RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 P04940 107 aa14.06□□□□□ -0.16
Sort1-203ENSMUST00000135636 P04941 107 aa14.06□□□□□ -0.16
Sort1-203ENSMUST00000135636 Lmo4P61969 165 aa14.06□□□□□ -0.16
Sort1-203ENSMUST00000135636 Pla2g1bQ9Z0Y2 146 aa14.06□□□□□ -0.16
Sort1-203ENSMUST00000135636 Ighv1-62-2A0A0A6YXZ4 119 aa14.06□□□□□ -0.16
Sort1-203ENSMUST00000135636 PkdrejQ9Z0T6 2126 aa14.06□□□□□ -0.16
Sort1-203ENSMUST00000135636 Tanc2A2A690 1994 aa14.05□□□□□ -0.16
Sort1-203ENSMUST00000135636 Fgf6P21658 208 aa14.05□□□□□ -0.16
Sort1-203ENSMUST00000135636 LitafQ9JLJ0 161 aa14.05□□□□□ -0.16
Sort1-203ENSMUST00000135636 Abca4O35600 2310 aa14.05□□□□□ -0.16
Sort1-203ENSMUST00000135636 Ncor1Q60974 2453 aa14.04□□□□□ -0.16
Sort1-203ENSMUST00000135636 Bri3P28662 125 aa14.04□□□□□ -0.16
Sort1-203ENSMUST00000135636 1500011B03RikQ3TTH7 73 aa14.04□□□□□ -0.16
Sort1-203ENSMUST00000135636 Ncor2Q9WU42 2472 aaKnown RBP14.04□□□□□ -0.16
Sort1-203ENSMUST00000135636 Q9D8Q6 235 aa14.03□□□□□ -0.16
Sort1-203ENSMUST00000135636 1520401A03RikA0A0J9YVH6 598 aa14.03□□□□□ -0.16
Sort1-203ENSMUST00000135636 Gp9O88186 177 aa14.03□□□□□ -0.16
Sort1-203ENSMUST00000135636 Tcl1b5P56845 121 aa14.03□□□□□ -0.16
Sort1-203ENSMUST00000135636 Ube2d3P61079 147 aa14.03□□□□□ -0.16
Sort1-203ENSMUST00000135636 Pxt1Q8K459 51 aa14.03□□□□□ -0.16
Sort1-203ENSMUST00000135636 Gm17521F6QAC8 156 aa14.02□□□□□ -0.16
Sort1-203ENSMUST00000135636 Pla2g2cP48076 150 aa14.02□□□□□ -0.16
Sort1-203ENSMUST00000135636 Sprr3O09116 238 aa14.02□□□□□ -0.17
Sort1-203ENSMUST00000135636 Arhgef17Q80U35 2057 aa14.02□□□□□ -0.17
Sort1-203ENSMUST00000135636 BC107364E9Q5A2 140 aa14.02□□□□□ -0.17
Sort1-203ENSMUST00000135636 P01630 113 aa14.02□□□□□ -0.17
Sort1-203ENSMUST00000135636 GhrhP16043 103 aa14.02□□□□□ -0.17
Sort1-203ENSMUST00000135636 Col4a4Q9QZR9 1682 aa14.02□□□□□ -0.17
Sort1-203ENSMUST00000135636 Egr2P08152 470 aa14.01□□□□□ -0.17
Sort1-203ENSMUST00000135636 Ndufc2Q9CQ54 120 aa14.01□□□□□ -0.17
Sort1-203ENSMUST00000135636 Cacna1gQ5SUF7 2381 aa14.01□□□□□ -0.17
Sort1-203ENSMUST00000135636 A0A286YCN5 57 aa14.01□□□□□ -0.17
Sort1-203ENSMUST00000135636 Ccdc179J3QM76 67 aa14.01□□□□□ -0.17
Sort1-203ENSMUST00000135636 Fam19a4Q7TPG5 135 aa14.01□□□□□ -0.17
