RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Igkv4-74A0A0B4J1I3 119 aa11.84□□□□□ -0.51
Pcdha9-201ENSMUST00000115659 Gm10518F6UQQ9 182 aa11.84□□□□□ -0.51
Pcdha9-201ENSMUST00000115659 Q9D131 166 aa11.84□□□□□ -0.51
Pcdha9-201ENSMUST00000115659 Nup210Q9QY81 1886 aaKnown RBP11.84□□□□□ -0.51
Pcdha9-201ENSMUST00000115659 Sdk2Q6V4S5 2176 aa11.83□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Trav13n-1A0A0G2JEU8 110 aa11.83□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 P01745 121 aa11.83□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 P06328 117 aa11.83□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Ube2bP63147 152 aa11.83□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Igkv1-122A0A140T8M9 119 aa11.83□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 4930546C10RikE9Q4Y3 121 aa11.83□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Gm20726G3UX18 150 aa11.82□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Cox7b2Q9D2H1 82 aa11.82□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Pde6gP09174 87 aa11.82□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Ppp1r32Q148A4 427 aa11.82□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Notch3Q61982 2318 aa11.82□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Gm12353A2AGJ4 60 aa11.81□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 MifP34884 115 aaKnown RBP11.81□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Cryba4Q9JJV0 196 aa11.81□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Gphb5Q812B2 130 aa11.81□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 P01659 112 aa11.81□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Gata1P17679 413 aa11.81□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Tcf20Q9EPQ8 1987 aa11.81□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Prr12E9PYL2 2035 aaKnown RBP11.81□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Ighv1-82A0A0G2JEU7 117 aa11.8□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Trav13d-1A0A075B606 110 aa11.8□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Igkv8-26A0A075B5N5 123 aa11.8□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Trav13d-4A0A0G2JFX3 110 aa11.8□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Sprr3O09116 238 aa11.8□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 PpdpfQ9CR37 115 aa11.79□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Ormdl1Q921I0 153 aa11.79□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Pla2g2dQ9WVF6 144 aa11.79□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Col8a2P25318 699 aa11.79□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 P01820 115 aa11.79□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Tmem254aP0DN89 123 aa11.79□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Tmem254bP0DN90 123 aa11.79□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Tmem254cP0DN91 123 aa11.79□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 CtrlQ9ER05 264 aa11.79□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Ep300B2RWS6 2412 aa11.78□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Camk2n2Q78WH7 79 aa11.78□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Rnase1P00683 149 aa11.78□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Spink8Q09TK9 105 aa11.78□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Ucn2Q99ML8 113 aa11.78□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 F5O88783 2183 aa11.78□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Pip4p1Q3TWL2 284 aa11.78□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Arhgef17Q80U35 2057 aa11.78□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Znf239P24399 201 aa11.77□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 P84751 237 aa11.77□□□□□ -0.52
Pcdha9-201ENSMUST00000115659 Gm17472A0A075B683 117 aa11.77□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 Fgf6P21658 208 aa11.77□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 Gm9913Q8BQQ2 135 aa11.77□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 Gm10251J3QPM5 127 aa11.76□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 Gm2916Q9D9B9 127 aa11.76□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 Plxnb3Q9QY40 1902 aa11.76□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 Gm44965A0A0N4SVR3 59 aa11.76□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 Lmo4P61969 165 aa11.76□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 Triap1Q9D8Z2 76 aa11.76□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 4930470P17RikQ9D542 155 aa11.76□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 Tcte2E9PY37 120 aa11.75□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 Cspg4Q8VHY0 2327 aa11.75□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 Ighv1-61P01749 117 aa11.75□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 Eml6Q5SQM0 1958 aa11.75□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 Ighv1-85A0A075B5Y6 117 aa11.74□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 Trav13-2A0A075B649 110 aa11.74□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 BC107364E9Q5A2 140 aa11.74□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 B9d2Q3UK10 175 aa11.74□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 Gm10542F6XDR3 90 aa11.74□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 Prh1P05142 261 aa11.74□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 Gm5629P06327 117 aa11.73□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 Lypd6Q8BPP5 171 aa11.72□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 HelzQ6DFV5 1964 aaKnown RBP11.72□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 Trav13-4-dv7A0A075B6C2 110 aa11.72□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 Tcl1b3P56842 122 aa11.72□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 Fgfbp3Q1HCM0 245 aa11.71□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 A130051J06RikQ8CAU1 227 aa11.71□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 Med13lQ6JPI3 2207 aa11.71□□□□□ -0.53
Pcdha9-201ENSMUST00000115659 Igkv2-109A0A075B5K6 120 aa11.71□□□□□ -0.54
Pcdha9-201ENSMUST00000115659 E130116L18RikQ8BMV6 101 aa11.71□□□□□ -0.54
Pcdha9-201ENSMUST00000115659 P01747 120 aa11.71□□□□□ -0.54
Pcdha9-201ENSMUST00000115659 Ly6gP35461 111 aa11.71□□□□□ -0.54
Pcdha9-201ENSMUST00000115659 Igkv8-18A0A0B4J1J3 123 aa11.7□□□□□ -0.54
Pcdha9-201ENSMUST00000115659 Trav13n-2A0A0G2JF93 110 aa11.7□□□□□ -0.54
Pcdha9-201ENSMUST00000115659 Trav13-1A0A075B644 110 aa11.7□□□□□ -0.54
Pcdha9-201ENSMUST00000115659 Klk12B2RVZ0 247 aa11.7□□□□□ -0.54
Pcdha9-201ENSMUST00000115659 Ndufc1Q9CQY9 76 aa11.7□□□□□ -0.54
Pcdha9-201ENSMUST00000115659 Igkv1-35A0A0G2JDE5 120 aa11.7□□□□□ -0.54
Pcdha9-201ENSMUST00000115659 Gm17577J3QNF7 156 aa11.7□□□□□ -0.54
Pcdha9-201ENSMUST00000115659 Igkv1-88A0A140T8N1 120 aa11.69□□□□□ -0.54
Pcdha9-201ENSMUST00000115659 Brk1Q91VR8 75 aa11.69□□□□□ -0.54
Pcdha9-201ENSMUST00000115659 Timm17bQ9Z0V7 172 aa11.69□□□□□ -0.54
Pcdha9-201ENSMUST00000115659 Gm10735Q3US96 136 aa11.69□□□□□ -0.54
Pcdha9-201ENSMUST00000115659 Rnf185Q91YT2 192 aa11.69□□□□□ -0.54
Pcdha9-201ENSMUST00000115659 Klk5Q9D140 293 aa11.69□□□□□ -0.54
Pcdha9-201ENSMUST00000115659 Gm37389A0A0A6YW05 95 aa11.69□□□□□ -0.54
Pcdha9-201ENSMUST00000115659 Fam222aQ6PGH4 453 aa11.68□□□□□ -0.54
Pcdha9-201ENSMUST00000115659 Ighv2-6-8A0A0A6YWY9 116 aa11.68□□□□□ -0.54
Pcdha9-201ENSMUST00000115659 Ighv2-3A0A075B696 115 aa11.68□□□□□ -0.54
Pcdha9-201ENSMUST00000115659 Tet1Q3URK3 2007 aaKnown RBP11.68□□□□□ -0.54
Pcdha9-201ENSMUST00000115659 Trav9n-4A0A075B631 113 aa11.68□□□□□ -0.54
Pcdha9-201ENSMUST00000115659 B230359F08RikA0A0B4J1K3 109 aa11.68□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms