Trim39-201ENSMUST00000042717 Rpl32P62911 135 aaKnown RBP6.13□□□□□ -1.43
Trim39-201ENSMUST00000042717 MturnQ8CGA4 131 aa6.13□□□□□ -1.43
Trim39-201ENSMUST00000042717 Tcrg-C1A0A075B5Z0 172 aa6.13□□□□□ -1.43
Trim39-201ENSMUST00000042717 Ighv1-59A0A0A6YXE0 117 aa6.13□□□□□ -1.43
Trim39-201ENSMUST00000042717 Tcrg-C3L7N479 172 aa6.13□□□□□ -1.43
Trim39-201ENSMUST00000042717 Trappc1Q5NCF2 145 aa6.13□□□□□ -1.43
Trim39-201ENSMUST00000042717 Gm1553Q66VB7 94 aa6.13□□□□□ -1.43
Trim39-201ENSMUST00000042717 Try10Q792Z1 246 aaKnown RBP6.13□□□□□ -1.43
Trim39-201ENSMUST00000042717 PpdpfQ9CR37 115 aa6.13□□□□□ -1.43
Trim39-201ENSMUST00000042717 Tomm7Q9D173 55 aa6.13□□□□□ -1.43
Trim39-201ENSMUST00000042717 Higd1aQ9JLR9 95 aa6.13□□□□□ -1.43
Trim39-201ENSMUST00000042717 Tcf24V9GWT9 166 aa6.13□□□□□ -1.43
Trim39-201ENSMUST00000042717 Gm45521A0A1B0GRK0 198 aa6.12□□□□□ -1.43
Trim39-201ENSMUST00000042717 Gm9242J3QNY1 357 aa6.12□□□□□ -1.43
Trim39-201ENSMUST00000042717 Cks1bP61025 79 aa6.12□□□□□ -1.43
Trim39-201ENSMUST00000042717 Ube2d3P61079 147 aa6.12□□□□□ -1.43
Trim39-201ENSMUST00000042717 Ube2d2P62838 147 aa6.12□□□□□ -1.43
Trim39-201ENSMUST00000042717 PrcdQ00LT2 53 aa6.12□□□□□ -1.43
Trim39-201ENSMUST00000042717 Ppp1r32Q148A4 427 aa6.12□□□□□ -1.43
Trim39-201ENSMUST00000042717 6430550D23RikE9Q1X6 194 aa6.12□□□□□ -1.43
Trim39-201ENSMUST00000042717 Gm21693J3QK27 380 aa6.12□□□□□ -1.43
Trim39-201ENSMUST00000042717 Atp5g3P56384 141 aa6.12□□□□□ -1.43
Trim39-201ENSMUST00000042717 Vmo1Q5SXG7 201 aa6.12□□□□□ -1.43
Trim39-201ENSMUST00000042717 Atp5g1Q9CR84 136 aa6.12□□□□□ -1.43
Trim39-201ENSMUST00000042717 Cox8bP48772 70 aa6.12□□□□□ -1.43
Trim39-201ENSMUST00000042717 Trav3-1Q5R1I8 114 aa6.12□□□□□ -1.43
Trim39-201ENSMUST00000042717 Foxc1Q61572 553 aa6.12□□□□□ -1.43
Trim39-201ENSMUST00000042717 Trav8-1A0A075B641 109 aa6.11□□□□□ -1.43
Trim39-201ENSMUST00000042717 Brd3osA0A1B0GRB6 84 aa6.11□□□□□ -1.43
Trim39-201ENSMUST00000042717 Defa35E9QLQ1 93 aa6.11□□□□□ -1.43
Trim39-201ENSMUST00000042717 Pkd1l1Q8R526 2615 aa6.11□□□□□ -1.43
Trim39-201ENSMUST00000042717 Gpx1P11352 201 aa6.11□□□□□ -1.43
Trim39-201ENSMUST00000042717 March3Q8BRX9 218 aa6.11□□□□□ -1.43
Trim39-201ENSMUST00000042717 Prss29Q99MS4 279 aa6.11□□□□□ -1.43
Trim39-201ENSMUST00000042717 Ighv6-7A0A0A6YWU3 119 aa6.1□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 72.9 ms