Sort1-203ENSMUST00000135636 Igkv3-7A0A0G2JE31 119 aa14□□□□□ -0.17
Sort1-203ENSMUST00000135636 Rbm3O89086 153 aaKnown RBP14□□□□□ -0.17
Sort1-203ENSMUST00000135636 Nup210Q9QY81 1886 aaKnown RBP14□□□□□ -0.17
Sort1-203ENSMUST00000135636 Col4a6B1AVK5 1691 aa14□□□□□ -0.17
Sort1-203ENSMUST00000135636 Rbmy1bQ60990 380 aa14□□□□□ -0.17
Sort1-203ENSMUST00000135636 4930442H23RikQ9D5G7 103 aa14□□□□□ -0.17
Sort1-203ENSMUST00000135636 Gm9767G3X930 207 aa13.99□□□□□ -0.17
Sort1-203ENSMUST00000135636 Ighv3-3A0A0A6YWL2 116 aa13.99□□□□□ -0.17
Sort1-203ENSMUST00000135636 9430097D07RikQ8BS47 195 aa13.99□□□□□ -0.17
Sort1-203ENSMUST00000135636 Foxi2Q3I5G5 311 aa13.99□□□□□ -0.17
Sort1-203ENSMUST00000135636 Gm15217A2CG07 155 aa13.99□□□□□ -0.17
Sort1-203ENSMUST00000135636 Trav7-6A0A075B640 112 aa13.98□□□□□ -0.17
Sort1-203ENSMUST00000135636 Ighv8-12A0A0G2JDE1 119 aa13.98□□□□□ -0.17
Sort1-203ENSMUST00000135636 Hist2h2beQ64524 126 aa13.98□□□□□ -0.17
Sort1-203ENSMUST00000135636 Dennd4cA6H8H2 1906 aa13.98□□□□□ -0.17
Sort1-203ENSMUST00000135636 PrlhG3UWC3 86 aa13.98□□□□□ -0.17
Sort1-203ENSMUST00000135636 Dopey2Q3UHQ6 2295 aa13.98□□□□□ -0.17
Sort1-203ENSMUST00000135636 Plac8l1Q08EJ0 177 aa13.98□□□□□ -0.17
Sort1-203ENSMUST00000135636 Fam222aQ6PGH4 453 aa13.98□□□□□ -0.17
Sort1-203ENSMUST00000135636 E130116L18RikQ8BMV6 101 aa13.98□□□□□ -0.17
Sort1-203ENSMUST00000135636 Ly6hQ9WUC3 139 aa13.98□□□□□ -0.17
Sort1-203ENSMUST00000135636 Zfand3Q497H0 227 aa13.97□□□□□ -0.17
Sort1-203ENSMUST00000135636 Cd33Q63994 403 aa13.97□□□□□ -0.17
Sort1-203ENSMUST00000135636 Igkv1-110A0A0B4J1I0 119 aa13.96□□□□□ -0.17
Sort1-203ENSMUST00000135636 Tmem223Q9CQE2 199 aaKnown RBP13.96□□□□□ -0.17
Sort1-203ENSMUST00000135636 Tomm6Q9CQN3 74 aa13.96□□□□□ -0.17
Sort1-203ENSMUST00000135636 Ighv10-3A0A075B5T6 119 aa13.96□□□□□ -0.18
Sort1-203ENSMUST00000135636 Znf664Q4VA44 261 aa13.96□□□□□ -0.18
Sort1-203ENSMUST00000135636 C920008G01RikA0A0B4J1N1 112 aa13.95□□□□□ -0.18
Sort1-203ENSMUST00000135636 DscamQ9ERC8 2013 aa13.95□□□□□ -0.18
Sort1-203ENSMUST00000135636 Ighv1-5A0A0A6YWG2 117 aa13.95□□□□□ -0.18
Sort1-203ENSMUST00000135636 Vsig4F6TUL9 280 aa13.95□□□□□ -0.18
Sort1-203ENSMUST00000135636 Plscr4P58196 326 aa13.95□□□□□ -0.18
