RNA–Protein interactions for RNA: ENSMUST00000129241.2

Sptan1-208, Transcript of Spectrin alpha chain, non-erythrocytic 1, mousemouse

TSL 5 BASIC

Gene Sptan1, Length 7,585 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptan1-208ENSMUST00000129241 Trbv16A0A0B4J1H3 115 aa7.08□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Odf3l1Q810P2 275 aa7.08□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Gm17472A0A075B683 117 aa7.08□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Gata1P17679 413 aa7.08□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Ncor1Q60974 2453 aa7.08□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Iglv1A0A075B663 117 aa7.08□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Tmem243B2RVB9 118 aa7.08□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Dscaml1Q4VA61 2053 aa7.08□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Zfand3Q497H0 227 aa7.07□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Sptan1P16546 2472 aaKnown RBP7.07□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Trav13d-1A0A075B606 110 aa7.07□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Cox7b2Q9D2H1 82 aa7.07□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Ramp1Q9WTJ5 148 aa7.07□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Trav13n-1A0A0G2JEU8 110 aa7.07□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Gm10251J3QPM5 127 aa7.07□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Gm2916Q9D9B9 127 aa7.07□□□□□ -1.28
Sptan1-208ENSMUST00000129241 4930470P17RikQ9D542 155 aa7.07□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Tnfrsf23Q9ER63 176 aa7.07□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Igkv8-26A0A075B5N5 123 aa7.06□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Gm10518F6UQQ9 182 aa7.06□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Gm21060J3KMU4 56 aa7.06□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Rnase1P00683 149 aa7.06□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Ucn2Q99ML8 113 aa7.06□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Cdpf1Q8R3A2 119 aa7.06□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Gm26602M0QWA4 95 aa7.06□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Atp5g3P56384 141 aa7.06□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Fam19a4Q7TPG5 135 aa7.06□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Atp5g1Q9CR84 136 aa7.06□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Gata3P23772 443 aa7.05□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Obox8V9GWY9 217 aa7.05□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Trav13-4-dv7A0A075B6C2 110 aa7.05□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Igkv1-88A0A140T8N1 120 aa7.05□□□□□ -1.28
Sptan1-208ENSMUST00000129241 P01728 117 aa7.05□□□□□ -1.28
Sptan1-208ENSMUST00000129241 P01747 120 aa7.05□□□□□ -1.28
Sptan1-208ENSMUST00000129241 AngP21570 145 aa7.05□□□□□ -1.28
Sptan1-208ENSMUST00000129241 9430069I07RikQ9CX21 111 aa7.05□□□□□ -1.28
Sptan1-208ENSMUST00000129241 P01674 108 aa7.05□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Dopey2Q3UHQ6 2295 aa7.05□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Gm42674D3YUT9 64 aa7.04□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Ebi3O35228 228 aa7.04□□□□□ -1.28
Sptan1-208ENSMUST00000129241 P01820 115 aa7.04□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Higd2aQ9CQJ1 106 aa7.04□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Gm5468Q8C3D3 155 aa7.04□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Trav7-6A0A075B640 112 aa7.04□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Arid1bE9Q4N7 2244 aa7.04□□□□□ -1.28
Sptan1-208ENSMUST00000129241 P06328 117 aa7.04□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Rpl18aP62717 176 aaKnown RBP7.04□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Gm10542F6XDR3 90 aa7.03□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Rbm3O89086 153 aaKnown RBP7.03□□□□□ -1.28
Sptan1-208ENSMUST00000129241 CrygcQ61597 174 aa7.03□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Reg3bP35230 175 aa7.03□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Tmem223Q9CQE2 199 aaKnown RBP7.03□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Sh2d1aO88890 126 aa7.03□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Dnah12Q3V0Q1 3086 aa7.03□□□□□ -1.28
Sptan1-208ENSMUST00000129241 Ndufa4l2Q4FZG9 87 aa7.03□□□□□ -1.28
Sptan1-208ENSMUST00000129241 B230359F08RikA0A0B4J1K3 109 aa7.02□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Klk12B2RVZ0 247 aa7.02□□□□□ -1.29
Sptan1-208ENSMUST00000129241 AW146154Q3TPQ7 468 aa7.02□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Gm3285A0A1W2P7U0 201 aa7.02□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Klk5Q9D140 293 aa7.02□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Igkv1-35A0A0G2JDE5 120 aa7.02□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Igkv3-5A0A140T8M6 119 aa7.02□□□□□ -1.29
Sptan1-208ENSMUST00000129241 PtprbB2RU80 1998 aa7.02□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Spink8Q09TK9 105 aa7.02□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Q9D131 166 aa7.02□□□□□ -1.29
Sptan1-208ENSMUST00000129241 1700012A03RikQ9DAF1 130 aa7.02□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Trav11A0A0B4J1J9 114 aa7.02□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Gm17577J3QNF7 156 aa7.02□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Trav9n-4A0A075B631 113 aa7.02□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Gm10735Q3US96 136 aa7.02□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Camk2n2Q78WH7 79 aa7.02□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Tax1bp3Q9DBG9 124 aa7.02□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Trav13-2A0A075B649 110 aa7.01□□□□□ -1.29
Sptan1-208ENSMUST00000129241 1700010B08RikQ9DAI7 102 aa7.01□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Snai3Q9QY31 287 aa7.01□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Tmem258P61166 79 aa7.01□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Cacna1gQ5SUF7 2381 aa7.01□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Igkv2-109A0A075B5K6 120 aa7.01□□□□□ -1.29
Sptan1-208ENSMUST00000129241 P0C913 63 aa7.01□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Gm14137Q8CE97 175 aa7.01□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Igkv8-18A0A0B4J1J3 123 aa7.01□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Sprr3O09116 238 aa7.01□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Trav13n-2A0A0G2JF93 110 aa7.01□□□□□ -1.29
Sptan1-208ENSMUST00000129241 B9d2Q3UK10 175 aa7.01□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Col6a4A2AX52 2309 aa7□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Fxyd5P97808 178 aa7□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Trav13-1A0A075B644 110 aa7□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Gphb5Q812B2 130 aa7□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Gm17359A0A0G2JEB7 487 aa7□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Gm3618D3Z4P5 127 aa7□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Gm5878E9PUB3 99 aa7□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Fgf6P21658 208 aa7□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Prrc2aQ7TSC1 2158 aaKnown RBP6.99□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Gm44965A0A0N4SVR3 59 aa6.99□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Ighv1-75A0A075B5Y2 117 aa6.99□□□□□ -1.29
Sptan1-208ENSMUST00000129241 CrygdP04342 174 aa6.99□□□□□ -1.29
Sptan1-208ENSMUST00000129241 P84751 237 aa6.99□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Q9CX25 107 aa6.99□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Ighv1-11A0A0A6YWI9 117 aa6.99□□□□□ -1.29
Sptan1-208ENSMUST00000129241 Ighv2-6A0A075B6A7 116 aa6.99□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 84.2 ms