Sort1-203ENSMUST00000135636 Gm14137Q8CE97 175 aa13.95□□□□□ -0.18
Sort1-203ENSMUST00000135636 P04942 107 aa13.95□□□□□ -0.18
Sort1-203ENSMUST00000135636 Mbd6Q3TY92 1003 aa13.95□□□□□ -0.18
Sort1-203ENSMUST00000135636 ScxQ64124 207 aa13.95□□□□□ -0.18
Sort1-203ENSMUST00000135636 AW146154Q3TPQ7 468 aa13.95□□□□□ -0.18
Sort1-203ENSMUST00000135636 Wfdc13Q5DQQ6 81 aa13.94□□□□□ -0.18
Sort1-203ENSMUST00000135636 Cfc1P97766 202 aa13.94□□□□□ -0.18
Sort1-203ENSMUST00000135636 Glrp1E9Q9S8 174 aa13.94□□□□□ -0.18
Sort1-203ENSMUST00000135636 CenpeQ6RT24 2474 aaKnown RBP13.94□□□□□ -0.18
Sort1-203ENSMUST00000135636 Gm20379A0A087WR34 119 aa13.93□□□□□ -0.18
Sort1-203ENSMUST00000135636 Gm9958Q8C9U4 106 aa13.93□□□□□ -0.18
Sort1-203ENSMUST00000135636 SptssbQ925E8 76 aa13.93□□□□□ -0.18
Sort1-203ENSMUST00000135636 A230072I06RikQ3UUJ8 172 aa13.93□□□□□ -0.18
Sort1-203ENSMUST00000135636 Rpl39lQ9CQD0 51 aa13.93□□□□□ -0.18
Sort1-203ENSMUST00000135636 P06328 117 aa13.92□□□□□ -0.18
Sort1-203ENSMUST00000135636 Crip1P63254 77 aa13.92□□□□□ -0.18
Sort1-203ENSMUST00000135636 Qrich2A0A140LIY9 2337 aa13.92□□□□□ -0.18
Sort1-203ENSMUST00000135636 Gm3285A0A1W2P7U0 201 aa13.92□□□□□ -0.18
Sort1-203ENSMUST00000135636 Ighv1-85A0A075B5Y6 117 aa13.92□□□□□ -0.18
Sort1-203ENSMUST00000135636 Eml6Q5SQM0 1958 aa13.91□□□□□ -0.18
Sort1-203ENSMUST00000135636 SycnQ8VCK7 134 aa13.91□□□□□ -0.18
Sort1-203ENSMUST00000135636 Rp1l1Q8CGM2 1859 aa13.91□□□□□ -0.18
Sort1-203ENSMUST00000135636 A130051J06RikQ8CAU1 227 aa13.91□□□□□ -0.18
Sort1-203ENSMUST00000135636 Adamts20P59511 1906 aa13.91□□□□□ -0.18
Sort1-203ENSMUST00000135636 Col6a6Q8C6K9 2265 aa13.91□□□□□ -0.18
Sort1-203ENSMUST00000135636 Sec61gP60060 68 aa13.91□□□□□ -0.18
Sort1-203ENSMUST00000135636 Vpreb3D3Z6J4 130 aa13.9□□□□□ -0.18
Sort1-203ENSMUST00000135636 P01728 117 aa13.9□□□□□ -0.18
Sort1-203ENSMUST00000135636 CrygcQ61597 174 aa13.9□□□□□ -0.18
Sort1-203ENSMUST00000135636 Adm2Q7TNK8 150 aa13.9□□□□□ -0.18
Sort1-203ENSMUST00000135636 Sdk1Q3UH53 2193 aa13.9□□□□□ -0.18
Sort1-203ENSMUST00000135636 Odf3l1Q810P2 275 aa13.9□□□□□ -0.19
Sort1-203ENSMUST00000135636 Tfpi2O35536 230 aa13.89□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 59.7 ms